data_7YCE # _model_server_result.job_id TJt6CEPOwSrbWoe7I61ABA _model_server_result.datetime_utc '2024-11-05 21:01:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yce # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7YCE # _exptl.entry_id 7YCE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 620.16 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[7-[6-chloranyl-2-(1-ethylpiperidin-4-yl)oxy-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)quinazolin-4-yl]-2,7-diazaspiro[3.5]nonan-2-yl]propan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7YCE _cell.length_a 94.809 _cell.length_b 94.809 _cell.length_c 119.41 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 18 A SER 17 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc2 B O2B GDP . A GDP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? # _chem_comp.formula 'C33 H39 Cl F N7 O2' _chem_comp.formula_weight 620.16 _chem_comp.id IQN _chem_comp.mon_nstd_flag . _chem_comp.name 1-[7-[6-chloranyl-2-(1-ethylpiperidin-4-yl)oxy-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)quinazolin-4-yl]-2,7-diazaspiro[3.5]nonan-2-yl]propan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C41 C42 IQN sing 218 n n C41 N40 IQN sing 219 n n C43 N40 IQN sing 220 n n C43 C44 IQN sing 221 n n C1 C2 IQN sing 222 n n N40 C39 IQN sing 223 n n C44 C37 IQN sing 224 n n C2 C3 IQN sing 225 n y C2 C10 IQN doub 226 n y C3 C4 IQN doub 227 n y C39 C38 IQN sing 228 n n F13 C12 IQN sing 229 n n C10 C11 IQN sing 230 n n C10 C9 IQN sing 231 n y C34 C35 IQN sing 232 n n C34 C26 IQN sing 233 n n C4 C5 IQN sing 234 n y C12 C11 IQN doub 235 n y C12 C14 IQN sing 236 n y C11 C21 IQN sing 237 n y C37 C38 IQN sing 238 n n C37 O36 IQN sing 239 n n N15 C14 IQN sing 240 n y N15 C16 IQN doub 241 n y C14 C19 IQN doub 242 n y C27 C26 IQN sing 243 n n C27 N28 IQN sing 244 n n O32 C29 IQN doub 245 n n O36 C16 IQN sing 246 n n C21 CL1 IQN sing 247 n n C21 C20 IQN doub 248 n y C16 N17 IQN sing 249 n y C19 C20 IQN sing 250 n y C19 C18 IQN sing 251 n y N17 C18 IQN doub 252 n y C35 N23 IQN sing 253 n n C18 N23 IQN sing 254 n n N23 C24 IQN sing 255 n n C26 C25 IQN sing 256 n n C26 C33 IQN sing 257 n n C9 C5 IQN doub 258 n y C9 C8 IQN sing 259 n y C29 N28 IQN sing 260 n n C29 C30 IQN sing 261 n n C5 N6 IQN sing 262 n y N28 C33 IQN sing 263 n n C25 C24 IQN sing 264 n n C31 C30 IQN sing 265 n n C8 N7 IQN doub 266 n y N6 N7 IQN sing 267 n y C3 H1 IQN sing 268 n n C4 H2 IQN sing 269 n n C20 H3 IQN sing 270 n n C8 H4 IQN sing 271 n n C31 H5 IQN sing 272 n n C31 H6 IQN sing 273 n n C31 H7 IQN sing 274 n n C30 H8 IQN sing 275 n n C30 H9 IQN sing 276 n n C38 H10 IQN sing 277 n n C38 H11 IQN sing 278 n n C44 H12 IQN sing 279 n n C44 H13 IQN sing 280 n n C25 H14 IQN sing 281 n n C25 H15 IQN sing 282 n n C34 H16 IQN sing 283 n n C34 H17 IQN sing 284 n n C39 H18 IQN sing 285 n n C39 H19 IQN sing 286 n n C43 H20 IQN sing 287 n n C43 H21 IQN sing 288 n n C27 H22 IQN sing 289 n n C27 H23 IQN sing 290 n n C33 H24 IQN sing 291 n n C33 H25 IQN sing 292 n n C24 H26 IQN sing 293 n n C24 H27 IQN sing 294 n n C35 H28 IQN sing 295 n n C35 H29 IQN sing 296 n n C37 H30 IQN sing 297 n n C1 H31 IQN sing 298 n n C1 H32 IQN sing 299 n n C1 H33 IQN sing 300 n n C42 H34 IQN sing 301 n n C42 H35 IQN sing 302 n n C42 H36 IQN sing 303 n n C41 H37 IQN sing 304 n n C41 H38 IQN sing 305 n n N6 H39 IQN sing 306 n n # _atom_sites.entry_id 7YCE _atom_sites.fract_transf_matrix[1][1] 0.010548 _atom_sites.fract_transf_matrix[1][2] 0.00609 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012179 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008375 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 201 201 GDP GDP . C 3 MG A 1 202 202 MG MG . D 4 SO4 A 1 203 203 SO4 SO4 . E 5 IQN A 1 204 301 IQN UNL . F 6 HOH A 1 301 99 HOH HOH . F 6 HOH A 2 302 29 HOH HOH . F 6 HOH A 3 303 66 HOH HOH . F 6 HOH A 4 304 24 HOH HOH . F 6 HOH A 5 305 18 HOH HOH . F 6 HOH A 6 306 22 HOH HOH . F 6 HOH A 7 307 61 HOH HOH . F 6 HOH A 8 308 97 HOH HOH . F 6 HOH A 9 309 47 HOH HOH . F 6 HOH A 10 310 49 HOH HOH . F 6 HOH A 11 311 3 HOH HOH . F 6 HOH A 12 312 35 HOH HOH . F 6 HOH A 13 313 6 HOH HOH . F 6 HOH A 14 314 52 HOH HOH . F 6 HOH A 15 315 76 HOH HOH . F 6 HOH A 16 316 40 HOH HOH . F 6 HOH A 17 317 25 HOH HOH . F 6 HOH A 18 318 82 HOH HOH . F 6 HOH A 19 319 28 HOH HOH . F 6 HOH A 20 320 14 HOH HOH . F 6 HOH A 21 321 60 HOH HOH . F 6 HOH A 22 322 36 HOH HOH . F 6 HOH A 23 323 75 HOH HOH . F 6 HOH A 24 324 93 HOH HOH . F 6 HOH A 25 325 92 HOH HOH . F 6 HOH A 26 326 27 HOH HOH . F 6 HOH A 27 327 5 HOH HOH . F 6 HOH A 28 328 34 HOH HOH . F 6 HOH A 29 329 4 HOH HOH . F 6 HOH A 30 330 2 HOH HOH . F 6 HOH A 31 331 1 HOH HOH . F 6 HOH A 32 332 13 HOH HOH . F 6 HOH A 33 333 58 HOH HOH . F 6 HOH A 34 334 12 HOH HOH . F 6 HOH A 35 335 31 HOH HOH . F 6 HOH A 36 336 41 HOH HOH . F 6 HOH A 37 337 96 HOH HOH . F 6 HOH A 38 338 10 HOH HOH . F 6 HOH A 39 339 7 HOH HOH . F 6 HOH A 40 340 78 HOH HOH . F 6 HOH A 41 341 51 HOH HOH . F 6 HOH A 42 342 68 HOH HOH . F 6 HOH A 43 343 30 HOH HOH . F 6 HOH A 44 344 59 HOH HOH . F 6 HOH A 45 345 15 HOH HOH . F 6 HOH A 46 346 16 HOH HOH . F 6 HOH A 47 347 8 HOH HOH . F 6 HOH A 48 348 83 HOH HOH . F 6 HOH A 49 349 32 HOH HOH . F 6 HOH A 50 350 23 HOH HOH . F 6 HOH A 51 351 64 HOH HOH . F 6 HOH A 52 352 69 HOH HOH . F 6 HOH A 53 353 77 HOH HOH . F 6 HOH A 54 354 85 HOH HOH . F 6 HOH A 55 355 19 HOH HOH . F 6 HOH A 56 356 79 HOH HOH . F 6 HOH A 57 357 70 HOH HOH . F 6 HOH A 58 358 95 HOH HOH . F 6 HOH A 59 359 56 HOH HOH . F 6 HOH A 60 360 20 HOH HOH . F 6 HOH A 61 361 74 HOH HOH . F 6 HOH A 62 362 71 HOH HOH . F 6 HOH A 63 363 62 HOH HOH . F 6 HOH A 64 364 38 HOH HOH . F 6 HOH A 65 365 45 HOH HOH . F 6 HOH A 66 366 87 HOH HOH . F 6 HOH A 67 367 11 HOH HOH . F 6 HOH A 68 368 46 HOH HOH . F 6 HOH A 69 369 73 HOH HOH . F 6 HOH A 70 370 86 HOH HOH . F 6 HOH A 71 371 63 HOH HOH . F 6 HOH A 72 372 55 HOH HOH . F 6 HOH A 73 373 94 HOH HOH . F 6 HOH A 74 374 48 HOH HOH . F 6 HOH A 75 375 88 HOH HOH . F 6 HOH A 76 376 42 HOH HOH . F 6 HOH A 77 377 21 HOH HOH . F 6 HOH A 78 378 65 HOH HOH . F 6 HOH A 79 379 39 HOH HOH . F 6 HOH A 80 380 53 HOH HOH . F 6 HOH A 81 381 9 HOH HOH . F 6 HOH A 82 382 37 HOH HOH . F 6 HOH A 83 383 90 HOH HOH . F 6 HOH A 84 384 26 HOH HOH . F 6 HOH A 85 385 50 HOH HOH . F 6 HOH A 86 386 98 HOH HOH . F 6 HOH A 87 387 44 HOH HOH . F 6 HOH A 88 388 91 HOH HOH . F 6 HOH A 89 389 89 HOH HOH . F 6 HOH A 90 390 84 HOH HOH . F 6 HOH A 91 391 67 HOH HOH . F 6 HOH A 92 392 54 HOH HOH . F 6 HOH A 93 393 80 HOH HOH . F 6 HOH A 94 394 43 HOH HOH . F 6 HOH A 95 395 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 IQN . . . E 5 -20.731 3.611 -19.748 1 35.29 ? C3 IQN 204 A 1 HETATM 2 C C4 IQN . . . E 5 -21.454 3.228 -18.64 1 35.66 ? C4 IQN 204 A 1 HETATM 3 C C20 IQN . . . E 5 -15.194 5.131 -18.306 1 26.83 ? C20 IQN 204 A 1 HETATM 4 C C8 IQN . . . E 5 -18.761 2.843 -16.349 1 41.75 ? C8 IQN 204 A 1 HETATM 5 C C19 IQN . . . E 5 -14.372 4.017 -18.32 1 26.04 ? C19 IQN 204 A 1 HETATM 6 C C9 IQN . . . E 5 -19.267 3.159 -17.596 1 35.72 ? C9 IQN 204 A 1 HETATM 7 C C10 IQN . . . E 5 -18.54 3.564 -18.7 1 32.82 ? C10 IQN 204 A 1 HETATM 8 C C11 IQN . . . E 5 -17.111 3.754 -18.609 1 29.01 ? C11 IQN 204 A 1 HETATM 9 C C2 IQN . . . E 5 -19.36 3.783 -19.786 1 32.98 ? C2 IQN 204 A 1 HETATM 10 C C14 IQN . . . E 5 -14.911 2.768 -18.501 1 25.03 ? C14 IQN 204 A 1 HETATM 11 C C5 IQN . . . E 5 -20.674 2.992 -17.526 1 38.55 ? C5 IQN 204 A 1 HETATM 12 C C12 IQN . . . E 5 -16.278 2.658 -18.631 1 25.99 ? C12 IQN 204 A 1 HETATM 13 C C21 IQN . . . E 5 -16.56 5.011 -18.448 1 27.35 ? C21 IQN 204 A 1 HETATM 14 C C18 IQN . . . E 5 -12.993 4.036 -18.172 1 25 ? C18 IQN 204 A 1 HETATM 15 C C16 IQN . . . E 5 -12.815 1.809 -18.411 1 27.09 ? C16 IQN 204 A 1 HETATM 16 C C31 IQN . . . E 5 -6.926 10.395 -16.885 1 21.06 ? C31 IQN 204 A 1 HETATM 17 C C30 IQN . . . E 5 -8.346 10.69 -16.383 1 21.45 ? C30 IQN 204 A 1 HETATM 18 C C29 IQN . . . E 5 -9.333 10.581 -17.555 1 20.45 ? C29 IQN 204 A 1 HETATM 19 C C38 IQN . . . E 5 -10.248 -0.834 -18.527 1 27.73 ? C38 IQN 204 A 1 HETATM 20 C C44 IQN . . . E 5 -10.241 1.201 -19.907 1 28.7 ? C44 IQN 204 A 1 HETATM 21 C C25 IQN . . . E 5 -12.62 7.462 -17.246 1 21.73 ? C25 IQN 204 A 1 HETATM 22 C C34 IQN . . . E 5 -10.583 6.729 -18.644 1 21.18 ? C34 IQN 204 A 1 HETATM 23 C C39 IQN . . . E 5 -10.656 -1.698 -19.705 1 28.16 ? C39 IQN 204 A 1 HETATM 24 C C43 IQN . . . E 5 -10.658 0.373 -21.1 1 31.04 ? C43 IQN 204 A 1 HETATM 25 C C27 IQN . . . E 5 -11.252 9.183 -18.495 1 19.51 ? C27 IQN 204 A 1 HETATM 26 C C33 IQN . . . E 5 -10.315 8.358 -16.728 1 21.47 ? C33 IQN 204 A 1 HETATM 27 C C24 IQN . . . E 5 -12.661 6.03 -16.734 1 21.98 ? C24 IQN 204 A 1 HETATM 28 C C35 IQN . . . E 5 -10.835 5.303 -18.193 1 22.63 ? C35 IQN 204 A 1 HETATM 29 C C37 IQN . . . E 5 -10.711 0.61 -18.601 1 29.07 ? C37 IQN 204 A 1 HETATM 30 C C26 IQN . . . E 5 -11.259 7.817 -17.814 1 21.11 ? C26 IQN 204 A 1 HETATM 31 C C1 IQN . . . E 5 -18.742 4.218 -21.07 1 32.33 ? C1 IQN 204 A 1 HETATM 32 C C42 IQN . . . E 5 -10.269 -3.276 -21.908 1 36.04 ? C42 IQN 204 A 1 HETATM 33 C C41 IQN . . . E 5 -10.488 -1.801 -22.189 1 33.8 ? C41 IQN 204 A 1 HETATM 34 N N7 IQN . . . E 5 -19.862 2.518 -15.613 1 44.02 ? N7 IQN 204 A 1 HETATM 35 N N15 IQN . . . E 5 -14.135 1.681 -18.547 1 25.44 ? N15 IQN 204 A 1 HETATM 36 N N17 IQN . . . E 5 -12.185 2.97 -18.212 1 26.18 ? N17 IQN 204 A 1 HETATM 37 N N6 IQN . . . E 5 -21.018 2.602 -16.294 1 41.82 ? N6 IQN 204 A 1 HETATM 38 N N28 IQN . . . E 5 -10.301 9.61 -17.468 1 20.72 ? N28 IQN 204 A 1 HETATM 39 N N40 IQN . . . E 5 -10.193 -1.039 -20.954 1 31.4 ? N40 IQN 204 A 1 HETATM 40 N N23 IQN . . . E 5 -12.296 5.277 -17.957 1 24.72 ? N23 IQN 204 A 1 HETATM 41 O O32 IQN . . . E 5 -9.282 11.356 -18.484 1 19.74 ? O32 IQN 204 A 1 HETATM 42 O O36 IQN . . . E 5 -12.14 0.594 -18.474 1 30.25 ? O36 IQN 204 A 1 HETATM 43 F F13 IQN . . . E 5 -16.822 1.452 -18.833 1 22.93 ? F13 IQN 204 A 1 HETATM 44 CL CL1 IQN . . . E 5 -17.571 6.429 -18.431 1 27.39 ? CL1 IQN 204 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #