data_7YJJ # _model_server_result.job_id mf4wmdFAPVgsfkwlHfcrMQ _model_server_result.datetime_utc '2025-02-05 05:52:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yjj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 7YJJ # _exptl.entry_id 7YJJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 518.554 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Gossypol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YJJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YJJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H30 O8' _chem_comp.formula_weight 518.554 _chem_comp.id GO3 _chem_comp.mon_nstd_flag . _chem_comp.name Gossypol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C34 C19 GO3 sing 129 n n C19 C33 GO3 sing 130 n n C19 C15 GO3 sing 131 n n O3 C27 GO3 sing 132 n n C15 C27 GO3 doub 133 n y C15 C11 GO3 sing 134 n y C23 C11 GO3 doub 135 n y C23 C17 GO3 sing 136 n y C31 C17 GO3 sing 137 n n O8 C38 GO3 doub 138 n n C27 C29 GO3 sing 139 n y C11 C13 GO3 sing 140 n y C17 C9 GO3 doub 141 n y O2 C22 GO3 sing 142 n n C38 C26 GO3 sing 143 n n C29 O5 GO3 sing 144 n n C29 C25 GO3 doub 145 n y C13 C25 GO3 sing 146 n y C13 C21 GO3 doub 147 n y C9 C21 GO3 sing 148 n y C9 C10 GO3 sing 149 n n C25 C37 GO3 sing 150 n n C22 C10 GO3 doub 151 n y C22 C14 GO3 sing 152 n y C21 O1 GO3 sing 153 n n C10 C18 GO3 sing 154 n y C26 C14 GO3 sing 155 n y C26 C30 GO3 doub 156 n y C14 C12 GO3 doub 157 n y O6 C30 GO3 sing 158 n n C37 O7 GO3 doub 159 n n C30 C28 GO3 sing 160 n y C18 C32 GO3 sing 161 n n C18 C24 GO3 doub 162 n y C12 C24 GO3 sing 163 n y C12 C16 GO3 sing 164 n y C28 C16 GO3 doub 165 n y C28 O4 GO3 sing 166 n n C16 C20 GO3 sing 167 n n C20 C35 GO3 sing 168 n n C20 C36 GO3 sing 169 n n C19 H191 GO3 sing 170 n n C20 H201 GO3 sing 171 n n C23 H231 GO3 sing 172 n n C24 H241 GO3 sing 173 n n C31 H311 GO3 sing 174 n n C31 H312 GO3 sing 175 n n C31 H313 GO3 sing 176 n n C32 H323 GO3 sing 177 n n C32 H322 GO3 sing 178 n n C32 H321 GO3 sing 179 n n C33 H331 GO3 sing 180 n n C33 H332 GO3 sing 181 n n C33 H333 GO3 sing 182 n n C34 H341 GO3 sing 183 n n C34 H342 GO3 sing 184 n n C34 H343 GO3 sing 185 n n C35 H353 GO3 sing 186 n n C35 H352 GO3 sing 187 n n C35 H351 GO3 sing 188 n n C36 H362 GO3 sing 189 n n C36 H361 GO3 sing 190 n n C36 H363 GO3 sing 191 n n C37 H371 GO3 sing 192 n n C38 H381 GO3 sing 193 n n O1 H011 GO3 sing 194 n n O2 H021 GO3 sing 195 n n O3 H031 GO3 sing 196 n n O4 H041 GO3 sing 197 n n O5 H051 GO3 sing 198 n n O6 H061 GO3 sing 199 n n # _atom_sites.entry_id 7YJJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id GO3 _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1001 _pdbx_nonpoly_scheme.auth_seq_num 1001 _pdbx_nonpoly_scheme.pdb_mon_id GO3 _pdbx_nonpoly_scheme.auth_mon_id GOS _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 GO3 . . . E 2 255.263 240.575 267.712 1 2.72 ? C9 GO3 1001 C 1 HETATM 2 C C10 GO3 . . . E 2 254.331 241.652 268.442 1 2.72 ? C10 GO3 1001 C 1 HETATM 3 C C11 GO3 . . . E 2 256.976 238.657 266.43 1 2.72 ? C11 GO3 1001 C 1 HETATM 4 C C12 GO3 . . . E 2 252.722 243.616 269.873 1 2.72 ? C12 GO3 1001 C 1 HETATM 5 C C13 GO3 . . . E 2 256.175 238.262 267.512 1 2.72 ? C13 GO3 1001 C 1 HETATM 6 C C14 GO3 . . . E 2 252.217 242.986 268.734 1 2.72 ? C14 GO3 1001 C 1 HETATM 7 C C15 GO3 . . . E 2 257.849 237.748 265.75 1 2.72 ? C15 GO3 1001 C 1 HETATM 8 C C16 GO3 . . . E 2 251.972 244.61 270.63 1 2.72 ? C16 GO3 1001 C 1 HETATM 9 C C17 GO3 . . . E 2 256.068 240.924 266.662 1 2.72 ? C17 GO3 1001 C 1 HETATM 10 C C18 GO3 . . . E 2 254.811 242.277 269.561 1 2.72 ? C18 GO3 1001 C 1 HETATM 11 C C19 GO3 . . . E 2 258.76 238.119 264.519 1 2.72 ? C19 GO3 1001 C 1 HETATM 12 C C20 GO3 . . . E 2 252.551 245.304 271.939 1 2.72 ? C20 GO3 1001 C 1 HETATM 13 C C21 GO3 . . . E 2 255.333 239.246 268.142 1 2.72 ? C21 GO3 1001 C 1 HETATM 14 C C22 GO3 . . . E 2 253.042 242.006 268.033 1 2.72 ? C22 GO3 1001 C 1 HETATM 15 C C23 GO3 . . . E 2 256.89 239.992 266.034 1 2.72 ? C23 GO3 1001 C 1 HETATM 16 C C24 GO3 . . . E 2 254.02 243.217 270.24 1 2.72 ? C24 GO3 1001 C 1 HETATM 17 C C25 GO3 . . . E 2 256.253 236.909 267.927 1 2.72 ? C25 GO3 1001 C 1 HETATM 18 C C26 GO3 . . . E 2 250.918 243.373 268.345 1 2.72 ? C26 GO3 1001 C 1 HETATM 19 C C27 GO3 . . . E 2 257.875 236.435 266.191 1 2.72 ? C27 GO3 1001 C 1 HETATM 20 C C28 GO3 . . . E 2 250.696 244.926 270.177 1 2.72 ? C28 GO3 1001 C 1 HETATM 21 C C29 GO3 . . . E 2 257.094 236.019 267.259 1 2.72 ? C29 GO3 1001 C 1 HETATM 22 C C30 GO3 . . . E 2 250.174 244.325 269.06 1 2.72 ? C30 GO3 1001 C 1 HETATM 23 C C31 GO3 . . . E 2 256.06 242.342 266.174 1 2.72 ? C31 GO3 1001 C 1 HETATM 24 C C32 GO3 . . . E 2 256.203 241.966 270.075 1 2.72 ? C32 GO3 1001 C 1 HETATM 25 C C33 GO3 . . . E 2 260.27 237.837 264.684 1 2.72 ? C33 GO3 1001 C 1 HETATM 26 C C34 GO3 . . . E 2 258.203 237.411 263.282 1 2.72 ? C34 GO3 1001 C 1 HETATM 27 C C35 GO3 . . . E 2 252.242 246.769 272.382 1 2.72 ? C35 GO3 1001 C 1 HETATM 28 C C36 GO3 . . . E 2 252.516 244.352 273.172 1 2.72 ? C36 GO3 1001 C 1 HETATM 29 C C37 GO3 . . . E 2 255.485 236.255 269.074 1 2.72 ? C37 GO3 1001 C 1 HETATM 30 C C38 GO3 . . . E 2 250.217 242.775 267.14 1 2.72 ? C38 GO3 1001 C 1 HETATM 31 O O1 GO3 . . . E 2 254.501 238.953 269.223 1 2.72 ? O1 GO3 1001 C 1 HETATM 32 O O2 GO3 . . . E 2 252.657 241.326 266.881 1 2.72 ? O2 GO3 1001 C 1 HETATM 33 O O3 GO3 . . . E 2 258.705 235.49 265.551 1 2.72 ? O3 GO3 1001 C 1 HETATM 34 O O4 GO3 . . . E 2 249.876 245.852 270.821 1 2.72 ? O4 GO3 1001 C 1 HETATM 35 O O5 GO3 . . . E 2 257.149 234.688 267.692 1 2.72 ? O5 GO3 1001 C 1 HETATM 36 O O6 GO3 . . . E 2 248.874 244.67 268.646 1 2.72 ? O6 GO3 1001 C 1 HETATM 37 O O7 GO3 . . . E 2 255.86 236.343 270.199 1 2.72 ? O7 GO3 1001 C 1 HETATM 38 O O8 GO3 . . . E 2 250.217 243.303 266.081 1 2.72 ? O8 GO3 1001 C 1 HETATM 39 H H191 GO3 . . . E 2 258.717 239.047 264.3 1 2.72 ? H191 GO3 1001 C 1 HETATM 40 H H201 GO3 . . . E 2 253.449 245.447 271.719 1 2.72 ? H201 GO3 1001 C 1 HETATM 41 H H231 GO3 . . . E 2 257.406 240.277 265.324 1 2.72 ? H231 GO3 1001 C 1 HETATM 42 H H241 GO3 . . . E 2 254.4 243.589 270.979 1 2.72 ? H241 GO3 1001 C 1 HETATM 43 H H311 GO3 . . . E 2 256.664 242.417 265.424 1 2.72 ? H311 GO3 1001 C 1 HETATM 44 H H312 GO3 . . . E 2 256.366 242.921 266.885 1 2.72 ? H312 GO3 1001 C 1 HETATM 45 H H313 GO3 . . . E 2 255.162 242.574 265.935 1 2.72 ? H313 GO3 1001 C 1 HETATM 46 H H323 GO3 . . . E 2 256.848 242.153 269.379 1 2.72 ? H323 GO3 1001 C 1 HETATM 47 H H322 GO3 . . . E 2 256.265 241.036 270.324 1 2.72 ? H322 GO3 1001 C 1 HETATM 48 H H321 GO3 . . . E 2 256.397 242.532 270.838 1 2.72 ? H321 GO3 1001 C 1 HETATM 49 H H331 GO3 . . . E 2 260.437 237.306 265.47 1 2.72 ? H331 GO3 1001 C 1 HETATM 50 H H332 GO3 . . . E 2 260.745 238.671 264.778 1 2.72 ? H332 GO3 1001 C 1 HETATM 51 H H333 GO3 . . . E 2 260.637 237.386 263.908 1 2.72 ? H333 GO3 1001 C 1 HETATM 52 H H341 GO3 . . . E 2 258.752 236.656 263.02 1 2.72 ? H341 GO3 1001 C 1 HETATM 53 H H342 GO3 . . . E 2 258.156 238.047 262.557 1 2.72 ? H342 GO3 1001 C 1 HETATM 54 H H343 GO3 . . . E 2 257.311 237.11 263.484 1 2.72 ? H343 GO3 1001 C 1 HETATM 55 H H353 GO3 . . . E 2 251.383 246.859 272.817 1 2.72 ? H353 GO3 1001 C 1 HETATM 56 H H352 GO3 . . . E 2 252.288 247.363 271.622 1 2.72 ? H352 GO3 1001 C 1 HETATM 57 H H351 GO3 . . . E 2 252.929 247.058 273.014 1 2.72 ? H351 GO3 1001 C 1 HETATM 58 H H362 GO3 . . . E 2 251.63 244.32 273.568 1 2.72 ? H362 GO3 1001 C 1 HETATM 59 H H361 GO3 . . . E 2 253.146 244.671 273.84 1 2.72 ? H361 GO3 1001 C 1 HETATM 60 H H363 GO3 . . . E 2 252.77 243.448 272.923 1 2.72 ? H363 GO3 1001 C 1 HETATM 61 H H371 GO3 . . . E 2 254.729 235.752 268.883 1 2.72 ? H371 GO3 1001 C 1 HETATM 62 H H381 GO3 . . . E 2 249.768 241.972 267.25 1 2.72 ? H381 GO3 1001 C 1 HETATM 63 H H011 GO3 . . . E 2 253.697 239.158 269.021 1 2.72 ? H011 GO3 1001 C 1 HETATM 64 H H021 GO3 . . . E 2 253.232 241.502 266.278 1 2.72 ? H021 GO3 1001 C 1 HETATM 65 H H031 GO3 . . . E 2 259.366 235.297 266.047 1 2.72 ? H031 GO3 1001 C 1 HETATM 66 H H041 GO3 . . . E 2 249.144 245.901 270.396 1 2.72 ? H041 GO3 1001 C 1 HETATM 67 H H051 GO3 . . . E 2 256.387 234.32 267.617 1 2.72 ? H051 GO3 1001 C 1 HETATM 68 H H061 GO3 . . . E 2 248.731 245.506 268.644 1 2.72 ? H061 GO3 1001 C 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 68 #