data_7YRQ # _model_server_result.job_id C1zBp72UlO--LKyuCmvegg _model_server_result.datetime_utc '2024-11-21 17:18:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yrq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 7YRQ # _exptl.entry_id 7YRQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 761.084 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YRQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YRQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C42 H83 N O8 P' _chem_comp.formula_weight 761.084 _chem_comp.id K9G _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O17 C16 K9G doub 171 n n C14 C13 K9G sing 172 n n C14 C15 K9G sing 173 n n C16 C15 K9G sing 174 n n C16 O18 K9G sing 175 n n C12 C13 K9G sing 176 n n C12 C11 K9G sing 177 n n C19 O18 K9G sing 178 n n C19 C20 K9G sing 179 n n C10 C11 K9G sing 180 n n C10 C09 K9G sing 181 n n C07 C08 K9G sing 182 n n C08 C09 K9G sing 183 n n C20 C21 K9G sing 184 n n C20 O33 K9G sing 185 n n O35 C34 K9G doub 186 n n C21 O22 K9G sing 187 n n O33 C34 K9G sing 188 n n C34 C36 K9G sing 189 n n C32 N29 K9G sing 190 n n C27 C28 K9G sing 191 n n C27 O26 K9G sing 192 n n O22 P23 K9G sing 193 n n C28 N29 K9G sing 194 n n C31 N29 K9G sing 195 n n C36 C37 K9G sing 196 n n N29 C30 K9G sing 197 n n C37 C38 K9G sing 198 n n O26 P23 K9G sing 199 n n C38 C39 K9G sing 200 n n P23 O25 K9G doub 201 n n P23 O24 K9G sing 202 n n C39 C40 K9G sing 203 n n C40 C41 K9G sing 204 n n C07 H1 K9G sing 205 n n C07 H2 K9G sing 206 n n C08 H4 K9G sing 207 n n C08 H5 K9G sing 208 n n C09 H6 K9G sing 209 n n C09 H7 K9G sing 210 n n C10 H8 K9G sing 211 n n C10 H9 K9G sing 212 n n C11 H10 K9G sing 213 n n C11 H11 K9G sing 214 n n C12 H12 K9G sing 215 n n C12 H13 K9G sing 216 n n C13 H14 K9G sing 217 n n C13 H15 K9G sing 218 n n C14 H16 K9G sing 219 n n C14 H17 K9G sing 220 n n C15 H18 K9G sing 221 n n C15 H19 K9G sing 222 n n C19 H20 K9G sing 223 n n C19 H21 K9G sing 224 n n C20 H22 K9G sing 225 n n C21 H23 K9G sing 226 n n C21 H24 K9G sing 227 n n C27 H25 K9G sing 228 n n C27 H26 K9G sing 229 n n C28 H27 K9G sing 230 n n C28 H28 K9G sing 231 n n C30 H29 K9G sing 232 n n C30 H30 K9G sing 233 n n C30 H31 K9G sing 234 n n C31 H32 K9G sing 235 n n C31 H33 K9G sing 236 n n C31 H34 K9G sing 237 n n C32 H35 K9G sing 238 n n C32 H36 K9G sing 239 n n C32 H37 K9G sing 240 n n C36 H38 K9G sing 241 n n C36 H39 K9G sing 242 n n C37 H40 K9G sing 243 n n C37 H41 K9G sing 244 n n C38 H42 K9G sing 245 n n C38 H43 K9G sing 246 n n C39 H44 K9G sing 247 n n C39 H45 K9G sing 248 n n C40 H46 K9G sing 249 n n C40 H47 K9G sing 250 n n C41 H48 K9G sing 251 n n C41 H49 K9G sing 252 n n O24 H51 K9G sing 253 n n C01 C02 K9G sing 254 n n C02 C03 K9G sing 255 n n C03 C04 K9G sing 256 n n C04 C05 K9G sing 257 n n C05 C06 K9G sing 258 n n C06 C07 K9G sing 259 n n C41 C42 K9G sing 260 n n C42 C43 K9G sing 261 n n C43 C44 K9G doub 262 n n C44 C45 K9G sing 263 n n C45 C46 K9G sing 264 n n C46 C47 K9G sing 265 n n C47 C48 K9G sing 266 n n C48 C49 K9G sing 267 n n C49 C50 K9G sing 268 n n C50 C51 K9G sing 269 n n C51 C52 K9G sing 270 n n C01 H3 K9G sing 271 n n C01 H50 K9G sing 272 n n C01 H52 K9G sing 273 n n C02 H53 K9G sing 274 n n C02 H54 K9G sing 275 n n C03 H55 K9G sing 276 n n C03 H56 K9G sing 277 n n C04 H57 K9G sing 278 n n C04 H58 K9G sing 279 n n C05 H59 K9G sing 280 n n C05 H60 K9G sing 281 n n C06 H61 K9G sing 282 n n C06 H62 K9G sing 283 n n C42 H63 K9G sing 284 n n C42 H64 K9G sing 285 n n C43 H65 K9G sing 286 n n C44 H67 K9G sing 287 n n C45 H69 K9G sing 288 n n C45 H70 K9G sing 289 n n C46 H71 K9G sing 290 n n C46 H72 K9G sing 291 n n C47 H73 K9G sing 292 n n C47 H74 K9G sing 293 n n C48 H75 K9G sing 294 n n C48 H76 K9G sing 295 n n C49 H77 K9G sing 296 n n C49 H78 K9G sing 297 n n C50 H79 K9G sing 298 n n C50 H80 K9G sing 299 n n C51 H81 K9G sing 300 n n C51 H82 K9G sing 301 n n C52 H83 K9G sing 302 n n C52 H84 K9G sing 303 n n C52 H85 K9G sing 304 n n # _atom_sites.entry_id 7YRQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K9G A 1 801 801 K9G LP . D 2 K9G B 1 801 801 K9G LP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C08 K9G . . . C 2 140.553 167.081 159.678 1 56.69 ? C08 K9G 801 A 1 HETATM 2 C C09 K9G . . . C 2 140.64 165.548 159.812 1 56.69 ? C09 K9G 801 A 1 HETATM 3 C C10 K9G . . . C 2 141.822 164.949 158.961 1 56.69 ? C10 K9G 801 A 1 HETATM 4 C C11 K9G . . . C 2 141.728 163.399 158.807 1 56.69 ? C11 K9G 801 A 1 HETATM 5 C C12 K9G . . . C 2 143.115 162.712 158.684 1 56.69 ? C12 K9G 801 A 1 HETATM 6 C C13 K9G . . . C 2 143.397 162.183 157.245 1 56.69 ? C13 K9G 801 A 1 HETATM 7 C C14 K9G . . . C 2 144.835 161.62 157.07 1 56.69 ? C14 K9G 801 A 1 HETATM 8 C C15 K9G . . . C 2 144.996 160.257 157.804 1 56.69 ? C15 K9G 801 A 1 HETATM 9 C C16 K9G . . . C 2 146.493 159.937 158.112 1 56.69 ? C16 K9G 801 A 1 HETATM 10 C C19 K9G . . . C 2 146.997 157.644 158.637 1 56.69 ? C19 K9G 801 A 1 HETATM 11 C C20 K9G . . . C 2 148.282 156.803 158.587 1 56.69 ? C20 K9G 801 A 1 HETATM 12 C C21 K9G . . . C 2 148.343 155.863 157.378 1 56.69 ? C21 K9G 801 A 1 HETATM 13 C C27 K9G . . . C 2 150.114 155.741 152.482 1 56.69 ? C27 K9G 801 A 1 HETATM 14 O O17 K9G . . . C 2 147.174 160.701 158.715 1 56.69 ? O17 K9G 801 A 1 HETATM 15 O O18 K9G . . . C 2 147.043 158.682 157.653 1 56.69 ? O18 K9G 801 A 1 HETATM 16 O O22 K9G . . . C 2 148.974 156.555 156.298 1 56.69 ? O22 K9G 801 A 1 HETATM 17 O O24 K9G . . . C 2 151.305 156.082 155.224 1 56.69 ? O24 K9G 801 A 1 HETATM 18 O O25 K9G . . . C 2 149.804 154.161 155.485 1 56.69 ? O25 K9G 801 A 1 HETATM 19 O O26 K9G . . . C 2 149.261 155.929 153.636 1 56.69 ? O26 K9G 801 A 1 HETATM 20 O O33 K9G . . . C 2 148.339 155.995 159.735 1 56.69 ? O33 K9G 801 A 1 HETATM 21 P P23 K9G . . . C 2 149.867 155.645 155.18 1 56.69 ? P23 K9G 801 A 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 904 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #