data_7YGQ
#
_model_server_result.job_id            3UlUpXCNR5QE9XC4Ejp7zA 
_model_server_result.datetime_utc      '2024-11-07 21:34:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ygq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    7YGQ 
#
_exptl.entry_id    7YGQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              575.679 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         91.201 
_cell.angle_beta          102.721 
_cell.angle_gamma         108.432 
_cell.entry_id            7YGQ 
_cell.length_a            55.056 
_cell.length_b            60.592 
_cell.length_c            68.303 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YGQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C30 H33 N5 O5 S' 
_chem_comp.formula_weight    575.679 
_chem_comp.id                HUR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N4 C18 HUR sing 152 n n 
N4 C17 HUR sing 153 n n 
O5 C18 HUR doub 154 n n 
C18 C15 HUR sing 155 n n 
C17 C16 HUR sing 156 n n 
C16 C15 HUR sing 157 n n 
C15 C14 HUR sing 158 n n 
O4 C19 HUR doub 159 n n 
C14 C13 HUR sing 160 n n 
C19 C13 HUR sing 161 n n 
C19 C20 HUR sing 162 n n 
C13 N3 HUR sing 163 n n 
C20 N5 HUR doub 164 n y 
C20 S1 HUR sing 165 n y 
N5 C21 HUR sing 166 n y 
N3 C12 HUR sing 167 n n 
O3 C12 HUR doub 168 n n 
C12 C11 HUR sing 169 n n 
C21 C23 HUR doub 170 n y 
C21 C22 HUR sing 171 n y 
S1 C22 HUR sing 172 n y 
O2 C10 HUR doub 173 n n 
C23 C24 HUR sing 174 n y 
C22 C26 HUR doub 175 n y 
N1 C7 HUR sing 176 n y 
N1 C4 HUR sing 177 n y 
C10 C7 HUR sing 178 n n 
C10 N2 HUR sing 179 n n 
C11 N2 HUR sing 180 n n 
C11 C27 HUR sing 181 n n 
C24 C25 HUR doub 182 n y 
C7 C8 HUR doub 183 n y 
C3 C4 HUR doub 184 n y 
C3 C2 HUR sing 185 n y 
C26 C25 HUR sing 186 n y 
C4 C5 HUR sing 187 n y 
C27 C28 HUR sing 188 n n 
C2 C1 HUR doub 189 n y 
C8 C5 HUR sing 190 n y 
C5 C6 HUR doub 191 n y 
C30 C28 HUR sing 192 n n 
C28 C29 HUR sing 193 n n 
C1 C6 HUR sing 194 n y 
C6 O1 HUR sing 195 n n 
O1 C9 HUR sing 196 n n 
C1 H1 HUR sing 197 n n 
C11 H2 HUR sing 198 n n 
C13 H3 HUR sing 199 n n 
C14 H4 HUR sing 200 n n 
C14 H5 HUR sing 201 n n 
C15 H6 HUR sing 202 n n 
C16 H7 HUR sing 203 n n 
C16 H8 HUR sing 204 n n 
C17 H9 HUR sing 205 n n 
C17 H10 HUR sing 206 n n 
C2 H11 HUR sing 207 n n 
C23 H12 HUR sing 208 n n 
C24 H13 HUR sing 209 n n 
C25 H14 HUR sing 210 n n 
C26 H15 HUR sing 211 n n 
C27 H16 HUR sing 212 n n 
C27 H17 HUR sing 213 n n 
C28 H18 HUR sing 214 n n 
C29 H19 HUR sing 215 n n 
C29 H20 HUR sing 216 n n 
C29 H21 HUR sing 217 n n 
C3 H22 HUR sing 218 n n 
C30 H23 HUR sing 219 n n 
C30 H24 HUR sing 220 n n 
C30 H25 HUR sing 221 n n 
C8 H26 HUR sing 222 n n 
C9 H27 HUR sing 223 n n 
C9 H28 HUR sing 224 n n 
C9 H29 HUR sing 225 n n 
N1 H30 HUR sing 226 n n 
N2 H31 HUR sing 227 n n 
N3 H32 HUR sing 228 n n 
N4 H33 HUR sing 229 n n 
#
_atom_sites.entry_id                     7YGQ 
_atom_sites.fract_transf_matrix[1][1]    0.018163 
_atom_sites.fract_transf_matrix[1][2]    0.006053 
_atom_sites.fract_transf_matrix[1][3]    0.004715 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017396 
_atom_sites.fract_transf_matrix[2][3]    0.001711 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015081 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HUR A 1 401 1 HUR HUR . 
D 2 HUR B 1 401 2 HUR HUR . 
E 3 HOH A 1 501 23 HOH HOH . 
E 3 HOH A 2 502 32 HOH HOH . 
E 3 HOH A 3 503 44 HOH HOH . 
E 3 HOH A 4 504 25 HOH HOH . 
E 3 HOH A 5 505 8 HOH HOH . 
E 3 HOH A 6 506 14 HOH HOH . 
E 3 HOH A 7 507 42 HOH HOH . 
E 3 HOH A 8 508 1 HOH HOH . 
E 3 HOH A 9 509 20 HOH HOH . 
E 3 HOH A 10 510 9 HOH HOH . 
E 3 HOH A 11 511 3 HOH HOH . 
E 3 HOH A 12 512 5 HOH HOH . 
E 3 HOH A 13 513 16 HOH HOH . 
E 3 HOH A 14 514 35 HOH HOH . 
E 3 HOH A 15 515 15 HOH HOH . 
E 3 HOH A 16 516 18 HOH HOH . 
E 3 HOH A 17 517 38 HOH HOH . 
E 3 HOH A 18 518 11 HOH HOH . 
E 3 HOH A 19 519 46 HOH HOH . 
E 3 HOH A 20 520 37 HOH HOH . 
E 3 HOH A 21 521 7 HOH HOH . 
E 3 HOH A 22 522 33 HOH HOH . 
E 3 HOH A 23 523 6 HOH HOH . 
E 3 HOH A 24 524 10 HOH HOH . 
E 3 HOH A 25 525 40 HOH HOH . 
E 3 HOH A 26 526 4 HOH HOH . 
E 3 HOH A 27 527 17 HOH HOH . 
E 3 HOH A 28 528 36 HOH HOH . 
E 3 HOH A 29 529 49 HOH HOH . 
E 3 HOH A 30 530 31 HOH HOH . 
F 3 HOH B 1 501 12 HOH HOH . 
F 3 HOH B 2 502 26 HOH HOH . 
F 3 HOH B 3 503 39 HOH HOH . 
F 3 HOH B 4 504 13 HOH HOH . 
F 3 HOH B 5 505 43 HOH HOH . 
F 3 HOH B 6 506 19 HOH HOH . 
F 3 HOH B 7 507 2 HOH HOH . 
F 3 HOH B 8 508 21 HOH HOH . 
F 3 HOH B 9 509 27 HOH HOH . 
F 3 HOH B 10 510 34 HOH HOH . 
F 3 HOH B 11 511 28 HOH HOH . 
F 3 HOH B 12 512 24 HOH HOH . 
F 3 HOH B 13 513 22 HOH HOH . 
F 3 HOH B 14 514 41 HOH HOH . 
F 3 HOH B 15 515 30 HOH HOH . 
F 3 HOH B 16 516 47 HOH HOH . 
F 3 HOH B 17 517 29 HOH HOH . 
F 3 HOH B 18 518 50 HOH HOH . 
F 3 HOH B 19 519 45 HOH HOH . 
F 3 HOH B 20 520 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HUR . . . D 2 31.223 -65.405 24.102 1 51.86 ? C1 HUR 401 B 1 
HETATM 2 C C10 HUR . . . D 2 33.808 -60.226 26.057 1 50.42 ? C10 HUR 401 B 1 
HETATM 3 C C11 HUR . . . D 2 34.249 -58.601 27.923 1 45.5 ? C11 HUR 401 B 1 
HETATM 4 C C12 HUR . . . D 2 35.769 -58.661 27.984 1 47.22 ? C12 HUR 401 B 1 
HETATM 5 C C13 HUR . . . D 2 37.901 -57.34 27.612 1 43.37 ? C13 HUR 401 B 1 
HETATM 6 C C14 HUR . . . D 2 38.46 -56.993 26.242 1 41.62 ? C14 HUR 401 B 1 
HETATM 7 C C15 HUR . . . D 2 38.228 -58.181 25.266 1 42.33 ? C15 HUR 401 B 1 
HETATM 8 C C16 HUR . . . D 2 38.932 -59.216 25.654 1 41.18 ? C16 HUR 401 B 1 
HETATM 9 C C17 HUR . . . D 2 39.801 -59.666 24.411 1 39.33 ? C17 HUR 401 B 1 
HETATM 10 C C18 HUR . . . D 2 38.675 -57.786 23.692 1 38.16 ? C18 HUR 401 B 1 
HETATM 11 C C19 HUR . . . D 2 38.132 -56.543 28.814 1 44.41 ? C19 HUR 401 B 1 
HETATM 12 C C2 HUR . . . D 2 30.721 -65.385 25.4 1 54.89 ? C2 HUR 401 B 1 
HETATM 13 C C20 HUR . . . D 2 37.645 -56.674 30.048 1 48.1 ? C20 HUR 401 B 1 
HETATM 14 C C21 HUR . . . D 2 37.639 -57.896 32.004 1 50.28 ? C21 HUR 401 B 1 
HETATM 15 C C22 HUR . . . D 2 36.63 -57.021 32.363 1 49.26 ? C22 HUR 401 B 1 
HETATM 16 C C23 HUR . . . D 2 38.048 -58.895 32.91 1 50.51 ? C23 HUR 401 B 1 
HETATM 17 C C24 HUR . . . D 2 37.445 -59 34.152 1 54.19 ? C24 HUR 401 B 1 
HETATM 18 C C25 HUR . . . D 2 36.427 -58.116 34.511 1 49.08 ? C25 HUR 401 B 1 
HETATM 19 C C26 HUR . . . D 2 36.02 -57.126 33.612 1 58.5 ? C26 HUR 401 B 1 
HETATM 20 C C27 HUR . . . D 2 33.748 -58.328 29.339 1 45.6 ? C27 HUR 401 B 1 
HETATM 21 C C28 HUR . . . D 2 32.244 -58.087 29.396 1 45.92 ? C28 HUR 401 B 1 
HETATM 22 C C29 HUR . . . D 2 31.758 -57.993 30.837 1 47.37 ? C29 HUR 401 B 1 
HETATM 23 C C3 HUR . . . D 2 31.052 -64.349 26.249 1 53.84 ? C3 HUR 401 B 1 
HETATM 24 C C30 HUR . . . D 2 31.855 -56.845 28.611 1 43.78 ? C30 HUR 401 B 1 
HETATM 25 C C4 HUR . . . D 2 31.905 -63.312 25.794 1 56.9 ? C4 HUR 401 B 1 
HETATM 26 C C5 HUR . . . D 2 32.402 -63.326 24.524 1 57.29 ? C5 HUR 401 B 1 
HETATM 27 C C6 HUR . . . D 2 32.057 -64.386 23.662 1 58.43 ? C6 HUR 401 B 1 
HETATM 28 C C7 HUR . . . D 2 33.134 -61.52 25.639 1 51.45 ? C7 HUR 401 B 1 
HETATM 29 C C8 HUR . . . D 2 33.206 -62.157 24.412 1 46.69 ? C8 HUR 401 B 1 
HETATM 30 C C9 HUR . . . D 2 33.858 -64.91 22.268 1 59.96 ? C9 HUR 401 B 1 
HETATM 31 N N1 HUR . . . D 2 32.36 -62.216 26.436 1 55.93 ? N1 HUR 401 B 1 
HETATM 32 N N2 HUR . . . D 2 33.662 -59.822 27.434 1 42.84 ? N2 HUR 401 B 1 
HETATM 33 N N3 HUR . . . D 2 36.47 -57.472 27.567 1 43.93 ? N3 HUR 401 B 1 
HETATM 34 N N4 HUR . . . D 2 39.783 -58.437 23.433 1 40.12 ? N4 HUR 401 B 1 
HETATM 35 N N5 HUR . . . D 2 38.164 -57.683 30.732 1 35.08 ? N5 HUR 401 B 1 
HETATM 36 O O1 HUR . . . D 2 32.556 -64.412 22.363 1 62.94 ? O1 HUR 401 B 1 
HETATM 37 O O2 HUR . . . D 2 34.427 -59.58 25.291 1 48.93 ? O2 HUR 401 B 1 
HETATM 38 O O3 HUR . . . D 2 36.346 -59.618 28.357 1 43.34 ? O3 HUR 401 B 1 
HETATM 39 O O4 HUR . . . D 2 39.68 -56.541 28.729 1 46.64 ? O4 HUR 401 B 1 
HETATM 40 O O5 HUR . . . D 2 38.876 -56.424 23.556 1 43.63 ? O5 HUR 401 B 1 
HETATM 41 S S1 HUR . . . D 2 36.45 -55.992 31.013 1 63.65 ? S1 HUR 401 B 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           41 
#