data_7YUG # _model_server_result.job_id Erpcf1gcmZC4HgYI0qJ67w _model_server_result.datetime_utc '2024-11-26 23:18:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yug # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7YUG # _exptl.entry_id 7YUG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.331 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YUG _cell.length_a 39.65 _cell.length_b 50.041 _cell.length_c 54.092 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YUG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O6' _chem_comp.formula_weight 266.331 _chem_comp.id PG6 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PG6 sing 237 n n C1 H11 PG6 sing 238 n n C1 H12 PG6 sing 239 n n C1 H13 PG6 sing 240 n n O1 C2 PG6 sing 241 n n C2 C3 PG6 sing 242 n n C2 H21 PG6 sing 243 n n C2 H22 PG6 sing 244 n n C3 O2 PG6 sing 245 n n C3 H31 PG6 sing 246 n n C3 H32 PG6 sing 247 n n O2 C4 PG6 sing 248 n n C4 C5 PG6 sing 249 n n C4 H41 PG6 sing 250 n n C4 H42 PG6 sing 251 n n C5 O3 PG6 sing 252 n n C5 H51 PG6 sing 253 n n C5 H52 PG6 sing 254 n n O3 C6 PG6 sing 255 n n C6 C7 PG6 sing 256 n n C6 H61 PG6 sing 257 n n C6 H62 PG6 sing 258 n n C7 O4 PG6 sing 259 n n C7 H71 PG6 sing 260 n n C7 H72 PG6 sing 261 n n O4 C8 PG6 sing 262 n n C8 C9 PG6 sing 263 n n C8 H81 PG6 sing 264 n n C8 H82 PG6 sing 265 n n C9 O5 PG6 sing 266 n n C9 H91 PG6 sing 267 n n C9 H92 PG6 sing 268 n n O5 C10 PG6 sing 269 n n C10 C11 PG6 sing 270 n n C10 H101 PG6 sing 271 n n C10 H102 PG6 sing 272 n n C11 O6 PG6 sing 273 n n C11 H111 PG6 sing 274 n n C11 H112 PG6 sing 275 n n O6 C12 PG6 sing 276 n n C12 H121 PG6 sing 277 n n C12 H122 PG6 sing 278 n n C12 H123 PG6 sing 279 n n # _atom_sites.entry_id 7YUG _atom_sites.fract_transf_matrix[1][1] 0.025221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019984 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018487 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG6 A 1 401 407 PG6 PG6 . C 3 PGE A 1 402 408 PGE PGE . D 4 BR A 1 403 3 BR BR . E 5 CL A 1 404 1 CL CL . F 5 CL A 1 405 2 CL CL . G 6 HOH A 1 501 193 HOH HOH . G 6 HOH A 2 502 183 HOH HOH . G 6 HOH A 3 503 181 HOH HOH . G 6 HOH A 4 504 92 HOH HOH . G 6 HOH A 5 505 168 HOH HOH . G 6 HOH A 6 506 97 HOH HOH . G 6 HOH A 7 507 150 HOH HOH . G 6 HOH A 8 508 65 HOH HOH . G 6 HOH A 9 509 58 HOH HOH . G 6 HOH A 10 510 62 HOH HOH . G 6 HOH A 11 511 173 HOH HOH . G 6 HOH A 12 512 71 HOH HOH . G 6 HOH A 13 513 50 HOH HOH . G 6 HOH A 14 514 105 HOH HOH . G 6 HOH A 15 515 171 HOH HOH . G 6 HOH A 16 516 134 HOH HOH . G 6 HOH A 17 517 52 HOH HOH . G 6 HOH A 18 518 109 HOH HOH . G 6 HOH A 19 519 119 HOH HOH . G 6 HOH A 20 520 25 HOH HOH . G 6 HOH A 21 521 98 HOH HOH . G 6 HOH A 22 522 103 HOH HOH . G 6 HOH A 23 523 74 HOH HOH . G 6 HOH A 24 524 100 HOH HOH . G 6 HOH A 25 525 66 HOH HOH . G 6 HOH A 26 526 15 HOH HOH . G 6 HOH A 27 527 94 HOH HOH . G 6 HOH A 28 528 180 HOH HOH . G 6 HOH A 29 529 88 HOH HOH . G 6 HOH A 30 530 30 HOH HOH . G 6 HOH A 31 531 138 HOH HOH . G 6 HOH A 32 532 10 HOH HOH . G 6 HOH A 33 533 91 HOH HOH . G 6 HOH A 34 534 14 HOH HOH . G 6 HOH A 35 535 81 HOH HOH . G 6 HOH A 36 536 70 HOH HOH . G 6 HOH A 37 537 96 HOH HOH . G 6 HOH A 38 538 11 HOH HOH . G 6 HOH A 39 539 68 HOH HOH . G 6 HOH A 40 540 146 HOH HOH . G 6 HOH A 41 541 188 HOH HOH . G 6 HOH A 42 542 112 HOH HOH . G 6 HOH A 43 543 86 HOH HOH . G 6 HOH A 44 544 31 HOH HOH . G 6 HOH A 45 545 84 HOH HOH . G 6 HOH A 46 546 40 HOH HOH . G 6 HOH A 47 547 5 HOH HOH . G 6 HOH A 48 548 26 HOH HOH . G 6 HOH A 49 549 41 HOH HOH . G 6 HOH A 50 550 42 HOH HOH . G 6 HOH A 51 551 6 HOH HOH . G 6 HOH A 52 552 19 HOH HOH . G 6 HOH A 53 553 36 HOH HOH . G 6 HOH A 54 554 7 HOH HOH . G 6 HOH A 55 555 3 HOH HOH . G 6 HOH A 56 556 145 HOH HOH . G 6 HOH A 57 557 4 HOH HOH . G 6 HOH A 58 558 124 HOH HOH . G 6 HOH A 59 559 114 HOH HOH . G 6 HOH A 60 560 170 HOH HOH . G 6 HOH A 61 561 27 HOH HOH . G 6 HOH A 62 562 43 HOH HOH . G 6 HOH A 63 563 22 HOH HOH . G 6 HOH A 64 564 64 HOH HOH . G 6 HOH A 65 565 186 HOH HOH . G 6 HOH A 66 566 29 HOH HOH . G 6 HOH A 67 567 133 HOH HOH . G 6 HOH A 68 568 56 HOH HOH . G 6 HOH A 69 569 46 HOH HOH . G 6 HOH A 70 570 87 HOH HOH . G 6 HOH A 71 571 33 HOH HOH . G 6 HOH A 72 572 60 HOH HOH . G 6 HOH A 73 573 140 HOH HOH . G 6 HOH A 74 574 47 HOH HOH . G 6 HOH A 75 575 126 HOH HOH . G 6 HOH A 76 576 35 HOH HOH . G 6 HOH A 77 577 107 HOH HOH . G 6 HOH A 78 578 39 HOH HOH . G 6 HOH A 79 579 190 HOH HOH . G 6 HOH A 80 580 67 HOH HOH . G 6 HOH A 81 581 44 HOH HOH . G 6 HOH A 82 582 48 HOH HOH . G 6 HOH A 83 583 101 HOH HOH . G 6 HOH A 84 584 57 HOH HOH . G 6 HOH A 85 585 143 HOH HOH . G 6 HOH A 86 586 139 HOH HOH . G 6 HOH A 87 587 17 HOH HOH . G 6 HOH A 88 588 174 HOH HOH . G 6 HOH A 89 589 12 HOH HOH . G 6 HOH A 90 590 165 HOH HOH . G 6 HOH A 91 591 34 HOH HOH . G 6 HOH A 92 592 191 HOH HOH . G 6 HOH A 93 593 104 HOH HOH . G 6 HOH A 94 594 113 HOH HOH . G 6 HOH A 95 595 80 HOH HOH . G 6 HOH A 96 596 83 HOH HOH . G 6 HOH A 97 597 32 HOH HOH . G 6 HOH A 98 598 153 HOH HOH . G 6 HOH A 99 599 24 HOH HOH . G 6 HOH A 100 600 20 HOH HOH . G 6 HOH A 101 601 144 HOH HOH . G 6 HOH A 102 602 127 HOH HOH . G 6 HOH A 103 603 37 HOH HOH . G 6 HOH A 104 604 131 HOH HOH . G 6 HOH A 105 605 63 HOH HOH . G 6 HOH A 106 606 13 HOH HOH . G 6 HOH A 107 607 53 HOH HOH . G 6 HOH A 108 608 108 HOH HOH . G 6 HOH A 109 609 2 HOH HOH . G 6 HOH A 110 610 38 HOH HOH . G 6 HOH A 111 611 59 HOH HOH . G 6 HOH A 112 612 9 HOH HOH . G 6 HOH A 113 613 158 HOH HOH . G 6 HOH A 114 614 116 HOH HOH . G 6 HOH A 115 615 8 HOH HOH . G 6 HOH A 116 616 28 HOH HOH . G 6 HOH A 117 617 23 HOH HOH . G 6 HOH A 118 618 75 HOH HOH . G 6 HOH A 119 619 1 HOH HOH . G 6 HOH A 120 620 79 HOH HOH . G 6 HOH A 121 621 89 HOH HOH . G 6 HOH A 122 622 164 HOH HOH . G 6 HOH A 123 623 85 HOH HOH . G 6 HOH A 124 624 123 HOH HOH . G 6 HOH A 125 625 90 HOH HOH . G 6 HOH A 126 626 122 HOH HOH . G 6 HOH A 127 627 16 HOH HOH . G 6 HOH A 128 628 18 HOH HOH . G 6 HOH A 129 629 129 HOH HOH . G 6 HOH A 130 630 125 HOH HOH . G 6 HOH A 131 631 152 HOH HOH . G 6 HOH A 132 632 45 HOH HOH . G 6 HOH A 133 633 187 HOH HOH . G 6 HOH A 134 634 73 HOH HOH . G 6 HOH A 135 635 82 HOH HOH . G 6 HOH A 136 636 78 HOH HOH . G 6 HOH A 137 637 176 HOH HOH . G 6 HOH A 138 638 177 HOH HOH . G 6 HOH A 139 639 155 HOH HOH . G 6 HOH A 140 640 54 HOH HOH . G 6 HOH A 141 641 115 HOH HOH . G 6 HOH A 142 642 184 HOH HOH . G 6 HOH A 143 643 175 HOH HOH . G 6 HOH A 144 644 120 HOH HOH . G 6 HOH A 145 645 137 HOH HOH . G 6 HOH A 146 646 95 HOH HOH . G 6 HOH A 147 647 156 HOH HOH . G 6 HOH A 148 648 141 HOH HOH . G 6 HOH A 149 649 163 HOH HOH . G 6 HOH A 150 650 76 HOH HOH . G 6 HOH A 151 651 159 HOH HOH . G 6 HOH A 152 652 117 HOH HOH . G 6 HOH A 153 653 189 HOH HOH . G 6 HOH A 154 654 154 HOH HOH . G 6 HOH A 155 655 128 HOH HOH . G 6 HOH A 156 656 148 HOH HOH . G 6 HOH A 157 657 157 HOH HOH . G 6 HOH A 158 658 121 HOH HOH . G 6 HOH A 159 659 102 HOH HOH . G 6 HOH A 160 660 147 HOH HOH . G 6 HOH A 161 661 136 HOH HOH . G 6 HOH A 162 662 166 HOH HOH . G 6 HOH A 163 663 21 HOH HOH . G 6 HOH A 164 664 106 HOH HOH . G 6 HOH A 165 665 72 HOH HOH . G 6 HOH A 166 666 69 HOH HOH . G 6 HOH A 167 667 192 HOH HOH . G 6 HOH A 168 668 185 HOH HOH . G 6 HOH A 169 669 110 HOH HOH . G 6 HOH A 170 670 49 HOH HOH . G 6 HOH A 171 671 77 HOH HOH . G 6 HOH A 172 672 111 HOH HOH . G 6 HOH A 173 673 118 HOH HOH . G 6 HOH A 174 674 182 HOH HOH . G 6 HOH A 175 675 135 HOH HOH . G 6 HOH A 176 676 167 HOH HOH . G 6 HOH A 177 677 99 HOH HOH . G 6 HOH A 178 678 161 HOH HOH . G 6 HOH A 179 679 61 HOH HOH . G 6 HOH A 180 680 162 HOH HOH . G 6 HOH A 181 681 130 HOH HOH . G 6 HOH A 182 682 55 HOH HOH . G 6 HOH A 183 683 178 HOH HOH . G 6 HOH A 184 684 93 HOH HOH . G 6 HOH A 185 685 51 HOH HOH . G 6 HOH A 186 686 132 HOH HOH . G 6 HOH A 187 687 151 HOH HOH . G 6 HOH A 188 688 179 HOH HOH . G 6 HOH A 189 689 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PG6 . . . B 2 28.873 24.269 32.134 1 13.18 ? C1 PG6 401 A 1 HETATM 2 O O1 PG6 . . . B 2 30.077 24.009 31.42 1 11.85 ? O1 PG6 401 A 1 HETATM 3 C C2 PG6 . . . B 2 31.223 24.447 32.131 1 11.95 ? C2 PG6 401 A 1 HETATM 4 C C3 PG6 . . . B 2 32.426 24.209 31.285 1 11.13 ? C3 PG6 401 A 1 HETATM 5 O O2 PG6 . . . B 2 32.67 22.824 31.075 1 11.46 ? O2 PG6 401 A 1 HETATM 6 C C4 PG6 . . . B 2 33.721 22.581 30.134 1 14.12 ? C4 PG6 401 A 1 HETATM 7 C C5 PG6 . . . B 2 34.048 21.127 30.116 1 14.77 ? C5 PG6 401 A 1 HETATM 8 O O3 PG6 . . . B 2 32.89 20.397 29.742 1 12.66 ? O3 PG6 401 A 1 HETATM 9 C C6 PG6 . . . B 2 33.062 18.987 29.872 1 14.14 ? C6 PG6 401 A 1 HETATM 10 C C7 PG6 . . . B 2 31.731 18.3 29.733 1 16.45 ? C7 PG6 401 A 1 HETATM 11 O O4 PG6 . . . B 2 30.998 18.513 30.943 1 15.7 ? O4 PG6 401 A 1 HETATM 12 C C8 PG6 . . . B 2 29.785 17.779 30.975 1 16.05 ? C8 PG6 401 A 1 HETATM 13 C C9 PG6 . . . B 2 29.091 18.077 32.251 1 18.23 ? C9 PG6 401 A 1 HETATM 14 O O5 PG6 . . . B 2 29.749 17.496 33.37 1 17.14 ? O5 PG6 401 A 1 HETATM 15 C C10 PG6 . . . B 2 29.015 17.858 34.518 1 21.09 ? C10 PG6 401 A 1 HETATM 16 C C11 PG6 . . . B 2 29.619 17.724 35.869 1 28.64 ? C11 PG6 401 A 1 HETATM 17 O O6 PG6 . . . B 2 30.309 16.558 36.155 1 34.59 ? O6 PG6 401 A 1 HETATM 18 C C12 PG6 . . . B 2 29.679 15.582 35.482 1 18.11 ? C12 PG6 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #