data_7YKD
#
_model_server_result.job_id            pP1xETm4NDOJXe4b6GVpRQ 
_model_server_result.datetime_utc      '2024-10-11 00:29:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ykd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":402}' 
#
_entry.id    7YKD 
#
_exptl.entry_id    7YKD 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              386.654 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            CHOLESTEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 G N N 
? 7 H N N 
? 7 I N N 
? 7 J N N 
? 7 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 112 A CYS 112 1_555 B SG CYS 189 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 F SG CYS 22 S CYS 22 1_555 F SG CYS 96 S CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 F SG CYS 159 S CYS 159 1_555 F SG CYS 229 S CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C27 H46 O' 
_chem_comp.formula_weight    386.654 
_chem_comp.id                CLR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              CHOLESTEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7YKD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 7 CLR A 1 401 401 CLR CLR . 
H 7 CLR A 1 402 402 CLR CLR . 
I 7 CLR A 1 403 403 CLR CLR . 
J 7 CLR A 1 404 404 CLR CLR . 
K 7 CLR A 1 405 405 CLR CLR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CLR . . . H 7 155.869 124.541 123.467 1 20 ? C1 CLR 402 A 1 
HETATM 2 C C2 CLR . . . H 7 157.032 123.907 124.216 1 20 ? C2 CLR 402 A 1 
HETATM 3 C C3 CLR . . . H 7 158.305 123.974 123.399 1 20 ? C3 CLR 402 A 1 
HETATM 4 C C4 CLR . . . H 7 158.646 125.431 123.176 1 20 ? C4 CLR 402 A 1 
HETATM 5 C C5 CLR . . . H 7 157.529 126.066 122.377 1 20 ? C5 CLR 402 A 1 
HETATM 6 C C6 CLR . . . H 7 157.849 126.744 121.257 1 20 ? C6 CLR 402 A 1 
HETATM 7 C C7 CLR . . . H 7 156.843 127.435 120.374 1 20 ? C7 CLR 402 A 1 
HETATM 8 C C8 CLR . . . H 7 155.452 127.494 120.983 1 20 ? C8 CLR 402 A 1 
HETATM 9 C C9 CLR . . . H 7 155.146 126.166 121.676 1 20 ? C9 CLR 402 A 1 
HETATM 10 C C10 CLR . . . H 7 156.104 125.939 122.87 1 20 ? C10 CLR 402 A 1 
HETATM 11 C C11 CLR . . . H 7 153.644 125.949 121.984 1 20 ? C11 CLR 402 A 1 
HETATM 12 C C12 CLR . . . H 7 152.633 126.477 120.969 1 20 ? C12 CLR 402 A 1 
HETATM 13 C C13 CLR . . . H 7 152.951 127.856 120.417 1 20 ? C13 CLR 402 A 1 
HETATM 14 C C14 CLR . . . H 7 154.392 127.773 119.924 1 20 ? C14 CLR 402 A 1 
HETATM 15 C C15 CLR . . . H 7 154.607 129.026 119.093 1 20 ? C15 CLR 402 A 1 
HETATM 16 C C16 CLR . . . H 7 153.247 129.258 118.464 1 20 ? C16 CLR 402 A 1 
HETATM 17 C C17 CLR . . . H 7 152.258 128.257 119.094 1 20 ? C17 CLR 402 A 1 
HETATM 18 C C18 CLR . . . H 7 152.713 128.913 121.527 1 20 ? C18 CLR 402 A 1 
HETATM 19 C C19 CLR . . . H 7 156.012 127.007 123.975 1 20 ? C19 CLR 402 A 1 
HETATM 20 C C20 CLR . . . H 7 150.802 128.782 119.079 1 20 ? C20 CLR 402 A 1 
HETATM 21 C C21 CLR . . . H 7 149.778 127.892 119.785 1 20 ? C21 CLR 402 A 1 
HETATM 22 C C22 CLR . . . H 7 150.294 128.985 117.642 1 20 ? C22 CLR 402 A 1 
HETATM 23 C C23 CLR . . . H 7 149.64 130.349 117.462 1 20 ? C23 CLR 402 A 1 
HETATM 24 C C24 CLR . . . H 7 149.023 130.502 116.072 1 20 ? C24 CLR 402 A 1 
HETATM 25 C C25 CLR . . . H 7 147.495 130.428 116.04 1 20 ? C25 CLR 402 A 1 
HETATM 26 C C26 CLR . . . H 7 146.98 130.744 114.639 1 20 ? C26 CLR 402 A 1 
HETATM 27 C C27 CLR . . . H 7 146.953 129.072 116.486 1 20 ? C27 CLR 402 A 1 
HETATM 28 O O1 CLR . . . H 7 159.368 123.322 124.097 1 20 ? O1 CLR 402 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           28 
#