data_7YW4 # _model_server_result.job_id CAv5-yTdtp4buEvgyHIWsQ _model_server_result.datetime_utc '2024-11-15 09:05:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yw4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 7YW4 # _exptl.entry_id 7YW4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7YW4 _cell.length_a 41.672 _cell.length_b 41.672 _cell.length_c 129.086 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YW4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 365 n n O11 C1 TAR sing 366 n n O11 HO1 TAR sing 367 n n C1 C2 TAR sing 368 n n C2 O2 TAR sing 369 n n C2 C3 TAR sing 370 n n C2 H2 TAR sing 371 n n O2 HO2 TAR sing 372 n n C3 O3 TAR sing 373 n n C3 C4 TAR sing 374 n n C3 H3 TAR sing 375 n n O3 HO3 TAR sing 376 n n C4 O4 TAR doub 377 n n C4 O41 TAR sing 378 n n O41 HO4 TAR sing 379 n n # _atom_sites.entry_id 7YW4 _atom_sites.fract_transf_matrix[1][1] 0.023997 _atom_sites.fract_transf_matrix[1][2] 0.013855 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027709 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007747 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 301 301 NAD NAD . C 3 TAR A 1 302 302 TAR TAR . D 4 HOH A 1 401 14 HOH HOH . D 4 HOH A 2 402 18 HOH HOH . D 4 HOH A 3 403 12 HOH HOH . D 4 HOH A 4 404 1 HOH HOH . D 4 HOH A 5 405 22 HOH HOH . D 4 HOH A 6 406 6 HOH HOH . D 4 HOH A 7 407 21 HOH HOH . D 4 HOH A 8 408 5 HOH HOH . D 4 HOH A 9 409 17 HOH HOH . D 4 HOH A 10 410 8 HOH HOH . D 4 HOH A 11 411 4 HOH HOH . D 4 HOH A 12 412 7 HOH HOH . D 4 HOH A 13 413 10 HOH HOH . D 4 HOH A 14 414 13 HOH HOH . D 4 HOH A 15 415 19 HOH HOH . D 4 HOH A 16 416 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . C 3 1.753 16.76 60.153 1 86.29 -1 O1 TAR 302 A 1 HETATM 2 O O11 TAR . . . C 3 1.113 14.929 61.092 1 86.29 ? O11 TAR 302 A 1 HETATM 3 C C1 TAR . . . C 3 1.953 15.85 60.979 1 86.29 ? C1 TAR 302 A 1 HETATM 4 C C2 TAR . . . C 3 3.229 15.85 61.814 1 86.29 ? C2 TAR 302 A 1 HETATM 5 O O2 TAR . . . C 3 2.919 15.986 63.163 1 86.29 ? O2 TAR 302 A 1 HETATM 6 C C3 TAR . . . C 3 3.95 14.53 61.559 1 86.29 ? C3 TAR 302 A 1 HETATM 7 O O3 TAR . . . C 3 3.104 13.465 61.849 1 86.29 ? O3 TAR 302 A 1 HETATM 8 C C4 TAR . . . C 3 5.166 14.412 62.455 1 86.29 ? C4 TAR 302 A 1 HETATM 9 O O4 TAR . . . C 3 6.303 14.593 61.955 1 86.29 -1 O4 TAR 302 A 1 HETATM 10 O O41 TAR . . . C 3 5.035 14.129 63.674 1 86.29 ? O41 TAR 302 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #