data_7YMH # _model_server_result.job_id eeXjffBNn-3-TDx_rXPamg _model_server_result.datetime_utc '2025-07-04 04:41:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ymh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 7YMH # _exptl.entry_id 7YMH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 170.186 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Noradrenaline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YMH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YMH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 123 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 99 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 200 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 176 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.028 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H12 N O3 1' _chem_comp.formula_weight 170.186 _chem_comp.id E5E _chem_comp.mon_nstd_flag . _chem_comp.name Noradrenaline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAD CAL E5E sing 83 n n CAL CAK E5E sing 84 n n CAL CAH E5E sing 85 n n CAK CAF E5E doub 86 n y CAK CAG E5E sing 87 n y CAF CAE E5E sing 88 n y CAG CAJ E5E doub 89 n y CAE CAI E5E doub 90 n y CAJ CAI E5E sing 91 n y CAJ OAC E5E sing 92 n n CAI OAB E5E sing 93 n n CAH NAA E5E sing 94 n n OAC HOAC E5E sing 95 n n CAG HAG E5E sing 96 n n OAB HOAB E5E sing 97 n n CAE HAE E5E sing 98 n n CAF HAF E5E sing 99 n n CAL HAL E5E sing 100 n n OAD HOAD E5E sing 101 n n CAH HAH E5E sing 102 n n CAH HAHA E5E sing 103 n n NAA HNAA E5E sing 104 n n NAA HNAB E5E sing 105 n n NAA HNAC E5E sing 106 n n # _atom_sites.entry_id 7YMH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id E5E _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 503 _pdbx_nonpoly_scheme.pdb_mon_id E5E _pdbx_nonpoly_scheme.auth_mon_id E5E _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC E5E . . . D 4 116.686 121.421 145.427 1 42.17 ? OAC E5E 401 A 1 HETATM 2 C CAJ E5E . . . D 4 117.336 121.777 144.24 1 42.17 ? CAJ E5E 401 A 1 HETATM 3 C CAG E5E . . . D 4 118.71 121.953 144.217 1 42.17 ? CAG E5E 401 A 1 HETATM 4 C CAI E5E . . . D 4 116.594 121.952 143.089 1 42.17 ? CAI E5E 401 A 1 HETATM 5 O OAB E5E . . . D 4 115.206 121.774 143.134 1 42.17 ? OAB E5E 401 A 1 HETATM 6 C CAE E5E . . . D 4 117.22 122.306 141.905 1 42.17 ? CAE E5E 401 A 1 HETATM 7 C CAF E5E . . . D 4 118.594 122.481 141.881 1 42.17 ? CAF E5E 401 A 1 HETATM 8 C CAK E5E . . . D 4 119.339 122.301 143.032 1 42.17 ? CAK E5E 401 A 1 HETATM 9 C CAL E5E . . . D 4 120.854 122.497 143.002 1 42.17 ? CAL E5E 401 A 1 HETATM 10 O OAD E5E . . . D 4 121.369 122.299 144.286 1 42.17 ? OAD E5E 401 A 1 HETATM 11 C CAH E5E . . . D 4 121.51 121.503 142.049 1 42.17 ? CAH E5E 401 A 1 HETATM 12 N NAA E5E . . . D 4 122.879 121.259 142.464 1 42.17 ? NAA E5E 401 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 12 #