data_7YC1 # _model_server_result.job_id sCufMvAFvzYEH1178tBpPw _model_server_result.datetime_utc '2024-12-20 16:56:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yc1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 7YC1 # _exptl.entry_id 7YC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.438 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[5-cyano-4-(2-methoxyethylamino)pyridin-2-yl]-5-methanoyl-1-propyl-pyrrolo[3,2-b]pyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.82 _cell.angle_gamma 90 _cell.entry_id 7YC1 _cell.length_a 42.153 _cell.length_b 60.977 _cell.length_c 60.488 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 110 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 552 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CAJ _struct_conn.ptnr2_label_comp_id IIQ _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id IIQ _struct_conn.ptnr2_auth_seq_id 801 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.644 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H22 N6 O3' _chem_comp.formula_weight 406.438 _chem_comp.id IIQ _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[5-cyano-4-(2-methoxyethylamino)pyridin-2-yl]-5-methanoyl-1-propyl-pyrrolo[3,2-b]pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAZ OAY IIQ sing 165 n n OAY CAX IIQ sing 166 n n CAX CAW IIQ sing 167 n n NBD CBC IIQ trip 168 n n CBC CAQ IIQ sing 169 n n CAW NAT IIQ sing 170 n n NAT CAP IIQ sing 171 n n CAQ CAP IIQ doub 172 n y CAQ CAR IIQ sing 173 n y CAP CAO IIQ sing 174 n y CAR NAS IIQ doub 175 n y CAO CAN IIQ doub 176 n y NAS CAN IIQ sing 177 n y CAN NAM IIQ sing 178 n n OAL CAK IIQ doub 179 n n NAM CAK IIQ sing 180 n n CAK CAI IIQ sing 181 n n CAI CAH IIQ doub 182 n y CAI CAE IIQ sing 183 n y CAH NAG IIQ sing 184 n y CAE NAF IIQ doub 185 n y CAE CAD IIQ sing 186 n y NAF CAA IIQ sing 187 n y NAG CAD IIQ sing 188 n y NAG CAU IIQ sing 189 n n CAV CBA IIQ sing 190 n n CAV CAU IIQ sing 191 n n CAD CAC IIQ doub 192 n y CAA CAJ IIQ sing 193 n n CAA CAB IIQ doub 194 n y CAJ OBB IIQ doub 195 n n CAC CAB IIQ sing 196 n y CBA H1 IIQ sing 197 n n CBA H2 IIQ sing 198 n n CBA H3 IIQ sing 199 n n CAV H4 IIQ sing 200 n n CAV H5 IIQ sing 201 n n CAU H6 IIQ sing 202 n n CAU H7 IIQ sing 203 n n CAH H8 IIQ sing 204 n n CAC H9 IIQ sing 205 n n CAB H10 IIQ sing 206 n n CAJ H11 IIQ sing 207 n n NAM H14 IIQ sing 208 n n CAO H15 IIQ sing 209 n n CAR H16 IIQ sing 210 n n NAT H17 IIQ sing 211 n n CAW H18 IIQ sing 212 n n CAW H19 IIQ sing 213 n n CAX H20 IIQ sing 214 n n CAX H21 IIQ sing 215 n n CAZ H22 IIQ sing 216 n n CAZ H23 IIQ sing 217 n n CAZ H24 IIQ sing 218 n n # _atom_sites.entry_id 7YC1 _atom_sites.fract_transf_matrix[1][1] 0.023723 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003259 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IIQ A 1 801 800 IIQ DRG . C 3 SO4 A 1 802 900 SO4 SO4 . D 3 SO4 A 1 803 901 SO4 SO4 . E 3 SO4 A 1 804 902 SO4 SO4 . F 4 GOL A 1 805 1000 GOL GOL . G 5 HOH A 1 901 38 HOH HOH . G 5 HOH A 2 902 40 HOH HOH . G 5 HOH A 3 903 2 HOH HOH . G 5 HOH A 4 904 45 HOH HOH . G 5 HOH A 5 905 16 HOH HOH . G 5 HOH A 6 906 39 HOH HOH . G 5 HOH A 7 907 56 HOH HOH . G 5 HOH A 8 908 67 HOH HOH . G 5 HOH A 9 909 57 HOH HOH . G 5 HOH A 10 910 46 HOH HOH . G 5 HOH A 11 911 32 HOH HOH . G 5 HOH A 12 912 63 HOH HOH . G 5 HOH A 13 913 11 HOH HOH . G 5 HOH A 14 914 61 HOH HOH . G 5 HOH A 15 915 7 HOH HOH . G 5 HOH A 16 916 65 HOH HOH . G 5 HOH A 17 917 64 HOH HOH . G 5 HOH A 18 918 5 HOH HOH . G 5 HOH A 19 919 13 HOH HOH . G 5 HOH A 20 920 23 HOH HOH . G 5 HOH A 21 921 9 HOH HOH . G 5 HOH A 22 922 51 HOH HOH . G 5 HOH A 23 923 41 HOH HOH . G 5 HOH A 24 924 70 HOH HOH . G 5 HOH A 25 925 30 HOH HOH . G 5 HOH A 26 926 21 HOH HOH . G 5 HOH A 27 927 62 HOH HOH . G 5 HOH A 28 928 37 HOH HOH . G 5 HOH A 29 929 34 HOH HOH . G 5 HOH A 30 930 10 HOH HOH . G 5 HOH A 31 931 59 HOH HOH . G 5 HOH A 32 932 66 HOH HOH . G 5 HOH A 33 933 35 HOH HOH . G 5 HOH A 34 934 48 HOH HOH . G 5 HOH A 35 935 1 HOH HOH . G 5 HOH A 36 936 22 HOH HOH . G 5 HOH A 37 937 14 HOH HOH . G 5 HOH A 38 938 15 HOH HOH . G 5 HOH A 39 939 54 HOH HOH . G 5 HOH A 40 940 8 HOH HOH . G 5 HOH A 41 941 47 HOH HOH . G 5 HOH A 42 942 6 HOH HOH . G 5 HOH A 43 943 42 HOH HOH . G 5 HOH A 44 944 55 HOH HOH . G 5 HOH A 45 945 24 HOH HOH . G 5 HOH A 46 946 33 HOH HOH . G 5 HOH A 47 947 26 HOH HOH . G 5 HOH A 48 948 50 HOH HOH . G 5 HOH A 49 949 12 HOH HOH . G 5 HOH A 50 950 78 HOH HOH . G 5 HOH A 51 951 36 HOH HOH . G 5 HOH A 52 952 18 HOH HOH . G 5 HOH A 53 953 29 HOH HOH . G 5 HOH A 54 954 28 HOH HOH . G 5 HOH A 55 955 17 HOH HOH . G 5 HOH A 56 956 77 HOH HOH . G 5 HOH A 57 957 60 HOH HOH . G 5 HOH A 58 958 19 HOH HOH . G 5 HOH A 59 959 76 HOH HOH . G 5 HOH A 60 960 20 HOH HOH . G 5 HOH A 61 961 25 HOH HOH . G 5 HOH A 62 962 31 HOH HOH . G 5 HOH A 63 963 52 HOH HOH . G 5 HOH A 64 964 4 HOH HOH . G 5 HOH A 65 965 68 HOH HOH . G 5 HOH A 66 966 49 HOH HOH . G 5 HOH A 67 967 44 HOH HOH . G 5 HOH A 68 968 27 HOH HOH . G 5 HOH A 69 969 74 HOH HOH . G 5 HOH A 70 970 3 HOH HOH . G 5 HOH A 71 971 71 HOH HOH . G 5 HOH A 72 972 53 HOH HOH . G 5 HOH A 73 973 69 HOH HOH . G 5 HOH A 74 974 43 HOH HOH . G 5 HOH A 75 975 58 HOH HOH . G 5 HOH A 76 976 72 HOH HOH . G 5 HOH A 77 977 73 HOH HOH . G 5 HOH A 78 978 79 HOH HOH . G 5 HOH A 79 979 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBA IIQ . . . B 2 200.887 12.791 148.228 1 48.24 ? CBA IIQ 801 A 1 HETATM 2 C CAV IIQ . . . B 2 201.083 11.387 147.654 1 47.09 ? CAV IIQ 801 A 1 HETATM 3 C CAU IIQ . . . B 2 202.25 10.704 148.367 1 41.1 ? CAU IIQ 801 A 1 HETATM 4 N NAG IIQ . . . B 2 203.398 10.513 147.452 1 35.77 ? NAG IIQ 801 A 1 HETATM 5 C CAH IIQ . . . B 2 203.333 10.277 146.141 1 31.01 ? CAH IIQ 801 A 1 HETATM 6 C CAD IIQ . . . B 2 204.68 10.55 147.82 1 30.79 ? CAD IIQ 801 A 1 HETATM 7 C CAC IIQ . . . B 2 205.251 10.754 149.005 1 27.07 ? CAC IIQ 801 A 1 HETATM 8 C CAB IIQ . . . B 2 206.635 10.741 149.115 1 30.98 ? CAB IIQ 801 A 1 HETATM 9 C CAA IIQ . . . B 2 207.387 10.516 147.971 1 34.38 ? CAA IIQ 801 A 1 HETATM 10 C CAJ IIQ . . . B 2 208.776 10.497 148.035 1 41.5 ? CAJ IIQ 801 A 1 HETATM 11 O OBB IIQ . . . B 2 209.228 11.504 148.945 1 46.27 ? OBB IIQ 801 A 1 HETATM 12 N NAF IIQ . . . B 2 206.764 10.318 146.803 1 26.98 ? NAF IIQ 801 A 1 HETATM 13 C CAE IIQ . . . B 2 205.425 10.335 146.736 1 26.16 ? CAE IIQ 801 A 1 HETATM 14 C CAI IIQ . . . B 2 204.588 10.179 145.72 1 27.74 ? CAI IIQ 801 A 1 HETATM 15 C CAK IIQ . . . B 2 204.974 9.931 144.471 1 29.48 ? CAK IIQ 801 A 1 HETATM 16 O OAL IIQ . . . B 2 204.151 9.906 143.554 1 23.9 ? OAL IIQ 801 A 1 HETATM 17 N NAM IIQ . . . B 2 206.304 9.716 144.376 1 32.33 ? NAM IIQ 801 A 1 HETATM 18 C CAN IIQ . . . B 2 206.936 9.396 143.238 1 30.96 ? CAN IIQ 801 A 1 HETATM 19 C CAO IIQ . . . B 2 206.329 8.691 142.198 1 31.77 ? CAO IIQ 801 A 1 HETATM 20 N NAS IIQ . . . B 2 208.234 9.731 143.139 1 25.82 ? NAS IIQ 801 A 1 HETATM 21 C CAR IIQ . . . B 2 208.988 9.421 142 1 25.46 ? CAR IIQ 801 A 1 HETATM 22 C CAQ IIQ . . . B 2 208.396 8.732 140.953 1 27.56 ? CAQ IIQ 801 A 1 HETATM 23 C CBC IIQ . . . B 2 209.147 8.407 139.78 1 26.82 ? CBC IIQ 801 A 1 HETATM 24 N NBD IIQ . . . B 2 209.745 8.147 138.848 1 27.18 ? NBD IIQ 801 A 1 HETATM 25 C CAP IIQ . . . B 2 207.06 8.375 141.059 1 32.53 ? CAP IIQ 801 A 1 HETATM 26 N NAT IIQ . . . B 2 206.535 7.721 140.027 1 35.96 ? NAT IIQ 801 A 1 HETATM 27 C CAW IIQ . . . B 2 205.083 7.59 139.832 1 35.69 ? CAW IIQ 801 A 1 HETATM 28 C CAX IIQ . . . B 2 204.751 7.807 138.353 1 38.83 ? CAX IIQ 801 A 1 HETATM 29 O OAY IIQ . . . B 2 204.551 9.201 138.101 1 36.22 ? OAY IIQ 801 A 1 HETATM 30 C CAZ IIQ . . . B 2 204.596 9.442 136.691 1 30.92 ? CAZ IIQ 801 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #