data_7YFP # _model_server_result.job_id i0ngdcrHwTwFQdCOzy20Kg _model_server_result.datetime_utc '2024-12-18 17:52:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yfp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 7YFP # _exptl.entry_id 7YFP _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YFP _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YFP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id N _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 16 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 23 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id G _struct_conn.ptnr2_label_atom_id O1B _struct_conn.ptnr2_label_comp_id ATP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id ATP _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.297 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7YFP _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id G _pdbx_nonpoly_scheme.entity_id 7 _pdbx_nonpoly_scheme.mon_id ATP _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 501 _pdbx_nonpoly_scheme.pdb_mon_id ATP _pdbx_nonpoly_scheme.auth_mon_id ATP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . G 7 172.536 175.849 250.022 1 169.53 ? PG ATP 501 B 1 HETATM 2 O O1G ATP . . . G 7 171.635 176.455 248.978 1 169.53 ? O1G ATP 501 B 1 HETATM 3 O O2G ATP . . . G 7 172.521 174.346 250.073 1 169.53 ? O2G ATP 501 B 1 HETATM 4 O O3G ATP . . . G 7 172.476 176.519 251.368 1 169.53 ? O3G ATP 501 B 1 HETATM 5 P PB ATP . . . G 7 174.552 177.689 249.547 1 169.53 ? PB ATP 501 B 1 HETATM 6 O O1B ATP . . . G 7 174.803 178.035 250.994 1 169.53 ? O1B ATP 501 B 1 HETATM 7 O O2B ATP . . . G 7 173.678 178.541 248.66 1 169.53 ? O2B ATP 501 B 1 HETATM 8 O O3B ATP . . . G 7 174.012 176.18 249.501 1 169.53 ? O3B ATP 501 B 1 HETATM 9 P PA ATP . . . G 7 175.963 177.435 247.234 1 169.53 ? PA ATP 501 B 1 HETATM 10 O O1A ATP . . . G 7 175.826 178.834 246.699 1 169.53 ? O1A ATP 501 B 1 HETATM 11 O O2A ATP . . . G 7 174.972 176.373 246.838 1 169.53 ? O2A ATP 501 B 1 HETATM 12 O O3A ATP . . . G 7 175.965 177.504 248.827 1 169.53 ? O3A ATP 501 B 1 HETATM 13 O O5' ATP . . . G 7 177.432 176.88 246.925 1 169.53 ? O5' ATP 501 B 1 HETATM 14 C C5' ATP . . . G 7 177.785 176.557 245.588 1 169.53 ? C5' ATP 501 B 1 HETATM 15 C C4' ATP . . . G 7 178.95 175.581 245.599 1 169.53 ? C4' ATP 501 B 1 HETATM 16 O O4' ATP . . . G 7 179.333 175.282 244.258 1 169.53 ? O4' ATP 501 B 1 HETATM 17 C C3' ATP . . . G 7 180.171 176.155 246.295 1 169.53 ? C3' ATP 501 B 1 HETATM 18 O O3' ATP . . . G 7 180.383 175.51 247.547 1 169.53 ? O3' ATP 501 B 1 HETATM 19 C C2' ATP . . . G 7 181.339 175.828 245.401 1 169.53 ? C2' ATP 501 B 1 HETATM 20 O O2' ATP . . . G 7 182.19 174.899 246.068 1 169.53 ? O2' ATP 501 B 1 HETATM 21 C C1' ATP . . . G 7 180.75 175.18 244.167 1 169.53 ? C1' ATP 501 B 1 HETATM 22 N N9 ATP . . . G 7 181.216 175.947 243.002 1 169.53 ? N9 ATP 501 B 1 HETATM 23 C C8 ATP . . . G 7 181.432 177.269 242.984 1 169.53 ? C8 ATP 501 B 1 HETATM 24 N N7 ATP . . . G 7 181.865 177.673 241.768 1 169.53 ? N7 ATP 501 B 1 HETATM 25 C C5 ATP . . . G 7 181.932 176.583 240.989 1 169.53 ? C5 ATP 501 B 1 HETATM 26 C C6 ATP . . . G 7 182.313 176.3 239.592 1 169.53 ? C6 ATP 501 B 1 HETATM 27 N N6 ATP . . . G 7 182.717 177.296 238.772 1 169.53 ? N6 ATP 501 B 1 HETATM 28 N N1 ATP . . . G 7 182.246 175.024 239.165 1 169.53 ? N1 ATP 501 B 1 HETATM 29 C C2 ATP . . . G 7 181.844 174.035 239.98 1 169.53 ? C2 ATP 501 B 1 HETATM 30 N N3 ATP . . . G 7 181.482 174.218 241.26 1 169.53 ? N3 ATP 501 B 1 HETATM 31 C C4 ATP . . . G 7 181.509 175.448 241.811 1 169.53 ? C4 ATP 501 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 127 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #