data_7YSX # _model_server_result.job_id BZEPSSST514o8aWxpua97Q _model_server_result.datetime_utc '2024-10-15 11:23:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ysx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 7YSX # _exptl.entry_id 7YSX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YSX _cell.length_a 57.479 _cell.length_b 80.642 _cell.length_c 163.274 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YSX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 100 A HIS 164 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc2 A NE2 HIS 136 A HIS 200 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc3 A OD2 ASP 137 A ASP 201 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc4 A OD1 ASP 137 A ASP 201 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc5 A OD1 ASP 254 A ASP 318 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc6 C ZN ZN . A ZN 601 1_555 N O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc7 C ZN ZN . A ZN 601 1_555 N O HOH . A HOH 764 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc8 D MG MG . A MG 602 1_555 N O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc9 D MG MG . A MG 602 1_555 N O HOH . A HOH 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc10 D MG MG . A MG 602 1_555 N O HOH . A HOH 767 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc11 D MG MG . A MG 602 1_555 N O HOH . A HOH 778 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc12 D MG MG . A MG 602 1_555 N O HOH . A HOH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc13 B NE2 HIS 100 B HIS 164 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc14 B NE2 HIS 136 B HIS 200 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc15 B OD2 ASP 137 B ASP 201 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc16 B OD1 ASP 137 B ASP 201 1_555 I MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc17 B OD1 ASP 254 B ASP 318 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc18 H ZN ZN . B ZN 601 1_555 O O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc19 H ZN ZN . B ZN 601 1_555 O O HOH . B HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc20 I MG MG . B MG 602 1_555 O O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc21 I MG MG . B MG 602 1_555 O O HOH . B HOH 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc22 I MG MG . B MG 602 1_555 O O HOH . B HOH 735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc23 I MG MG . B MG 602 1_555 O O HOH . B HOH 737 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc24 I MG MG . B MG 602 1_555 O O HOH . B HOH 766 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7YSX _atom_sites.fract_transf_matrix[1][1] 0.017398 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006125 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 601 ZN ZN . D 3 MG A 1 602 602 MG MG . E 4 JU3 A 1 603 801 JU3 DRG . F 5 EDO A 1 604 2 EDO EDO . G 5 EDO A 1 605 5 EDO EDO . H 2 ZN B 1 601 601 ZN ZN . I 3 MG B 1 602 602 MG MG . J 4 JU3 B 1 603 801 JU3 DRG . K 5 EDO B 1 604 1 EDO EDO . L 5 EDO B 1 605 3 EDO EDO . M 5 EDO B 1 606 4 EDO EDO . N 6 HOH A 1 701 148 HOH HOH . N 6 HOH A 2 702 209 HOH HOH . N 6 HOH A 3 703 156 HOH HOH . N 6 HOH A 4 704 132 HOH HOH . N 6 HOH A 5 705 191 HOH HOH . N 6 HOH A 6 706 174 HOH HOH . N 6 HOH A 7 707 89 HOH HOH . N 6 HOH A 8 708 207 HOH HOH . N 6 HOH A 9 709 107 HOH HOH . N 6 HOH A 10 710 38 HOH HOH . N 6 HOH A 11 711 4 HOH HOH . N 6 HOH A 12 712 106 HOH HOH . N 6 HOH A 13 713 115 HOH HOH . N 6 HOH A 14 714 226 HOH HOH . N 6 HOH A 15 715 12 HOH HOH . N 6 HOH A 16 716 182 HOH HOH . N 6 HOH A 17 717 145 HOH HOH . N 6 HOH A 18 718 103 HOH HOH . N 6 HOH A 19 719 2 HOH HOH . N 6 HOH A 20 720 102 HOH HOH . N 6 HOH A 21 721 141 HOH HOH . N 6 HOH A 22 722 36 HOH HOH . N 6 HOH A 23 723 79 HOH HOH . N 6 HOH A 24 724 60 HOH HOH . N 6 HOH A 25 725 213 HOH HOH . N 6 HOH A 26 726 55 HOH HOH . N 6 HOH A 27 727 20 HOH HOH . N 6 HOH A 28 728 18 HOH HOH . N 6 HOH A 29 729 176 HOH HOH . N 6 HOH A 30 730 86 HOH HOH . N 6 HOH A 31 731 72 HOH HOH . N 6 HOH A 32 732 128 HOH HOH . N 6 HOH A 33 733 6 HOH HOH . N 6 HOH A 34 734 37 HOH HOH . N 6 HOH A 35 735 112 HOH HOH . N 6 HOH A 36 736 29 HOH HOH . N 6 HOH A 37 737 56 HOH HOH . N 6 HOH A 38 738 205 HOH HOH . N 6 HOH A 39 739 180 HOH HOH . N 6 HOH A 40 740 140 HOH HOH . N 6 HOH A 41 741 163 HOH HOH . N 6 HOH A 42 742 155 HOH HOH . N 6 HOH A 43 743 64 HOH HOH . N 6 HOH A 44 744 117 HOH HOH . N 6 HOH A 45 745 23 HOH HOH . N 6 HOH A 46 746 70 HOH HOH . N 6 HOH A 47 747 45 HOH HOH . N 6 HOH A 48 748 32 HOH HOH . N 6 HOH A 49 749 46 HOH HOH . N 6 HOH A 50 750 110 HOH HOH . N 6 HOH A 51 751 200 HOH HOH . N 6 HOH A 52 752 58 HOH HOH . N 6 HOH A 53 753 161 HOH HOH . N 6 HOH A 54 754 184 HOH HOH . N 6 HOH A 55 755 5 HOH HOH . N 6 HOH A 56 756 49 HOH HOH . N 6 HOH A 57 757 121 HOH HOH . N 6 HOH A 58 758 196 HOH HOH . N 6 HOH A 59 759 75 HOH HOH . N 6 HOH A 60 760 62 HOH HOH . N 6 HOH A 61 761 130 HOH HOH . N 6 HOH A 62 762 22 HOH HOH . N 6 HOH A 63 763 51 HOH HOH . N 6 HOH A 64 764 14 HOH HOH . N 6 HOH A 65 765 179 HOH HOH . N 6 HOH A 66 766 63 HOH HOH . N 6 HOH A 67 767 11 HOH HOH . N 6 HOH A 68 768 153 HOH HOH . N 6 HOH A 69 769 109 HOH HOH . N 6 HOH A 70 770 53 HOH HOH . N 6 HOH A 71 771 199 HOH HOH . N 6 HOH A 72 772 131 HOH HOH . N 6 HOH A 73 773 44 HOH HOH . N 6 HOH A 74 774 162 HOH HOH . N 6 HOH A 75 775 124 HOH HOH . N 6 HOH A 76 776 67 HOH HOH . N 6 HOH A 77 777 105 HOH HOH . N 6 HOH A 78 778 3 HOH HOH . N 6 HOH A 79 779 185 HOH HOH . N 6 HOH A 80 780 9 HOH HOH . N 6 HOH A 81 781 164 HOH HOH . N 6 HOH A 82 782 68 HOH HOH . N 6 HOH A 83 783 134 HOH HOH . N 6 HOH A 84 784 225 HOH HOH . N 6 HOH A 85 785 170 HOH HOH . N 6 HOH A 86 786 154 HOH HOH . N 6 HOH A 87 787 104 HOH HOH . N 6 HOH A 88 788 39 HOH HOH . N 6 HOH A 89 789 98 HOH HOH . N 6 HOH A 90 790 99 HOH HOH . N 6 HOH A 91 791 111 HOH HOH . N 6 HOH A 92 792 152 HOH HOH . N 6 HOH A 93 793 71 HOH HOH . N 6 HOH A 94 794 116 HOH HOH . N 6 HOH A 95 795 149 HOH HOH . N 6 HOH A 96 796 129 HOH HOH . N 6 HOH A 97 797 54 HOH HOH . N 6 HOH A 98 798 187 HOH HOH . N 6 HOH A 99 799 183 HOH HOH . N 6 HOH A 100 800 133 HOH HOH . N 6 HOH A 101 801 194 HOH HOH . N 6 HOH A 102 802 167 HOH HOH . N 6 HOH A 103 803 113 HOH HOH . N 6 HOH A 104 804 31 HOH HOH . N 6 HOH A 105 805 97 HOH HOH . N 6 HOH A 106 806 211 HOH HOH . N 6 HOH A 107 807 181 HOH HOH . N 6 HOH A 108 808 143 HOH HOH . N 6 HOH A 109 809 95 HOH HOH . N 6 HOH A 110 810 212 HOH HOH . N 6 HOH A 111 811 30 HOH HOH . N 6 HOH A 112 812 66 HOH HOH . N 6 HOH A 113 813 7 HOH HOH . N 6 HOH A 114 814 80 HOH HOH . N 6 HOH A 115 815 100 HOH HOH . N 6 HOH A 116 816 24 HOH HOH . N 6 HOH A 117 817 221 HOH HOH . N 6 HOH A 118 818 188 HOH HOH . N 6 HOH A 119 819 78 HOH HOH . N 6 HOH A 120 820 65 HOH HOH . N 6 HOH A 121 821 90 HOH HOH . N 6 HOH A 122 822 94 HOH HOH . N 6 HOH A 123 823 42 HOH HOH . N 6 HOH A 124 824 88 HOH HOH . N 6 HOH A 125 825 151 HOH HOH . N 6 HOH A 126 826 57 HOH HOH . N 6 HOH A 127 827 96 HOH HOH . N 6 HOH A 128 828 35 HOH HOH . N 6 HOH A 129 829 171 HOH HOH . N 6 HOH A 130 830 1 HOH HOH . N 6 HOH A 131 831 172 HOH HOH . N 6 HOH A 132 832 169 HOH HOH . N 6 HOH A 133 833 136 HOH HOH . N 6 HOH A 134 834 177 HOH HOH . N 6 HOH A 135 835 216 HOH HOH . N 6 HOH A 136 836 215 HOH HOH . N 6 HOH A 137 837 208 HOH HOH . N 6 HOH A 138 838 85 HOH HOH . N 6 HOH A 139 839 82 HOH HOH . N 6 HOH A 140 840 222 HOH HOH . N 6 HOH A 141 841 142 HOH HOH . N 6 HOH A 142 842 198 HOH HOH . N 6 HOH A 143 843 218 HOH HOH . N 6 HOH A 144 844 189 HOH HOH . N 6 HOH A 145 845 178 HOH HOH . O 6 HOH B 1 701 69 HOH HOH . O 6 HOH B 2 702 168 HOH HOH . O 6 HOH B 3 703 76 HOH HOH . O 6 HOH B 4 704 223 HOH HOH . O 6 HOH B 5 705 204 HOH HOH . O 6 HOH B 6 706 50 HOH HOH . O 6 HOH B 7 707 33 HOH HOH . O 6 HOH B 8 708 26 HOH HOH . O 6 HOH B 9 709 59 HOH HOH . O 6 HOH B 10 710 16 HOH HOH . O 6 HOH B 11 711 21 HOH HOH . O 6 HOH B 12 712 193 HOH HOH . O 6 HOH B 13 713 126 HOH HOH . O 6 HOH B 14 714 93 HOH HOH . O 6 HOH B 15 715 8 HOH HOH . O 6 HOH B 16 716 101 HOH HOH . O 6 HOH B 17 717 123 HOH HOH . O 6 HOH B 18 718 120 HOH HOH . O 6 HOH B 19 719 186 HOH HOH . O 6 HOH B 20 720 17 HOH HOH . O 6 HOH B 21 721 43 HOH HOH . O 6 HOH B 22 722 108 HOH HOH . O 6 HOH B 23 723 157 HOH HOH . O 6 HOH B 24 724 52 HOH HOH . O 6 HOH B 25 725 118 HOH HOH . O 6 HOH B 26 726 114 HOH HOH . O 6 HOH B 27 727 119 HOH HOH . O 6 HOH B 28 728 217 HOH HOH . O 6 HOH B 29 729 84 HOH HOH . O 6 HOH B 30 730 81 HOH HOH . O 6 HOH B 31 731 25 HOH HOH . O 6 HOH B 32 732 219 HOH HOH . O 6 HOH B 33 733 135 HOH HOH . O 6 HOH B 34 734 146 HOH HOH . O 6 HOH B 35 735 10 HOH HOH . O 6 HOH B 36 736 15 HOH HOH . O 6 HOH B 37 737 28 HOH HOH . O 6 HOH B 38 738 48 HOH HOH . O 6 HOH B 39 739 74 HOH HOH . O 6 HOH B 40 740 122 HOH HOH . O 6 HOH B 41 741 158 HOH HOH . O 6 HOH B 42 742 220 HOH HOH . O 6 HOH B 43 743 40 HOH HOH . O 6 HOH B 44 744 201 HOH HOH . O 6 HOH B 45 745 173 HOH HOH . O 6 HOH B 46 746 73 HOH HOH . O 6 HOH B 47 747 92 HOH HOH . O 6 HOH B 48 748 224 HOH HOH . O 6 HOH B 49 749 202 HOH HOH . O 6 HOH B 50 750 203 HOH HOH . O 6 HOH B 51 751 91 HOH HOH . O 6 HOH B 52 752 87 HOH HOH . O 6 HOH B 53 753 27 HOH HOH . O 6 HOH B 54 754 210 HOH HOH . O 6 HOH B 55 755 175 HOH HOH . O 6 HOH B 56 756 166 HOH HOH . O 6 HOH B 57 757 61 HOH HOH . O 6 HOH B 58 758 125 HOH HOH . O 6 HOH B 59 759 83 HOH HOH . O 6 HOH B 60 760 77 HOH HOH . O 6 HOH B 61 761 144 HOH HOH . O 6 HOH B 62 762 195 HOH HOH . O 6 HOH B 63 763 34 HOH HOH . O 6 HOH B 64 764 41 HOH HOH . O 6 HOH B 65 765 165 HOH HOH . O 6 HOH B 66 766 13 HOH HOH . O 6 HOH B 67 767 197 HOH HOH . O 6 HOH B 68 768 138 HOH HOH . O 6 HOH B 69 769 47 HOH HOH . O 6 HOH B 70 770 137 HOH HOH . O 6 HOH B 71 771 19 HOH HOH . O 6 HOH B 72 772 127 HOH HOH . O 6 HOH B 73 773 139 HOH HOH . O 6 HOH B 74 774 190 HOH HOH . O 6 HOH B 75 775 159 HOH HOH . O 6 HOH B 76 776 192 HOH HOH . O 6 HOH B 77 777 206 HOH HOH . O 6 HOH B 78 778 150 HOH HOH . O 6 HOH B 79 779 160 HOH HOH . O 6 HOH B 80 780 214 HOH HOH . O 6 HOH B 81 781 147 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 20.64 _atom_site.Cartn_y 3.573 _atom_site.Cartn_z 31.886 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #