data_7YWU
#
_model_server_result.job_id            DnxTva_rGe9HP1F-gOvU6g 
_model_server_result.datetime_utc      '2025-01-25 08:40:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ywu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":601}' 
#
_entry.id    7YWU 
#
_exptl.entry_id    7YWU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.25 
_cell.angle_gamma         90 
_cell.entry_id            7YWU 
_cell.length_a            149.641 
_cell.length_b            79.429 
_cell.length_c            189.18 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YWU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
? dimeric 2 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,I,J,K,L,M,S,T,U,BA,EA 1 1 
B,C,N,O,P,Q,R,CA,DA 2 1 
E,G,V,W,Y,Z,FA,GA 3 1 
F,H,X,AA,HA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 P N N 
? 2 S N N 
? 2 V N N 
? 2 Y N N 
? 2 AA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 390 A HIS 390 1_555 I C8M FAD . A FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 B NE2 HIS 390 B HIS 390 1_555 O C37 I7I . B I7I 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? 
covale ? covale3 C NE2 HIS 390 C HIS 390 1_555 P C8M FAD . C FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale4 D NE2 HIS 390 D HIS 390 1_555 S C8M FAD . D FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale5 E NE2 HIS 390 E HIS 390 1_555 V C8M FAD . E FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale6 F NE2 HIS 390 F HIS 390 1_555 X C37 I7I . F I7I 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale7 G NE2 HIS 390 G HIS 390 1_555 Y C8M FAD . G FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale8 H NE2 HIS 390 H HIS 390 1_555 AA C8M FAD . H FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 107 n n 
PA O2A FAD sing 108 n n 
PA O5B FAD sing 109 n n 
PA O3P FAD sing 110 n n 
O2A HOA2 FAD sing 111 n n 
O5B C5B FAD sing 112 n n 
C5B C4B FAD sing 113 n n 
C5B H51A FAD sing 114 n n 
C5B H52A FAD sing 115 n n 
C4B O4B FAD sing 116 n n 
C4B C3B FAD sing 117 n n 
C4B H4B FAD sing 118 n n 
O4B C1B FAD sing 119 n n 
C3B O3B FAD sing 120 n n 
C3B C2B FAD sing 121 n n 
C3B H3B FAD sing 122 n n 
O3B HO3A FAD sing 123 n n 
C2B O2B FAD sing 124 n n 
C2B C1B FAD sing 125 n n 
C2B H2B FAD sing 126 n n 
O2B HO2A FAD sing 127 n n 
C1B N9A FAD sing 128 n n 
C1B H1B FAD sing 129 n n 
N9A C8A FAD sing 130 n y 
N9A C4A FAD sing 131 n y 
C8A N7A FAD doub 132 n y 
C8A H8A FAD sing 133 n n 
N7A C5A FAD sing 134 n y 
C5A C6A FAD sing 135 n y 
C5A C4A FAD doub 136 n y 
C6A N6A FAD sing 137 n n 
C6A N1A FAD doub 138 n y 
N6A H61A FAD sing 139 n n 
N6A H62A FAD sing 140 n n 
N1A C2A FAD sing 141 n y 
C2A N3A FAD doub 142 n y 
C2A H2A FAD sing 143 n n 
N3A C4A FAD sing 144 n y 
N1 C2 FAD sing 145 n n 
N1 C10 FAD doub 146 n n 
C2 O2 FAD doub 147 n n 
C2 N3 FAD sing 148 n n 
N3 C4 FAD sing 149 n n 
N3 HN3 FAD sing 150 n n 
C4 O4 FAD doub 151 n n 
C4 C4X FAD sing 152 n n 
C4X N5 FAD doub 153 n n 
C4X C10 FAD sing 154 n n 
N5 C5X FAD sing 155 n n 
C5X C6 FAD doub 156 n y 
C5X C9A FAD sing 157 n y 
C6 C7 FAD sing 158 n y 
C6 H6 FAD sing 159 n n 
C7 C7M FAD sing 160 n n 
C7 C8 FAD doub 161 n y 
C7M HM71 FAD sing 162 n n 
C7M HM72 FAD sing 163 n n 
C7M HM73 FAD sing 164 n n 
C8 C8M FAD sing 165 n n 
C8 C9 FAD sing 166 n y 
C8M HM81 FAD sing 167 n n 
C8M HM82 FAD sing 168 n n 
C8M HM83 FAD sing 169 n n 
C9 C9A FAD doub 170 n y 
C9 H9 FAD sing 171 n n 
C9A N10 FAD sing 172 n n 
N10 C10 FAD sing 173 n n 
N10 C1' FAD sing 174 n n 
C1' C2' FAD sing 175 n n 
C1' "H1'1" FAD sing 176 n n 
C1' "H1'2" FAD sing 177 n n 
C2' O2' FAD sing 178 n n 
C2' C3' FAD sing 179 n n 
C2' H2' FAD sing 180 n n 
O2' HO2' FAD sing 181 n n 
C3' O3' FAD sing 182 n n 
C3' C4' FAD sing 183 n n 
C3' H3' FAD sing 184 n n 
O3' HO3' FAD sing 185 n n 
C4' O4' FAD sing 186 n n 
C4' C5' FAD sing 187 n n 
C4' H4' FAD sing 188 n n 
O4' HO4' FAD sing 189 n n 
C5' O5' FAD sing 190 n n 
C5' "H5'1" FAD sing 191 n n 
C5' "H5'2" FAD sing 192 n n 
O5' P FAD sing 193 n n 
P O1P FAD doub 194 n n 
P O2P FAD sing 195 n n 
P O3P FAD sing 196 n n 
O2P HOP2 FAD sing 197 n n 
#
_atom_sites.entry_id                     7YWU 
_atom_sites.fract_transf_matrix[1][1]    0.006683 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000732 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01259 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005318 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 FAD A 1 601 600 FAD FAD . 
J 3 HEZ A 1 602 801 HEZ HEZ . 
K 3 HEZ A 1 603 1001 HEZ HEZ . 
L 4 GOL A 1 604 1101 GOL GOL . 
M 5 EOL A 1 605 1201 EOL DRU . 
N 3 HEZ B 1 801 801 HEZ HEZ . 
O 6 I7I B 1 802 901 I7I DRG . 
P 2 FAD C 1 601 600 FAD FAD . 
Q 4 GOL C 1 602 801 GOL GOL . 
R 5 EOL C 1 603 901 EOL DRU . 
S 2 FAD D 1 601 600 FAD FAD . 
T 3 HEZ D 1 602 801 HEZ HEZ . 
U 5 EOL D 1 603 901 EOL DRU . 
V 2 FAD E 1 601 600 FAD FAD . 
W 5 EOL E 1 602 701 EOL DRU . 
X 6 I7I F 1 901 901 I7I DRG . 
Y 2 FAD G 1 601 600 FAD FAD . 
Z 5 EOL G 1 602 701 EOL DRU . 
AA 2 FAD H 1 600 600 FAD FAD . 
BA 7 HOH A 1 701 33 HOH HOH . 
BA 7 HOH A 2 702 27 HOH HOH . 
BA 7 HOH A 3 703 8 HOH HOH . 
BA 7 HOH A 4 704 23 HOH HOH . 
BA 7 HOH A 5 705 5 HOH HOH . 
BA 7 HOH A 6 706 35 HOH HOH . 
BA 7 HOH A 7 707 4 HOH HOH . 
BA 7 HOH A 8 708 17 HOH HOH . 
CA 7 HOH B 1 901 32 HOH HOH . 
CA 7 HOH B 2 902 25 HOH HOH . 
CA 7 HOH B 3 903 3 HOH HOH . 
CA 7 HOH B 4 904 24 HOH HOH . 
CA 7 HOH B 5 905 14 HOH HOH . 
DA 7 HOH C 1 701 26 HOH HOH . 
DA 7 HOH C 2 702 7 HOH HOH . 
DA 7 HOH C 3 703 20 HOH HOH . 
DA 7 HOH C 4 704 21 HOH HOH . 
DA 7 HOH C 5 705 37 HOH HOH . 
EA 7 HOH D 1 701 10 HOH HOH . 
EA 7 HOH D 2 702 16 HOH HOH . 
EA 7 HOH D 3 703 28 HOH HOH . 
EA 7 HOH D 4 704 1 HOH HOH . 
EA 7 HOH D 5 705 6 HOH HOH . 
EA 7 HOH D 6 706 18 HOH HOH . 
EA 7 HOH D 7 707 30 HOH HOH . 
EA 7 HOH D 8 708 15 HOH HOH . 
FA 7 HOH E 1 701 36 HOH HOH . 
FA 7 HOH E 2 702 34 HOH HOH . 
GA 7 HOH G 1 701 12 HOH HOH . 
GA 7 HOH G 2 702 11 HOH HOH . 
GA 7 HOH G 3 703 22 HOH HOH . 
GA 7 HOH G 4 704 13 HOH HOH . 
HA 7 HOH H 1 701 31 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . V 2 84.643 -28.983 52.522 1 60.61 ? PA FAD 601 E 1 
HETATM 2 O O1A FAD . . . V 2 84.784 -30.193 53.39 1 61.2 ? O1A FAD 601 E 1 
HETATM 3 O O2A FAD . . . V 2 84.143 -27.713 53.119 1 63.05 ? O2A FAD 601 E 1 
HETATM 4 O O5B FAD . . . V 2 86.03 -28.694 51.777 1 60.57 ? O5B FAD 601 E 1 
HETATM 5 C C5B FAD . . . V 2 86.673 -29.782 51.071 1 58.33 ? C5B FAD 601 E 1 
HETATM 6 C C4B FAD . . . V 2 88.11 -29.852 51.51 1 56.6 ? C4B FAD 601 E 1 
HETATM 7 O O4B FAD . . . V 2 88.852 -28.766 50.894 1 59.08 ? O4B FAD 601 E 1 
HETATM 8 C C3B FAD . . . V 2 88.36 -29.675 53.011 1 56.8 ? C3B FAD 601 E 1 
HETATM 9 O O3B FAD . . . V 2 88.106 -30.856 53.762 1 54.64 ? O3B FAD 601 E 1 
HETATM 10 C C2B FAD . . . V 2 89.823 -29.23 52.98 1 59.31 ? C2B FAD 601 E 1 
HETATM 11 O O2B FAD . . . V 2 90.714 -30.303 52.753 1 56.46 ? O2B FAD 601 E 1 
HETATM 12 C C1B FAD . . . V 2 89.778 -28.234 51.818 1 60.45 ? C1B FAD 601 E 1 
HETATM 13 N N9A FAD . . . V 2 89.335 -26.863 52.16 1 61.49 ? N9A FAD 601 E 1 
HETATM 14 C C8A FAD . . . V 2 88.048 -26.441 52.431 1 62.06 ? C8A FAD 601 E 1 
HETATM 15 N N7A FAD . . . V 2 87.978 -25.153 52.683 1 66.05 ? N7A FAD 601 E 1 
HETATM 16 C C5A FAD . . . V 2 89.286 -24.691 52.551 1 68.32 ? C5A FAD 601 E 1 
HETATM 17 C C6A FAD . . . V 2 89.871 -23.406 52.681 1 65.5 ? C6A FAD 601 E 1 
HETATM 18 N N6A FAD . . . V 2 89.195 -22.296 52.969 1 63.51 ? N6A FAD 601 E 1 
HETATM 19 N N1A FAD . . . V 2 91.206 -23.301 52.471 1 60.76 ? N1A FAD 601 E 1 
HETATM 20 C C2A FAD . . . V 2 91.889 -24.416 52.174 1 63.88 ? C2A FAD 601 E 1 
HETATM 21 N N3A FAD . . . V 2 91.45 -25.668 52.03 1 63.31 ? N3A FAD 601 E 1 
HETATM 22 C C4A FAD . . . V 2 90.124 -25.742 52.23 1 63.77 ? C4A FAD 601 E 1 
HETATM 23 N N1 FAD . . . V 2 81.228 -34.45 45.334 1 39.56 ? N1 FAD 601 E 1 
HETATM 24 C C2 FAD . . . V 2 81.337 -33.877 44.136 1 41.64 ? C2 FAD 601 E 1 
HETATM 25 O O2 FAD . . . V 2 82.299 -33.131 43.875 1 43.81 ? O2 FAD 601 E 1 
HETATM 26 N N3 FAD . . . V 2 80.397 -34.07 43.164 1 40.51 ? N3 FAD 601 E 1 
HETATM 27 C C4 FAD . . . V 2 79.298 -34.864 43.357 1 39.62 ? C4 FAD 601 E 1 
HETATM 28 O O4 FAD . . . V 2 78.486 -34.982 42.451 1 39.33 ? O4 FAD 601 E 1 
HETATM 29 C C4X FAD . . . V 2 79.169 -35.513 44.606 1 40.45 ? C4X FAD 601 E 1 
HETATM 30 N N5 FAD . . . V 2 78.147 -36.304 44.828 1 43.16 ? N5 FAD 601 E 1 
HETATM 31 C C5X FAD . . . V 2 78.085 -36.932 46.047 1 46.77 ? C5X FAD 601 E 1 
HETATM 32 C C6 FAD . . . V 2 77.009 -37.805 46.306 1 50.77 ? C6 FAD 601 E 1 
HETATM 33 C C7 FAD . . . V 2 76.885 -38.479 47.505 1 50.75 ? C7 FAD 601 E 1 
HETATM 34 C C7M FAD . . . V 2 75.717 -39.411 47.727 1 49.51 ? C7M FAD 601 E 1 
HETATM 35 C C8 FAD . . . V 2 77.871 -38.274 48.525 1 50.98 ? C8 FAD 601 E 1 
HETATM 36 C C8M FAD . . . V 2 77.797 -38.994 49.858 1 52.34 ? C8M FAD 601 E 1 
HETATM 37 C C9 FAD . . . V 2 78.915 -37.397 48.284 1 48.71 ? C9 FAD 601 E 1 
HETATM 38 C C9A FAD . . . V 2 79.05 -36.729 47.053 1 46.88 ? C9A FAD 601 E 1 
HETATM 39 N N10 FAD . . . V 2 80.104 -35.861 46.782 1 45.53 ? N10 FAD 601 E 1 
HETATM 40 C C10 FAD . . . V 2 80.208 -35.241 45.561 1 41.09 ? C10 FAD 601 E 1 
HETATM 41 C C1' FAD . . . V 2 81.124 -35.596 47.812 1 47.46 ? C1' FAD 601 E 1 
HETATM 42 C C2' FAD . . . V 2 80.681 -34.494 48.763 1 47.81 ? C2' FAD 601 E 1 
HETATM 43 O O2' FAD . . . V 2 79.36 -34.752 49.226 1 46.44 ? O2' FAD 601 E 1 
HETATM 44 C C3' FAD . . . V 2 80.703 -33.128 48.075 1 51.44 ? C3' FAD 601 E 1 
HETATM 45 O O3' FAD . . . V 2 81.888 -33.011 47.293 1 53.38 ? O3' FAD 601 E 1 
HETATM 46 C C4' FAD . . . V 2 80.622 -31.939 49.035 1 53.95 ? C4' FAD 601 E 1 
HETATM 47 O O4' FAD . . . V 2 79.976 -30.845 48.383 1 53.03 ? O4' FAD 601 E 1 
HETATM 48 C C5' FAD . . . V 2 81.979 -31.469 49.501 1 58.1 ? C5' FAD 601 E 1 
HETATM 49 O O5' FAD . . . V 2 81.859 -30.899 50.829 1 58.83 ? O5' FAD 601 E 1 
HETATM 50 P P FAD . . . V 2 82.161 -29.345 51.052 1 59.52 ? P FAD 601 E 1 
HETATM 51 O O1P FAD . . . V 2 81.511 -29.024 52.353 1 57.59 ? O1P FAD 601 E 1 
HETATM 52 O O2P FAD . . . V 2 81.844 -28.573 49.807 1 57.85 ? O2P FAD 601 E 1 
HETATM 53 O O3P FAD . . . V 2 83.744 -29.352 51.252 1 60.84 ? O3P FAD 601 E 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    56 
_model_server_stats.query_time_ms           250 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           53 
#