data_7YH1
#
_model_server_result.job_id            1lFGawSjw8fA93U2ZHq7PQ 
_model_server_result.datetime_utc      '2024-10-19 12:42:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7yh1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    7YH1 
#
_exptl.entry_id    7YH1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         76.65 
_cell.angle_beta          75.32 
_cell.angle_gamma         80.61 
_cell.entry_id            7YH1 
_cell.length_a            48.338 
_cell.length_b            53.574 
_cell.length_c            59.856 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YH1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,Q,R 1 1 
C,D,M,N,O,P,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 21 D HIS 19 1_555 E ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc2 A NE2 HIS 52 D HIS 50 1_555 I ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc3 A O PHE 117 D PHE 115 1_555 G ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.829 ? 
metalc ? metalc4 E ZN ZN . D ZN 201 1_545 C O PHE 117 B PHE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc5 F ZN ZN . D ZN 202 1_555 B NE2 HIS 52 A HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc6 F ZN ZN . D ZN 202 1_555 C OE1 GLU 44 B GLU 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc7 G ZN ZN . D ZN 203 1_455 C NE2 HIS 21 B HIS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc8 G ZN ZN . D ZN 203 1_555 S O HOH . B HOH 311 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc9 H ZN ZN . D ZN 204 1_555 Q O HOH . D HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? 
metalc ? metalc10 H ZN ZN . D ZN 204 1_555 Q O HOH . D HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc11 H ZN ZN . D ZN 204 1_555 Q O HOH . D HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? 
metalc ? metalc12 B NE2 HIS 21 A HIS 19 1_555 J ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc13 B ND1 HIS 21 A HIS 19 1_555 L ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
metalc ? metalc14 B NE2 HIS 52 A HIS 50 1_555 I ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc15 B O PHE 117 A PHE 115 1_555 K ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? 
metalc ? metalc16 B OXT PHE 117 A PHE 115 1_555 K ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc17 I ZN ZN . A ZN 201 1_555 C OE2 GLU 44 B GLU 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? 
metalc ? metalc18 J ZN ZN . A ZN 202 1_456 D O PHE 117 C PHE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? 
metalc ? metalc19 J ZN ZN . A ZN 202 1_456 D OXT PHE 117 C PHE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc20 J ZN ZN . A ZN 202 1_555 T O HOH . C HOH 311 1_654 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? 
metalc ? metalc21 K ZN ZN . A ZN 203 1_546 D NE2 HIS 21 C HIS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc22 K ZN ZN . A ZN 203 1_555 T O HOH . C HOH 305 1_564 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc23 L ZN ZN . A ZN 204 1_555 R O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc24 C NE2 HIS 52 B HIS 50 1_555 N ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc25 C NE2 HIS 52 B HIS 50 1_555 O ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc26 M ZN ZN . B ZN 201 1_555 S O HOH . B HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc27 N ZN ZN . B ZN 202 1_555 D NE2 HIS 52 C HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
metalc ? metalc28 D ND1 HIS 21 C HIS 19 1_555 P ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc29 D NE2 HIS 52 C HIS 50 1_555 O ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc30 P ZN ZN . C ZN 202 1_555 T O HOH . C HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? 
metalc ? metalc31 P ZN ZN . C ZN 202 1_555 T O HOH . C HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7YH1 
_atom_sites.fract_transf_matrix[1][1]    0.020688 
_atom_sites.fract_transf_matrix[1][2]    -0.003421 
_atom_sites.fract_transf_matrix[1][3]    -0.004836 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018919 
_atom_sites.fract_transf_matrix[2][3]    -0.003832 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017621 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN D 1 201 3 ZN ZN . 
F 2 ZN D 1 202 4 ZN ZN . 
G 2 ZN D 1 203 5 ZN ZN . 
H 2 ZN D 1 204 11 ZN ZN . 
I 2 ZN A 1 201 1 ZN ZN . 
J 2 ZN A 1 202 6 ZN ZN . 
K 2 ZN A 1 203 7 ZN ZN . 
L 2 ZN A 1 204 8 ZN ZN . 
M 2 ZN B 1 201 10 ZN ZN . 
N 2 ZN B 1 202 12 ZN ZN . 
O 2 ZN C 1 201 2 ZN ZN . 
P 2 ZN C 1 202 9 ZN ZN . 
Q 3 HOH D 1 301 18 HOH HOH . 
Q 3 HOH D 2 302 20 HOH HOH . 
Q 3 HOH D 3 303 1 HOH HOH . 
Q 3 HOH D 4 304 39 HOH HOH . 
Q 3 HOH D 5 305 22 HOH HOH . 
Q 3 HOH D 6 306 48 HOH HOH . 
Q 3 HOH D 7 307 11 HOH HOH . 
Q 3 HOH D 8 308 25 HOH HOH . 
Q 3 HOH D 9 309 2 HOH HOH . 
Q 3 HOH D 10 310 3 HOH HOH . 
Q 3 HOH D 11 311 28 HOH HOH . 
Q 3 HOH D 12 312 16 HOH HOH . 
Q 3 HOH D 13 313 35 HOH HOH . 
Q 3 HOH D 14 314 47 HOH HOH . 
Q 3 HOH D 15 315 51 HOH HOH . 
Q 3 HOH D 16 316 52 HOH HOH . 
R 3 HOH A 1 301 43 HOH HOH . 
R 3 HOH A 2 302 15 HOH HOH . 
R 3 HOH A 3 303 50 HOH HOH . 
R 3 HOH A 4 304 14 HOH HOH . 
R 3 HOH A 5 305 6 HOH HOH . 
R 3 HOH A 6 306 9 HOH HOH . 
R 3 HOH A 7 307 33 HOH HOH . 
R 3 HOH A 8 308 38 HOH HOH . 
R 3 HOH A 9 309 34 HOH HOH . 
R 3 HOH A 10 310 17 HOH HOH . 
R 3 HOH A 11 311 55 HOH HOH . 
R 3 HOH A 12 312 62 HOH HOH . 
R 3 HOH A 13 313 32 HOH HOH . 
R 3 HOH A 14 314 56 HOH HOH . 
R 3 HOH A 15 315 36 HOH HOH . 
R 3 HOH A 16 316 30 HOH HOH . 
S 3 HOH B 1 301 8 HOH HOH . 
S 3 HOH B 2 302 29 HOH HOH . 
S 3 HOH B 3 303 27 HOH HOH . 
S 3 HOH B 4 304 49 HOH HOH . 
S 3 HOH B 5 305 23 HOH HOH . 
S 3 HOH B 6 306 53 HOH HOH . 
S 3 HOH B 7 307 4 HOH HOH . 
S 3 HOH B 8 308 10 HOH HOH . 
S 3 HOH B 9 309 61 HOH HOH . 
S 3 HOH B 10 310 57 HOH HOH . 
S 3 HOH B 11 311 21 HOH HOH . 
S 3 HOH B 12 312 59 HOH HOH . 
T 3 HOH C 1 301 7 HOH HOH . 
T 3 HOH C 2 302 46 HOH HOH . 
T 3 HOH C 3 303 54 HOH HOH . 
T 3 HOH C 4 304 41 HOH HOH . 
T 3 HOH C 5 305 24 HOH HOH . 
T 3 HOH C 6 306 31 HOH HOH . 
T 3 HOH C 7 307 42 HOH HOH . 
T 3 HOH C 8 308 12 HOH HOH . 
T 3 HOH C 9 309 40 HOH HOH . 
T 3 HOH C 10 310 37 HOH HOH . 
T 3 HOH C 11 311 19 HOH HOH . 
T 3 HOH C 12 312 5 HOH HOH . 
T 3 HOH C 13 313 44 HOH HOH . 
T 3 HOH C 14 314 13 HOH HOH . 
T 3 HOH C 15 315 45 HOH HOH . 
T 3 HOH C 16 316 26 HOH HOH . 
T 3 HOH C 17 317 60 HOH HOH . 
T 3 HOH C 18 318 58 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -28.756 
_atom_site.Cartn_y               -15.784 
_atom_site.Cartn_z               -4.567 
_atom_site.occupancy             0.83 
_atom_site.B_iso_or_equiv        42.61 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#