data_7YE8 # _model_server_result.job_id Ibxu6B8K4itQpfcsVRfMlw _model_server_result.datetime_utc '2024-11-21 11:24:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ye8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":101}' # _entry.id 7YE8 # _exptl.entry_id 7YE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 114.229 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-OCTANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7YE8 _cell.length_a 73.673 _cell.length_b 73.673 _cell.length_c 176.679 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E 1 1 C,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C8 H18' _chem_comp.formula_weight 114.229 _chem_comp.id OCT _chem_comp.mon_nstd_flag . _chem_comp.name N-OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCT sing 222 n n C1 H11 OCT sing 223 n n C1 H12 OCT sing 224 n n C1 H13 OCT sing 225 n n C2 C3 OCT sing 226 n n C2 H21 OCT sing 227 n n C2 H22 OCT sing 228 n n C3 C4 OCT sing 229 n n C3 H31 OCT sing 230 n n C3 H32 OCT sing 231 n n C4 C5 OCT sing 232 n n C4 H41 OCT sing 233 n n C4 H42 OCT sing 234 n n C5 C6 OCT sing 235 n n C5 H51 OCT sing 236 n n C5 H52 OCT sing 237 n n C6 C7 OCT sing 238 n n C6 H61 OCT sing 239 n n C6 H62 OCT sing 240 n n C7 C8 OCT sing 241 n n C7 H71 OCT sing 242 n n C7 H72 OCT sing 243 n n C8 H81 OCT sing 244 n n C8 H82 OCT sing 245 n n C8 H83 OCT sing 246 n n # _atom_sites.entry_id 7YE8 _atom_sites.fract_transf_matrix[1][1] 0.013573 _atom_sites.fract_transf_matrix[1][2] 0.007837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015673 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 OCT A 1 101 101 OCT OCT . F 2 OCT C 1 101 101 OCT OCT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCT . . . F 2 -25.416 26.285 1.276 1 31.01 ? C1 OCT 101 C 1 HETATM 2 C C2 OCT . . . F 2 -24.03 26.247 1.917 1 17.81 ? C2 OCT 101 C 1 HETATM 3 C C3 OCT . . . F 2 -22.908 26.386 0.89 1 17.97 ? C3 OCT 101 C 1 HETATM 4 C C4 OCT . . . F 2 -21.535 26.067 1.481 1 16.73 ? C4 OCT 101 C 1 HETATM 5 C C5 OCT . . . F 2 -20.402 26.365 0.501 1 18.58 ? C5 OCT 101 C 1 HETATM 6 C C6 OCT . . . F 2 -19.022 26.142 1.117 1 20.81 ? C6 OCT 101 C 1 HETATM 7 C C7 OCT . . . F 2 -17.901 26.733 0.265 1 28.19 ? C7 OCT 101 C 1 HETATM 8 C C8 OCT . . . F 2 -16.532 26.583 0.924 1 22.6 ? C8 OCT 101 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 410 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #