data_7YTJ # _model_server_result.job_id tJYWN7wek4VNj8Gd3CtNbw _model_server_result.datetime_utc '2024-11-29 03:04:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ytj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1004}' # _entry.id 7YTJ # _exptl.entry_id 7YTJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YTJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YTJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 I N N # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 150 n n C1 C6 IHP sing 151 n n C1 O11 IHP sing 152 n n C1 H1 IHP sing 153 n n C2 C3 IHP sing 154 n n C2 O12 IHP sing 155 n n C2 H2 IHP sing 156 n n C3 C4 IHP sing 157 n n C3 O13 IHP sing 158 n n C3 H3 IHP sing 159 n n C4 C5 IHP sing 160 n n C4 O14 IHP sing 161 n n C4 H4 IHP sing 162 n n C5 C6 IHP sing 163 n n C5 O15 IHP sing 164 n n C5 H5 IHP sing 165 n n C6 O16 IHP sing 166 n n C6 H6 IHP sing 167 n n O11 P1 IHP sing 168 n n P1 O21 IHP doub 169 n n P1 O31 IHP sing 170 n n P1 O41 IHP sing 171 n n O31 H31 IHP sing 172 n n O41 H41 IHP sing 173 n n O12 P2 IHP sing 174 n n P2 O22 IHP doub 175 n n P2 O32 IHP sing 176 n n P2 O42 IHP sing 177 n n O32 H32 IHP sing 178 n n O42 H42 IHP sing 179 n n O13 P3 IHP sing 180 n n P3 O23 IHP doub 181 n n P3 O33 IHP sing 182 n n P3 O43 IHP sing 183 n n O33 H33 IHP sing 184 n n O43 H43 IHP sing 185 n n O14 P4 IHP sing 186 n n P4 O24 IHP doub 187 n n P4 O34 IHP sing 188 n n P4 O44 IHP sing 189 n n O34 H34 IHP sing 190 n n O44 H44 IHP sing 191 n n O15 P5 IHP sing 192 n n P5 O25 IHP doub 193 n n P5 O35 IHP sing 194 n n P5 O45 IHP sing 195 n n O35 H35 IHP sing 196 n n O45 H45 IHP sing 197 n n O16 P6 IHP sing 198 n n P6 O26 IHP doub 199 n n P6 O36 IHP sing 200 n n P6 O46 IHP sing 201 n n O36 H36 IHP sing 202 n n O46 H46 IHP sing 203 n n # _atom_sites.entry_id 7YTJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 IHP D 1 1001 1001 IHP IHP . G 4 IHP D 1 1002 1002 IHP IHP . H 5 PC1 D 1 1003 1004 PC1 PC1 . I 4 IHP D 1 1004 1005 IHP IHP . J 6 PO4 D 1 1005 1 PO4 PO4 . K 6 PO4 D 1 1006 2 PO4 PO4 . L 5 PC1 E 1 901 1003 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . I 4 131.557 158.686 206.548 1 179.17 ? C1 IHP 1004 D 1 HETATM 2 C C2 IHP . . . I 4 132.687 159.267 207.435 1 179.26 ? C2 IHP 1004 D 1 HETATM 3 C C3 IHP . . . I 4 132.693 158.745 208.878 1 178.77 ? C3 IHP 1004 D 1 HETATM 4 C C4 IHP . . . I 4 132.64 157.218 208.867 1 179.06 ? C4 IHP 1004 D 1 HETATM 5 C C5 IHP . . . I 4 131.245 156.848 208.371 1 178.62 ? C5 IHP 1004 D 1 HETATM 6 C C6 IHP . . . I 4 131.062 157.259 206.902 1 178.89 ? C6 IHP 1004 D 1 HETATM 7 O O11 IHP . . . I 4 130.458 159.571 206.379 1 179.49 ? O11 IHP 1004 D 1 HETATM 8 P P1 IHP . . . I 4 129.563 160.248 207.596 1 181.25 ? P1 IHP 1004 D 1 HETATM 9 O O21 IHP . . . I 4 129.489 159.356 208.81 1 179.2 ? O21 IHP 1004 D 1 HETATM 10 O O31 IHP . . . I 4 130.149 161.582 207.994 1 178.66 ? O31 IHP 1004 D 1 HETATM 11 O O41 IHP . . . I 4 128.162 160.479 207.081 1 179.03 ? O41 IHP 1004 D 1 HETATM 12 O O12 IHP . . . I 4 132.633 160.675 207.434 1 179.77 ? O12 IHP 1004 D 1 HETATM 13 P P2 IHP . . . I 4 133.97 161.516 206.965 1 180.35 ? P2 IHP 1004 D 1 HETATM 14 O O22 IHP . . . I 4 134.038 162.818 207.727 1 179.23 ? O22 IHP 1004 D 1 HETATM 15 O O32 IHP . . . I 4 135.206 160.697 207.252 1 179.14 ? O32 IHP 1004 D 1 HETATM 16 O O42 IHP . . . I 4 133.887 161.803 205.485 1 178.71 ? O42 IHP 1004 D 1 HETATM 17 O O13 IHP . . . I 4 133.852 159.187 209.538 1 179.29 ? O13 IHP 1004 D 1 HETATM 18 P P3 IHP . . . I 4 133.667 160.289 210.75 1 180.59 ? P3 IHP 1004 D 1 HETATM 19 O O23 IHP . . . I 4 135.004 160.561 211.396 1 179.15 ? O23 IHP 1004 D 1 HETATM 20 O O33 IHP . . . I 4 133.113 161.574 210.182 1 179.03 ? O33 IHP 1004 D 1 HETATM 21 O O43 IHP . . . I 4 132.708 159.744 211.78 1 179.28 ? O43 IHP 1004 D 1 HETATM 22 O O14 IHP . . . I 4 133.603 156.755 207.952 1 179.72 ? O14 IHP 1004 D 1 HETATM 23 P P4 IHP . . . I 4 134.314 155.277 208.126 1 180.39 ? P4 IHP 1004 D 1 HETATM 24 O O24 IHP . . . I 4 134.923 155.164 209.503 1 178.81 ? O24 IHP 1004 D 1 HETATM 25 O O34 IHP . . . I 4 135.4 155.132 207.087 1 178.13 ? O34 IHP 1004 D 1 HETATM 26 O O44 IHP . . . I 4 133.303 154.174 207.929 1 177.7 ? O44 IHP 1004 D 1 HETATM 27 O O15 IHP . . . I 4 131.013 155.47 208.519 1 179.41 ? O15 IHP 1004 D 1 HETATM 28 P P5 IHP . . . I 4 130.613 154.904 210.014 1 180.59 ? P5 IHP 1004 D 1 HETATM 29 O O25 IHP . . . I 4 130.348 156.063 210.944 1 177.8 ? O25 IHP 1004 D 1 HETATM 30 O O35 IHP . . . I 4 129.376 154.044 209.914 1 179.67 ? O35 IHP 1004 D 1 HETATM 31 O O45 IHP . . . I 4 131.757 154.08 210.553 1 179.42 ? O45 IHP 1004 D 1 HETATM 32 O O16 IHP . . . I 4 129.7 157.141 206.573 1 179.56 ? O16 IHP 1004 D 1 HETATM 33 P P6 IHP . . . I 4 129.307 156.613 205.063 1 180.07 ? P6 IHP 1004 D 1 HETATM 34 O O26 IHP . . . I 4 130.506 155.939 204.438 1 176.66 ? O26 IHP 1004 D 1 HETATM 35 O O36 IHP . . . I 4 128.885 157.781 204.208 1 178.18 ? O36 IHP 1004 D 1 HETATM 36 O O46 IHP . . . I 4 128.168 155.626 205.156 1 177.39 ? O46 IHP 1004 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 36 #