data_7YVA
#
_model_server_result.job_id            OVbfp9OO-Bsoaupsr1TisA 
_model_server_result.datetime_utc      '2024-11-15 04:28:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7yva 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7YVA 
#
_exptl.entry_id    7YVA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.33 
_cell.angle_gamma         90 
_cell.entry_id            7YVA 
_cell.length_a            159.181 
_cell.length_b            56.622 
_cell.length_c            81.839 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YVA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 110 A HIS 109 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc2 A OE1 GLU 174 A GLU 173 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc3 A OE2 GLU 174 A GLU 173 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? 
metalc ? metalc4 A NE2 HIS 226 A HIS 225 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc5 A ND1 HIS 265 A HIS 264 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc6 B NE2 HIS 110 B HIS 109 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc7 B OE1 GLU 174 B GLU 173 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? 
metalc ? metalc8 B OE2 GLU 174 B GLU 173 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
metalc ? metalc9 B NE2 HIS 226 B HIS 225 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc10 B ND1 HIS 265 B HIS 264 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7YVA 
_atom_sites.fract_transf_matrix[1][1]    0.006282 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000697 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017661 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012294 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 401 ZN ZN . 
D 2 ZN B 1 401 401 ZN ZN . 
E 3 LPA B 1 402 501 LPA LPA . 
F 4 EDO B 1 403 502 EDO EDO . 
G 4 EDO B 1 404 503 EDO EDO . 
H 5 HOH A 1 501 96 HOH HOH . 
H 5 HOH A 2 502 54 HOH HOH . 
H 5 HOH A 3 503 47 HOH HOH . 
H 5 HOH A 4 504 104 HOH HOH . 
H 5 HOH A 5 505 68 HOH HOH . 
H 5 HOH A 6 506 18 HOH HOH . 
H 5 HOH A 7 507 53 HOH HOH . 
H 5 HOH A 8 508 42 HOH HOH . 
H 5 HOH A 9 509 62 HOH HOH . 
H 5 HOH A 10 510 40 HOH HOH . 
H 5 HOH A 11 511 57 HOH HOH . 
H 5 HOH A 12 512 77 HOH HOH . 
H 5 HOH A 13 513 103 HOH HOH . 
H 5 HOH A 14 514 16 HOH HOH . 
H 5 HOH A 15 515 24 HOH HOH . 
H 5 HOH A 16 516 17 HOH HOH . 
H 5 HOH A 17 517 11 HOH HOH . 
H 5 HOH A 18 518 101 HOH HOH . 
H 5 HOH A 19 519 61 HOH HOH . 
H 5 HOH A 20 520 99 HOH HOH . 
H 5 HOH A 21 521 22 HOH HOH . 
H 5 HOH A 22 522 78 HOH HOH . 
H 5 HOH A 23 523 1 HOH HOH . 
H 5 HOH A 24 524 70 HOH HOH . 
H 5 HOH A 25 525 84 HOH HOH . 
H 5 HOH A 26 526 64 HOH HOH . 
H 5 HOH A 27 527 66 HOH HOH . 
H 5 HOH A 28 528 55 HOH HOH . 
H 5 HOH A 29 529 39 HOH HOH . 
H 5 HOH A 30 530 13 HOH HOH . 
H 5 HOH A 31 531 48 HOH HOH . 
H 5 HOH A 32 532 37 HOH HOH . 
H 5 HOH A 33 533 46 HOH HOH . 
H 5 HOH A 34 534 97 HOH HOH . 
H 5 HOH A 35 535 35 HOH HOH . 
H 5 HOH A 36 536 87 HOH HOH . 
H 5 HOH A 37 537 91 HOH HOH . 
H 5 HOH A 38 538 52 HOH HOH . 
H 5 HOH A 39 539 60 HOH HOH . 
H 5 HOH A 40 540 9 HOH HOH . 
H 5 HOH A 41 541 29 HOH HOH . 
H 5 HOH A 42 542 41 HOH HOH . 
H 5 HOH A 43 543 38 HOH HOH . 
H 5 HOH A 44 544 32 HOH HOH . 
H 5 HOH A 45 545 102 HOH HOH . 
H 5 HOH A 46 546 49 HOH HOH . 
H 5 HOH A 47 547 63 HOH HOH . 
H 5 HOH A 48 548 27 HOH HOH . 
H 5 HOH A 49 549 79 HOH HOH . 
H 5 HOH A 50 550 81 HOH HOH . 
H 5 HOH A 51 551 34 HOH HOH . 
H 5 HOH A 52 552 36 HOH HOH . 
H 5 HOH A 53 553 8 HOH HOH . 
H 5 HOH A 54 554 100 HOH HOH . 
H 5 HOH A 55 555 5 HOH HOH . 
H 5 HOH A 56 556 30 HOH HOH . 
H 5 HOH A 57 557 74 HOH HOH . 
H 5 HOH A 58 558 10 HOH HOH . 
H 5 HOH A 59 559 33 HOH HOH . 
H 5 HOH A 60 560 93 HOH HOH . 
H 5 HOH A 61 561 67 HOH HOH . 
H 5 HOH A 62 562 107 HOH HOH . 
I 5 HOH B 1 501 106 HOH HOH . 
I 5 HOH B 2 502 105 HOH HOH . 
I 5 HOH B 3 503 20 HOH HOH . 
I 5 HOH B 4 504 14 HOH HOH . 
I 5 HOH B 5 505 28 HOH HOH . 
I 5 HOH B 6 506 44 HOH HOH . 
I 5 HOH B 7 507 31 HOH HOH . 
I 5 HOH B 8 508 15 HOH HOH . 
I 5 HOH B 9 509 73 HOH HOH . 
I 5 HOH B 10 510 7 HOH HOH . 
I 5 HOH B 11 511 4 HOH HOH . 
I 5 HOH B 12 512 65 HOH HOH . 
I 5 HOH B 13 513 58 HOH HOH . 
I 5 HOH B 14 514 23 HOH HOH . 
I 5 HOH B 15 515 80 HOH HOH . 
I 5 HOH B 16 516 19 HOH HOH . 
I 5 HOH B 17 517 59 HOH HOH . 
I 5 HOH B 18 518 95 HOH HOH . 
I 5 HOH B 19 519 25 HOH HOH . 
I 5 HOH B 20 520 94 HOH HOH . 
I 5 HOH B 21 521 69 HOH HOH . 
I 5 HOH B 22 522 75 HOH HOH . 
I 5 HOH B 23 523 83 HOH HOH . 
I 5 HOH B 24 524 43 HOH HOH . 
I 5 HOH B 25 525 26 HOH HOH . 
I 5 HOH B 26 526 72 HOH HOH . 
I 5 HOH B 27 527 89 HOH HOH . 
I 5 HOH B 28 528 56 HOH HOH . 
I 5 HOH B 29 529 98 HOH HOH . 
I 5 HOH B 30 530 3 HOH HOH . 
I 5 HOH B 31 531 76 HOH HOH . 
I 5 HOH B 32 532 86 HOH HOH . 
I 5 HOH B 33 533 71 HOH HOH . 
I 5 HOH B 34 534 45 HOH HOH . 
I 5 HOH B 35 535 2 HOH HOH . 
I 5 HOH B 36 536 88 HOH HOH . 
I 5 HOH B 37 537 90 HOH HOH . 
I 5 HOH B 38 538 12 HOH HOH . 
I 5 HOH B 39 539 51 HOH HOH . 
I 5 HOH B 40 540 108 HOH HOH . 
I 5 HOH B 41 541 82 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -12.45 
_atom_site.Cartn_y               13.108 
_atom_site.Cartn_z               -2.847 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        74.59 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    122 
_model_server_stats.query_time_ms           382 
_model_server_stats.encode_time_ms          62 
_model_server_stats.element_count           1 
#