data_7YTJ # _model_server_result.job_id dk5leuPIk8yCYF3sxu6C1g _model_server_result.datetime_utc '2024-11-25 11:32:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ytj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1002}' # _entry.id 7YTJ # _exptl.entry_id 7YTJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YTJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YTJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 I N N # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 150 n n C1 C6 IHP sing 151 n n C1 O11 IHP sing 152 n n C1 H1 IHP sing 153 n n C2 C3 IHP sing 154 n n C2 O12 IHP sing 155 n n C2 H2 IHP sing 156 n n C3 C4 IHP sing 157 n n C3 O13 IHP sing 158 n n C3 H3 IHP sing 159 n n C4 C5 IHP sing 160 n n C4 O14 IHP sing 161 n n C4 H4 IHP sing 162 n n C5 C6 IHP sing 163 n n C5 O15 IHP sing 164 n n C5 H5 IHP sing 165 n n C6 O16 IHP sing 166 n n C6 H6 IHP sing 167 n n O11 P1 IHP sing 168 n n P1 O21 IHP doub 169 n n P1 O31 IHP sing 170 n n P1 O41 IHP sing 171 n n O31 H31 IHP sing 172 n n O41 H41 IHP sing 173 n n O12 P2 IHP sing 174 n n P2 O22 IHP doub 175 n n P2 O32 IHP sing 176 n n P2 O42 IHP sing 177 n n O32 H32 IHP sing 178 n n O42 H42 IHP sing 179 n n O13 P3 IHP sing 180 n n P3 O23 IHP doub 181 n n P3 O33 IHP sing 182 n n P3 O43 IHP sing 183 n n O33 H33 IHP sing 184 n n O43 H43 IHP sing 185 n n O14 P4 IHP sing 186 n n P4 O24 IHP doub 187 n n P4 O34 IHP sing 188 n n P4 O44 IHP sing 189 n n O34 H34 IHP sing 190 n n O44 H44 IHP sing 191 n n O15 P5 IHP sing 192 n n P5 O25 IHP doub 193 n n P5 O35 IHP sing 194 n n P5 O45 IHP sing 195 n n O35 H35 IHP sing 196 n n O45 H45 IHP sing 197 n n O16 P6 IHP sing 198 n n P6 O26 IHP doub 199 n n P6 O36 IHP sing 200 n n P6 O46 IHP sing 201 n n O36 H36 IHP sing 202 n n O46 H46 IHP sing 203 n n # _atom_sites.entry_id 7YTJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 IHP D 1 1001 1001 IHP IHP . G 4 IHP D 1 1002 1002 IHP IHP . H 5 PC1 D 1 1003 1004 PC1 PC1 . I 4 IHP D 1 1004 1005 IHP IHP . J 6 PO4 D 1 1005 1 PO4 PO4 . K 6 PO4 D 1 1006 2 PO4 PO4 . L 5 PC1 E 1 901 1003 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . G 4 145.413 144.319 182.162 1 88.85 ? C1 IHP 1002 D 1 HETATM 2 C C2 IHP . . . G 4 145.918 145.103 180.95 1 93.23 ? C2 IHP 1002 D 1 HETATM 3 C C3 IHP . . . G 4 146.677 146.338 181.471 1 92.66 ? C3 IHP 1002 D 1 HETATM 4 C C4 IHP . . . G 4 147.922 145.8 182.178 1 88.66 ? C4 IHP 1002 D 1 HETATM 5 C C5 IHP . . . G 4 147.417 145.012 183.391 1 90.73 ? C5 IHP 1002 D 1 HETATM 6 C C6 IHP . . . G 4 146.663 143.782 182.86 1 88.79 ? C6 IHP 1002 D 1 HETATM 7 O O11 IHP . . . G 4 144.792 145.254 183.008 1 94.74 ? O11 IHP 1002 D 1 HETATM 8 P P1 IHP . . . G 4 143.833 144.811 184.277 1 101.85 ? P1 IHP 1002 D 1 HETATM 9 O O21 IHP . . . G 4 142.829 143.776 183.834 1 92.57 ? O21 IHP 1002 D 1 HETATM 10 O O31 IHP . . . G 4 144.662 144.259 185.41 1 95.46 ? O31 IHP 1002 D 1 HETATM 11 O O41 IHP . . . G 4 143.107 146.035 184.776 1 89.32 ? O41 IHP 1002 D 1 HETATM 12 O O12 IHP . . . G 4 144.876 145.387 180.05 1 97.38 ? O12 IHP 1002 D 1 HETATM 13 P P2 IHP . . . G 4 144.718 144.306 178.814 1 105.69 ? P2 IHP 1002 D 1 HETATM 14 O O22 IHP . . . G 4 143.543 143.396 179.079 1 92.93 ? O22 IHP 1002 D 1 HETATM 15 O O32 IHP . . . G 4 144.513 145.038 177.51 1 99.92 ? O32 IHP 1002 D 1 HETATM 16 O O42 IHP . . . G 4 145.97 143.467 178.724 1 90.13 ? O42 IHP 1002 D 1 HETATM 17 O O13 IHP . . . G 4 147.029 147.272 180.478 1 97.51 ? O13 IHP 1002 D 1 HETATM 18 P P3 IHP . . . G 4 147.613 148.739 180.97 1 109.36 ? P3 IHP 1002 D 1 HETATM 19 O O23 IHP . . . G 4 149.069 148.651 181.356 1 91.49 ? O23 IHP 1002 D 1 HETATM 20 O O33 IHP . . . G 4 147.456 149.741 179.851 1 101.17 ? O33 IHP 1002 D 1 HETATM 21 O O43 IHP . . . G 4 146.84 149.213 182.175 1 95.07 ? O43 IHP 1002 D 1 HETATM 22 O O14 IHP . . . G 4 148.557 144.864 181.337 1 94.84 ? O14 IHP 1002 D 1 HETATM 23 P P4 IHP . . . G 4 149.209 145.236 179.861 1 106.73 ? P4 IHP 1002 D 1 HETATM 24 O O24 IHP . . . G 4 148.147 145.341 178.794 1 88.31 ? O24 IHP 1002 D 1 HETATM 25 O O34 IHP . . . G 4 150.157 144.13 179.466 1 96.57 ? O34 IHP 1002 D 1 HETATM 26 O O44 IHP . . . G 4 149.944 146.55 179.939 1 97.66 ? O44 IHP 1002 D 1 HETATM 27 O O15 IHP . . . G 4 148.468 144.69 184.266 1 95.24 ? O15 IHP 1002 D 1 HETATM 28 P P5 IHP . . . G 4 148.522 145.553 185.671 1 101.22 ? P5 IHP 1002 D 1 HETATM 29 O O25 IHP . . . G 4 148.053 146.964 185.411 1 92.91 ? O25 IHP 1002 D 1 HETATM 30 O O35 IHP . . . G 4 147.613 144.916 186.692 1 94.52 ? O35 IHP 1002 D 1 HETATM 31 O O45 IHP . . . G 4 149.937 145.585 186.195 1 92.51 ? O45 IHP 1002 D 1 HETATM 32 O O16 IHP . . . G 4 146.311 142.85 183.851 1 95.53 ? O16 IHP 1002 D 1 HETATM 33 P P6 IHP . . . G 4 146.089 141.277 183.399 1 105.07 ? P6 IHP 1002 D 1 HETATM 34 O O26 IHP . . . G 4 145.364 141.2 182.078 1 92.91 ? O26 IHP 1002 D 1 HETATM 35 O O36 IHP . . . G 4 145.269 140.567 184.447 1 94.78 ? O36 IHP 1002 D 1 HETATM 36 O O46 IHP . . . G 4 147.429 140.595 183.261 1 95.69 ? O46 IHP 1002 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 36 #