data_7YUI # _model_server_result.job_id Yy1rQg2t75anvogB6inl4Q _model_server_result.datetime_utc '2024-11-23 04:45:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yui # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 7YUI # _exptl.entry_id 7YUI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YUI _cell.length_a 58.5 _cell.length_b 90.304 _cell.length_c 117.439 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YUI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 9 B CYS 199 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc2 B SG CYS 12 B CYS 202 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc3 B SG CYS 23 B CYS 213 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc4 B SG CYS 26 B CYS 216 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc5 B SG CYS 92 B CYS 282 1_555 F ZN ZN . B ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc6 B SG CYS 95 B CYS 285 1_555 F ZN ZN . B ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc7 B SG CYS 110 B CYS 300 1_555 G ZN ZN . B ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc8 B SG CYS 118 B CYS 308 1_555 F ZN ZN . B ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc9 B SG CYS 133 B CYS 323 1_555 G ZN ZN . B ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc10 B SG CYS 142 B CYS 332 1_555 G ZN ZN . B ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc11 B SG CYS 181 B CYS 371 1_555 C ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc12 B SG CYS 186 B CYS 376 1_555 C ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc13 B SG CYS 201 B CYS 391 1_555 C ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc14 B SG CYS 204 B CYS 394 1_555 C ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc15 B SG CYS 209 B CYS 399 1_555 E ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc16 B SG CYS 212 B CYS 402 1_555 E ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc17 B NE2 HIS 216 B HIS 406 1_555 E ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc18 B SG CYS 221 B CYS 411 1_555 E ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7YUI _atom_sites.fract_transf_matrix[1][1] 0.017094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN B 1 501 1 ZN ZN . D 3 ZN B 1 502 2 ZN ZN . E 3 ZN B 1 503 3 ZN ZN . F 3 ZN B 1 504 4 ZN ZN . G 3 ZN B 1 505 5 ZN ZN . H 4 HOH A 1 401 72 HOH HOH . H 4 HOH A 2 402 60 HOH HOH . H 4 HOH A 3 403 65 HOH HOH . H 4 HOH A 4 404 68 HOH HOH . H 4 HOH A 5 405 63 HOH HOH . H 4 HOH A 6 406 17 HOH HOH . H 4 HOH A 7 407 15 HOH HOH . H 4 HOH A 8 408 40 HOH HOH . H 4 HOH A 9 409 45 HOH HOH . H 4 HOH A 10 410 70 HOH HOH . H 4 HOH A 11 411 32 HOH HOH . H 4 HOH A 12 412 1 HOH HOH . H 4 HOH A 13 413 6 HOH HOH . H 4 HOH A 14 414 49 HOH HOH . H 4 HOH A 15 415 5 HOH HOH . H 4 HOH A 16 416 27 HOH HOH . H 4 HOH A 17 417 3 HOH HOH . H 4 HOH A 18 418 48 HOH HOH . H 4 HOH A 19 419 20 HOH HOH . H 4 HOH A 20 420 13 HOH HOH . H 4 HOH A 21 421 7 HOH HOH . H 4 HOH A 22 422 2 HOH HOH . H 4 HOH A 23 423 56 HOH HOH . H 4 HOH A 24 424 47 HOH HOH . H 4 HOH A 25 425 41 HOH HOH . H 4 HOH A 26 426 50 HOH HOH . H 4 HOH A 27 427 46 HOH HOH . H 4 HOH A 28 428 69 HOH HOH . H 4 HOH A 29 429 57 HOH HOH . H 4 HOH A 30 430 25 HOH HOH . H 4 HOH A 31 431 37 HOH HOH . H 4 HOH A 32 432 22 HOH HOH . H 4 HOH A 33 433 24 HOH HOH . H 4 HOH A 34 434 36 HOH HOH . H 4 HOH A 35 435 59 HOH HOH . H 4 HOH A 36 436 52 HOH HOH . H 4 HOH A 37 437 31 HOH HOH . H 4 HOH A 38 438 30 HOH HOH . H 4 HOH A 39 439 55 HOH HOH . H 4 HOH A 40 440 53 HOH HOH . I 4 HOH B 1 601 34 HOH HOH . I 4 HOH B 2 602 29 HOH HOH . I 4 HOH B 3 603 4 HOH HOH . I 4 HOH B 4 604 39 HOH HOH . I 4 HOH B 5 605 44 HOH HOH . I 4 HOH B 6 606 8 HOH HOH . I 4 HOH B 7 607 43 HOH HOH . I 4 HOH B 8 608 26 HOH HOH . I 4 HOH B 9 609 54 HOH HOH . I 4 HOH B 10 610 14 HOH HOH . I 4 HOH B 11 611 10 HOH HOH . I 4 HOH B 12 612 35 HOH HOH . I 4 HOH B 13 613 12 HOH HOH . I 4 HOH B 14 614 9 HOH HOH . I 4 HOH B 15 615 11 HOH HOH . I 4 HOH B 16 616 16 HOH HOH . I 4 HOH B 17 617 28 HOH HOH . I 4 HOH B 18 618 23 HOH HOH . I 4 HOH B 19 619 62 HOH HOH . I 4 HOH B 20 620 42 HOH HOH . I 4 HOH B 21 621 38 HOH HOH . I 4 HOH B 22 622 74 HOH HOH . I 4 HOH B 23 623 21 HOH HOH . I 4 HOH B 24 624 71 HOH HOH . I 4 HOH B 25 625 19 HOH HOH . I 4 HOH B 26 626 67 HOH HOH . I 4 HOH B 27 627 61 HOH HOH . I 4 HOH B 28 628 18 HOH HOH . I 4 HOH B 29 629 51 HOH HOH . I 4 HOH B 30 630 58 HOH HOH . I 4 HOH B 31 631 33 HOH HOH . I 4 HOH B 32 632 73 HOH HOH . I 4 HOH B 33 633 64 HOH HOH . I 4 HOH B 34 634 66 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -20.578 _atom_site.Cartn_y 14.976 _atom_site.Cartn_z -16.571 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #