data_7YMG
#
_model_server_result.job_id            4QrLifkNklFbRpdyb3Ti8Q 
_model_server_result.datetime_utc      '2025-01-10 08:56:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ymg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":203}' 
#
_entry.id    7YMG 
#
_exptl.entry_id    7YMG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.025 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FORMIC ACID' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          89.97 
_cell.angle_gamma         90 
_cell.entry_id            7YMG 
_cell.length_a            47.573 
_cell.length_b            32.454 
_cell.length_c            79.634 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YMG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,K 1 1 
B,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OH TYR 24 A TYR 65 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? 
metalc ? metalc2 A O LYS 119 A LYS 160 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc3 A O GLU 122 A GLU 163 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc4 C NA NA . A NA 201 1_555 K O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc5 B OH TYR 24 B TYR 65 1_555 H NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
metalc ? metalc6 B O LYS 119 B LYS 160 1_555 H NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc7 B O GLU 122 B GLU 163 1_555 H NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc8 H NA NA . B NA 201 1_555 L O HOH . B HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? 
#
_chem_comp.formula           'C H2 O2' 
_chem_comp.formula_weight    46.025 
_chem_comp.id                FMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FORMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O1 FMT doub 83 n n 
C O2 FMT sing 84 n n 
C H FMT sing 85 n n 
O2 HO2 FMT sing 86 n n 
#
_atom_sites.entry_id                     7YMG 
_atom_sites.fract_transf_matrix[1][1]    0.02102 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    -0.000011 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.030813 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012557 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 201 1 NA NA . 
D 3 JHO A 1 202 201 JHO CH8 . 
E 4 FMT A 1 203 206 FMT FMT . 
F 4 FMT A 1 204 207 FMT FMT . 
G 5 GOL A 1 205 208 GOL GOL . 
H 2 NA B 1 201 2 NA NA . 
I 3 JHO B 1 202 202 JHO CH8 . 
J 4 FMT B 1 203 205 FMT FMT . 
K 6 HOH A 1 301 12 HOH HOH . 
K 6 HOH A 2 302 249 HOH HOH . 
K 6 HOH A 3 303 119 HOH HOH . 
K 6 HOH A 4 304 104 HOH HOH . 
K 6 HOH A 5 305 172 HOH HOH . 
K 6 HOH A 6 306 13 HOH HOH . 
K 6 HOH A 7 307 89 HOH HOH . 
K 6 HOH A 8 308 86 HOH HOH . 
K 6 HOH A 9 309 55 HOH HOH . 
K 6 HOH A 10 310 73 HOH HOH . 
K 6 HOH A 11 311 115 HOH HOH . 
K 6 HOH A 12 312 125 HOH HOH . 
K 6 HOH A 13 313 132 HOH HOH . 
K 6 HOH A 14 314 92 HOH HOH . 
K 6 HOH A 15 315 107 HOH HOH . 
K 6 HOH A 16 316 14 HOH HOH . 
K 6 HOH A 17 317 141 HOH HOH . 
K 6 HOH A 18 318 74 HOH HOH . 
K 6 HOH A 19 319 51 HOH HOH . 
K 6 HOH A 20 320 143 HOH HOH . 
K 6 HOH A 21 321 124 HOH HOH . 
K 6 HOH A 22 322 27 HOH HOH . 
K 6 HOH A 23 323 84 HOH HOH . 
K 6 HOH A 24 324 121 HOH HOH . 
K 6 HOH A 25 325 22 HOH HOH . 
K 6 HOH A 26 326 2 HOH HOH . 
K 6 HOH A 27 327 46 HOH HOH . 
K 6 HOH A 28 328 21 HOH HOH . 
K 6 HOH A 29 329 81 HOH HOH . 
K 6 HOH A 30 330 60 HOH HOH . 
K 6 HOH A 31 331 113 HOH HOH . 
K 6 HOH A 32 332 142 HOH HOH . 
K 6 HOH A 33 333 10 HOH HOH . 
K 6 HOH A 34 334 109 HOH HOH . 
K 6 HOH A 35 335 16 HOH HOH . 
K 6 HOH A 36 336 122 HOH HOH . 
K 6 HOH A 37 337 6 HOH HOH . 
K 6 HOH A 38 338 75 HOH HOH . 
K 6 HOH A 39 339 150 HOH HOH . 
K 6 HOH A 40 340 35 HOH HOH . 
K 6 HOH A 41 341 200 HOH HOH . 
K 6 HOH A 42 342 36 HOH HOH . 
K 6 HOH A 43 343 88 HOH HOH . 
K 6 HOH A 44 344 23 HOH HOH . 
K 6 HOH A 45 345 43 HOH HOH . 
K 6 HOH A 46 346 140 HOH HOH . 
K 6 HOH A 47 347 139 HOH HOH . 
K 6 HOH A 48 348 162 HOH HOH . 
K 6 HOH A 49 349 5 HOH HOH . 
K 6 HOH A 50 350 53 HOH HOH . 
K 6 HOH A 51 351 71 HOH HOH . 
K 6 HOH A 52 352 79 HOH HOH . 
K 6 HOH A 53 353 85 HOH HOH . 
K 6 HOH A 54 354 70 HOH HOH . 
K 6 HOH A 55 355 105 HOH HOH . 
K 6 HOH A 56 356 29 HOH HOH . 
K 6 HOH A 57 357 66 HOH HOH . 
K 6 HOH A 58 358 33 HOH HOH . 
K 6 HOH A 59 359 131 HOH HOH . 
K 6 HOH A 60 360 93 HOH HOH . 
K 6 HOH A 61 361 99 HOH HOH . 
K 6 HOH A 62 362 103 HOH HOH . 
K 6 HOH A 63 363 58 HOH HOH . 
K 6 HOH A 64 364 24 HOH HOH . 
K 6 HOH A 65 365 149 HOH HOH . 
K 6 HOH A 66 366 247 HOH HOH . 
K 6 HOH A 67 367 42 HOH HOH . 
K 6 HOH A 68 368 158 HOH HOH . 
K 6 HOH A 69 369 127 HOH HOH . 
K 6 HOH A 70 370 177 HOH HOH . 
L 6 HOH B 1 301 11 HOH HOH . 
L 6 HOH B 2 302 248 HOH HOH . 
L 6 HOH B 3 303 114 HOH HOH . 
L 6 HOH B 4 304 8 HOH HOH . 
L 6 HOH B 5 305 101 HOH HOH . 
L 6 HOH B 6 306 61 HOH HOH . 
L 6 HOH B 7 307 147 HOH HOH . 
L 6 HOH B 8 308 97 HOH HOH . 
L 6 HOH B 9 309 106 HOH HOH . 
L 6 HOH B 10 310 112 HOH HOH . 
L 6 HOH B 11 311 67 HOH HOH . 
L 6 HOH B 12 312 136 HOH HOH . 
L 6 HOH B 13 313 37 HOH HOH . 
L 6 HOH B 14 314 135 HOH HOH . 
L 6 HOH B 15 315 19 HOH HOH . 
L 6 HOH B 16 316 47 HOH HOH . 
L 6 HOH B 17 317 118 HOH HOH . 
L 6 HOH B 18 318 18 HOH HOH . 
L 6 HOH B 19 319 82 HOH HOH . 
L 6 HOH B 20 320 3 HOH HOH . 
L 6 HOH B 21 321 159 HOH HOH . 
L 6 HOH B 22 322 31 HOH HOH . 
L 6 HOH B 23 323 9 HOH HOH . 
L 6 HOH B 24 324 4 HOH HOH . 
L 6 HOH B 25 325 187 HOH HOH . 
L 6 HOH B 26 326 174 HOH HOH . 
L 6 HOH B 27 327 44 HOH HOH . 
L 6 HOH B 28 328 72 HOH HOH . 
L 6 HOH B 29 329 15 HOH HOH . 
L 6 HOH B 30 330 1 HOH HOH . 
L 6 HOH B 31 331 32 HOH HOH . 
L 6 HOH B 32 332 77 HOH HOH . 
L 6 HOH B 33 333 123 HOH HOH . 
L 6 HOH B 34 334 100 HOH HOH . 
L 6 HOH B 35 335 34 HOH HOH . 
L 6 HOH B 36 336 96 HOH HOH . 
L 6 HOH B 37 337 45 HOH HOH . 
L 6 HOH B 38 338 128 HOH HOH . 
L 6 HOH B 39 339 25 HOH HOH . 
L 6 HOH B 40 340 52 HOH HOH . 
L 6 HOH B 41 341 201 HOH HOH . 
L 6 HOH B 42 342 80 HOH HOH . 
L 6 HOH B 43 343 40 HOH HOH . 
L 6 HOH B 44 344 64 HOH HOH . 
L 6 HOH B 45 345 166 HOH HOH . 
L 6 HOH B 46 346 133 HOH HOH . 
L 6 HOH B 47 347 69 HOH HOH . 
L 6 HOH B 48 348 91 HOH HOH . 
L 6 HOH B 49 349 7 HOH HOH . 
L 6 HOH B 50 350 28 HOH HOH . 
L 6 HOH B 51 351 65 HOH HOH . 
L 6 HOH B 52 352 83 HOH HOH . 
L 6 HOH B 53 353 62 HOH HOH . 
L 6 HOH B 54 354 144 HOH HOH . 
L 6 HOH B 55 355 30 HOH HOH . 
L 6 HOH B 56 356 26 HOH HOH . 
L 6 HOH B 57 357 116 HOH HOH . 
L 6 HOH B 58 358 94 HOH HOH . 
L 6 HOH B 59 359 137 HOH HOH . 
L 6 HOH B 60 360 110 HOH HOH . 
L 6 HOH B 61 361 49 HOH HOH . 
L 6 HOH B 62 362 138 HOH HOH . 
L 6 HOH B 63 363 181 HOH HOH . 
L 6 HOH B 64 364 243 HOH HOH . 
L 6 HOH B 65 365 120 HOH HOH . 
L 6 HOH B 66 366 129 HOH HOH . 
L 6 HOH B 67 367 203 HOH HOH . 
L 6 HOH B 68 368 126 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C FMT . . . E 4 5.118 3.68 -23.508 1 35.39 ? C FMT 203 A 1 
HETATM 2 O O1 FMT . . . E 4 6.204 3.288 -23.94 1 35.86 ? O1 FMT 203 A 1 
HETATM 3 O O2 FMT . . . E 4 4.808 3.708 -22.313 1 34.84 ? O2 FMT 203 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           3 
#