data_7YDQ
#
_model_server_result.job_id            pahpyQNgdA2n9bNQY7xuUQ 
_model_server_result.datetime_utc      '2024-10-18 16:32:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ydq 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    7YDQ 
#
_exptl.entry_id    7YDQ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              341.404 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-methyl-N-[2-(2-oxidanylideneazepan-1-yl)ethyl]-2-phenyl-1,3-oxazole-4-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7YDQ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YDQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C19 H23 N3 O3' 
_chem_comp.formula_weight    341.404 
_chem_comp.id                IRX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-methyl-N-[2-(2-oxidanylideneazepan-1-yl)ethyl]-2-phenyl-1,3-oxazole-4-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C20 C17 IRX sing 171 n n 
O2 C17 IRX sing 172 n y 
O2 C18 IRX sing 173 n y 
C17 C16 IRX doub 174 n y 
C21 C23 IRX doub 175 n y 
C21 C19 IRX sing 176 n y 
C23 C25 IRX sing 177 n y 
C18 C19 IRX sing 178 n n 
C18 N6 IRX doub 179 n y 
C19 C22 IRX doub 180 n y 
C16 N6 IRX sing 181 n y 
C16 C15 IRX sing 182 n n 
C25 C24 IRX doub 183 n y 
N5 C15 IRX sing 184 n n 
N5 C14 IRX sing 185 n n 
C15 O3 IRX doub 186 n n 
C22 C24 IRX sing 187 n y 
C14 C12 IRX sing 188 n n 
O1 C13 IRX doub 189 n n 
C12 N4 IRX sing 190 n n 
C13 N4 IRX sing 191 n n 
C13 C11 IRX sing 192 n n 
N4 C9 IRX sing 193 n n 
C11 C10 IRX sing 194 n n 
C10 C8 IRX sing 195 n n 
C8 C7 IRX sing 196 n n 
C9 C7 IRX sing 197 n n 
C10 H1 IRX sing 198 n n 
C10 H2 IRX sing 199 n n 
C20 H3 IRX sing 200 n n 
C20 H4 IRX sing 201 n n 
C20 H5 IRX sing 202 n n 
C21 H6 IRX sing 203 n n 
C22 H7 IRX sing 204 n n 
C24 H8 IRX sing 205 n n 
C7 H9 IRX sing 206 n n 
C7 H10 IRX sing 207 n n 
C8 H11 IRX sing 208 n n 
C8 H12 IRX sing 209 n n 
C9 H13 IRX sing 210 n n 
C9 H14 IRX sing 211 n n 
C11 H15 IRX sing 212 n n 
C11 H16 IRX sing 213 n n 
C12 H17 IRX sing 214 n n 
C12 H18 IRX sing 215 n n 
C14 H19 IRX sing 216 n n 
C14 H20 IRX sing 217 n n 
C23 H21 IRX sing 218 n n 
C25 H22 IRX sing 219 n n 
N5 H23 IRX sing 220 n n 
#
_atom_sites.entry_id                     7YDQ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           IRX 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      701 
_pdbx_nonpoly_scheme.auth_seq_num     701 
_pdbx_nonpoly_scheme.pdb_mon_id       IRX 
_pdbx_nonpoly_scheme.auth_mon_id      IRX 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 IRX . . . B 2 110.509 107.636 117.423 1 94.51 ? C10 IRX 701 A 1 
HETATM 2 C C13 IRX . . . B 2 109.253 106.639 115.802 1 94.51 ? C13 IRX 701 A 1 
HETATM 3 C C15 IRX . . . B 2 104.193 108.002 113.846 1 94.51 ? C15 IRX 701 A 1 
HETATM 4 C C17 IRX . . . B 2 102.407 108.078 111.724 1 94.51 ? C17 IRX 701 A 1 
HETATM 5 C C20 IRX . . . B 2 103.128 108.773 110.579 1 94.51 ? C20 IRX 701 A 1 
HETATM 6 C C21 IRX . . . B 2 98.423 105.998 111.785 1 94.51 ? C21 IRX 701 A 1 
HETATM 7 C C22 IRX . . . B 2 98.601 106.203 114.204 1 94.51 ? C22 IRX 701 A 1 
HETATM 8 C C24 IRX . . . B 2 97.302 105.638 114.356 1 94.51 ? C24 IRX 701 A 1 
HETATM 9 C C7 IRX . . . B 2 107.889 107.656 118.335 1 94.51 ? C7 IRX 701 A 1 
HETATM 10 C C8 IRX . . . B 2 109.306 108.478 118.219 1 94.51 ? C8 IRX 701 A 1 
HETATM 11 C C9 IRX . . . B 2 107.783 106.302 117.667 1 94.51 ? C9 IRX 701 A 1 
HETATM 12 C C11 IRX . . . B 2 110.126 106.251 116.885 1 94.51 ? C11 IRX 701 A 1 
HETATM 13 C C12 IRX . . . B 2 106.571 106.968 115.696 1 94.51 ? C12 IRX 701 A 1 
HETATM 14 C C14 IRX . . . B 2 106.727 107.781 114.37 1 94.51 ? C14 IRX 701 A 1 
HETATM 15 C C16 IRX . . . B 2 102.801 107.76 113.028 1 94.51 ? C16 IRX 701 A 1 
HETATM 16 C C18 IRX . . . B 2 100.65 107.029 112.745 1 94.51 ? C18 IRX 701 A 1 
HETATM 17 C C19 IRX . . . B 2 99.194 106.4 112.92 1 94.51 ? C19 IRX 701 A 1 
HETATM 18 C C23 IRX . . . B 2 97.125 105.434 111.926 1 94.51 ? C23 IRX 701 A 1 
HETATM 19 C C25 IRX . . . B 2 96.567 105.255 113.213 1 94.51 ? C25 IRX 701 A 1 
HETATM 20 N N4 IRX . . . B 2 107.912 106.663 116.274 1 94.51 ? N4 IRX 701 A 1 
HETATM 21 N N5 IRX . . . B 2 105.487 107.518 113.542 1 94.51 ? N5 IRX 701 A 1 
HETATM 22 N N6 IRX . . . B 2 101.662 107.101 113.624 1 94.51 ? N6 IRX 701 A 1 
HETATM 23 O O1 IRX . . . B 2 109.659 106.905 114.643 1 94.51 ? O1 IRX 701 A 1 
HETATM 24 O O2 IRX . . . B 2 101.092 107.632 111.552 1 94.51 ? O2 IRX 701 A 1 
HETATM 25 O O3 IRX . . . B 2 104.059 108.692 114.856 1 94.51 ? O3 IRX 701 A 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           25 
#