data_7YHG # _model_server_result.job_id rZsbZ-G-Qhbvy2gcnLWApA _model_server_result.datetime_utc '2025-07-31 21:21:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 7YHG # _exptl.entry_id 7YHG _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-mannopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 A CYS 8 1_555 A SG CYS 25 A CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 19 A CYS 19 1_555 A SG CYS 35 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id MAN _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-mannopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-mannose;D-mannose;mannose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MAN sing 133 n n C1 O1 MAN sing 134 n n C1 O5 MAN sing 135 n n C1 H1 MAN sing 136 n n C2 C3 MAN sing 137 n n C2 O2 MAN sing 138 n n C2 H2 MAN sing 139 n n C3 C4 MAN sing 140 n n C3 O3 MAN sing 141 n n C3 H3 MAN sing 142 n n C4 C5 MAN sing 143 n n C4 O4 MAN sing 144 n n C4 H4 MAN sing 145 n n C5 C6 MAN sing 146 n n C5 O5 MAN sing 147 n n C5 H5 MAN sing 148 n n C6 O6 MAN sing 149 n n C6 H61 MAN sing 150 n n C6 H62 MAN sing 151 n n O1 HO1 MAN sing 152 n n O2 HO2 MAN sing 153 n n O3 HO3 MAN sing 154 n n O4 HO4 MAN sing 155 n n O6 HO6 MAN sing 156 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version MAN DManpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 MAN a-D-mannopyranose 'COMMON NAME' GMML 1 MAN a-D-Manp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 MAN Man 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7YHG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id MAN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 101 _pdbx_nonpoly_scheme.pdb_mon_id MAN _pdbx_nonpoly_scheme.auth_mon_id MAN _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MAN . . . B 2 1.908 -3.117 -9.295 1 0 ? C1 MAN 101 A 1 HETATM 2 C C2 MAN . . . B 2 2.85 -1.912 -9.14 1 0 ? C2 MAN 101 A 1 HETATM 3 C C3 MAN . . . B 2 2.146 -0.804 -8.342 1 0 ? C3 MAN 101 A 1 HETATM 4 C C4 MAN . . . B 2 0.85 -0.41 -9.031 1 0 ? C4 MAN 101 A 1 HETATM 5 C C5 MAN . . . B 2 -0.028 -1.644 -9.188 1 0 ? C5 MAN 101 A 1 HETATM 6 C C6 MAN . . . B 2 -1.314 -1.369 -9.933 1 0 ? C6 MAN 101 A 1 HETATM 7 O O2 MAN . . . B 2 3.234 -1.407 -10.407 1 0 ? O2 MAN 101 A 1 HETATM 8 O O3 MAN . . . B 2 2.978 0.332 -8.279 1 0 ? O3 MAN 101 A 1 HETATM 9 O O4 MAN . . . B 2 0.189 0.571 -8.248 1 0 ? O4 MAN 101 A 1 HETATM 10 O O5 MAN . . . B 2 0.692 -2.672 -9.932 1 0 ? O5 MAN 101 A 1 HETATM 11 O O6 MAN . . . B 2 -2.048 -2.575 -10.135 1 0 ? O6 MAN 101 A 1 HETATM 12 H H1 MAN . . . B 2 2.364 -3.801 -10.024 1 0 ? H1 MAN 101 A 1 HETATM 13 H H2 MAN . . . B 2 3.742 -2.217 -8.573 1 0 ? H2 MAN 101 A 1 HETATM 14 H H3 MAN . . . B 2 1.905 -1.17 -7.332 1 0 ? H3 MAN 101 A 1 HETATM 15 H H4 MAN . . . B 2 1.07 0.003 -10.026 1 0 ? H4 MAN 101 A 1 HETATM 16 H H5 MAN . . . B 2 -0.258 -2.042 -8.189 1 0 ? H5 MAN 101 A 1 HETATM 17 H H61 MAN . . . B 2 -1.057 -0.896 -10.89 1 0 ? H61 MAN 101 A 1 HETATM 18 H H62 MAN . . . B 2 -1.91 -0.648 -9.353 1 0 ? H62 MAN 101 A 1 HETATM 19 H HO2 MAN . . . B 2 2.447 -1.181 -10.915 1 0 ? HO2 MAN 101 A 1 HETATM 20 H HO3 MAN . . . B 2 3.19 0.572 -9.19 1 0 ? HO3 MAN 101 A 1 HETATM 21 H HO4 MAN . . . B 2 0.77 1.337 -8.17 1 0 ? HO4 MAN 101 A 1 HETATM 22 H HO6 MAN . . . B 2 -2.762 -2.616 -9.482 1 0 ? HO6 MAN 101 A 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 5886 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #