data_7YBO # _model_server_result.job_id DI39SvsVX9xETu6CJD3cDQ _model_server_result.datetime_utc '2024-12-20 16:51:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ybo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":807}' # _entry.id 7YBO # _exptl.entry_id 7YBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.93 _cell.angle_gamma 90 _cell.entry_id 7YBO _cell.length_a 40.075 _cell.length_b 60.44 _cell.length_c 59.899 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 110 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 552 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CAJ _struct_conn.ptnr2_label_comp_id IH7 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id IH7 _struct_conn.ptnr2_auth_seq_id 801 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.662 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 360 n n S O2 SO4 doub 361 n n S O3 SO4 sing 362 n n S O4 SO4 sing 363 n n # _atom_sites.entry_id 7YBO _atom_sites.fract_transf_matrix[1][1] 0.024953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002151 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016545 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016757 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IH7 A 1 801 800 IH7 DRG . C 3 SO4 A 1 802 900 SO4 SO4 . D 3 SO4 A 1 803 901 SO4 SO4 . E 3 SO4 A 1 804 902 SO4 SO4 . F 3 SO4 A 1 805 903 SO4 SO4 . G 3 SO4 A 1 806 904 SO4 SO4 . H 3 SO4 A 1 807 905 SO4 SO4 . I 4 HOH A 1 901 58 HOH HOH . I 4 HOH A 2 902 41 HOH HOH . I 4 HOH A 3 903 54 HOH HOH . I 4 HOH A 4 904 44 HOH HOH . I 4 HOH A 5 905 48 HOH HOH . I 4 HOH A 6 906 20 HOH HOH . I 4 HOH A 7 907 4 HOH HOH . I 4 HOH A 8 908 32 HOH HOH . I 4 HOH A 9 909 57 HOH HOH . I 4 HOH A 10 910 17 HOH HOH . I 4 HOH A 11 911 9 HOH HOH . I 4 HOH A 12 912 56 HOH HOH . I 4 HOH A 13 913 13 HOH HOH . I 4 HOH A 14 914 18 HOH HOH . I 4 HOH A 15 915 22 HOH HOH . I 4 HOH A 16 916 6 HOH HOH . I 4 HOH A 17 917 15 HOH HOH . I 4 HOH A 18 918 50 HOH HOH . I 4 HOH A 19 919 26 HOH HOH . I 4 HOH A 20 920 40 HOH HOH . I 4 HOH A 21 921 55 HOH HOH . I 4 HOH A 22 922 8 HOH HOH . I 4 HOH A 23 923 11 HOH HOH . I 4 HOH A 24 924 1 HOH HOH . I 4 HOH A 25 925 12 HOH HOH . I 4 HOH A 26 926 7 HOH HOH . I 4 HOH A 27 927 38 HOH HOH . I 4 HOH A 28 928 29 HOH HOH . I 4 HOH A 29 929 16 HOH HOH . I 4 HOH A 30 930 3 HOH HOH . I 4 HOH A 31 931 61 HOH HOH . I 4 HOH A 32 932 5 HOH HOH . I 4 HOH A 33 933 19 HOH HOH . I 4 HOH A 34 934 25 HOH HOH . I 4 HOH A 35 935 21 HOH HOH . I 4 HOH A 36 936 46 HOH HOH . I 4 HOH A 37 937 34 HOH HOH . I 4 HOH A 38 938 23 HOH HOH . I 4 HOH A 39 939 39 HOH HOH . I 4 HOH A 40 940 52 HOH HOH . I 4 HOH A 41 941 49 HOH HOH . I 4 HOH A 42 942 10 HOH HOH . I 4 HOH A 43 943 27 HOH HOH . I 4 HOH A 44 944 28 HOH HOH . I 4 HOH A 45 945 31 HOH HOH . I 4 HOH A 46 946 37 HOH HOH . I 4 HOH A 47 947 35 HOH HOH . I 4 HOH A 48 948 36 HOH HOH . I 4 HOH A 49 949 51 HOH HOH . I 4 HOH A 50 950 30 HOH HOH . I 4 HOH A 51 951 42 HOH HOH . I 4 HOH A 52 952 47 HOH HOH . I 4 HOH A 53 953 14 HOH HOH . I 4 HOH A 54 954 43 HOH HOH . I 4 HOH A 55 955 33 HOH HOH . I 4 HOH A 56 956 2 HOH HOH . I 4 HOH A 57 957 53 HOH HOH . I 4 HOH A 58 958 59 HOH HOH . I 4 HOH A 59 959 24 HOH HOH . I 4 HOH A 60 960 45 HOH HOH . I 4 HOH A 61 961 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 3 235.367 -6.643 124.123 1 63.95 ? S SO4 807 A 1 HETATM 2 O O1 SO4 . . . H 3 235.481 -7.009 122.714 1 50.98 ? O1 SO4 807 A 1 HETATM 3 O O2 SO4 . . . H 3 235.634 -5.213 124.274 1 59.58 ? O2 SO4 807 A 1 HETATM 4 O O3 SO4 . . . H 3 236.335 -7.407 124.907 1 57.47 ? O3 SO4 807 A 1 HETATM 5 O O4 SO4 . . . H 3 234.016 -6.937 124.593 1 54.85 ? O4 SO4 807 A 1 # _model_server_stats.io_time_ms 117 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #