data_7YWU
#
_model_server_result.job_id            SJFbMqsV3dqxRO1ObIFZ-w 
_model_server_result.datetime_utc      '2025-01-10 08:54:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ywu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":604}' 
#
_entry.id    7YWU 
#
_exptl.entry_id    7YWU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.25 
_cell.angle_gamma         90 
_cell.entry_id            7YWU 
_cell.length_a            149.641 
_cell.length_b            79.429 
_cell.length_c            189.18 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YWU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
? dimeric 2 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,I,J,K,L,M,S,T,U,BA,EA 1 1 
B,C,N,O,P,Q,R,CA,DA 2 1 
E,G,V,W,Y,Z,FA,GA 3 1 
F,H,X,AA,HA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 L N N 
? 4 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 390 A HIS 390 1_555 I C8M FAD . A FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 B NE2 HIS 390 B HIS 390 1_555 O C37 I7I . B I7I 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? 
covale ? covale3 C NE2 HIS 390 C HIS 390 1_555 P C8M FAD . C FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale4 D NE2 HIS 390 D HIS 390 1_555 S C8M FAD . D FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale5 E NE2 HIS 390 E HIS 390 1_555 V C8M FAD . E FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale6 F NE2 HIS 390 F HIS 390 1_555 X C37 I7I . F I7I 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale7 G NE2 HIS 390 G HIS 390 1_555 Y C8M FAD . G FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale8 H NE2 HIS 390 H HIS 390 1_555 AA C8M FAD . H FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 244 n n 
C1 C2 GOL sing 245 n n 
C1 H11 GOL sing 246 n n 
C1 H12 GOL sing 247 n n 
O1 HO1 GOL sing 248 n n 
C2 O2 GOL sing 249 n n 
C2 C3 GOL sing 250 n n 
C2 H2 GOL sing 251 n n 
O2 HO2 GOL sing 252 n n 
C3 O3 GOL sing 253 n n 
C3 H31 GOL sing 254 n n 
C3 H32 GOL sing 255 n n 
O3 HO3 GOL sing 256 n n 
#
_atom_sites.entry_id                     7YWU 
_atom_sites.fract_transf_matrix[1][1]    0.006683 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000732 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01259 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005318 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 FAD A 1 601 600 FAD FAD . 
J 3 HEZ A 1 602 801 HEZ HEZ . 
K 3 HEZ A 1 603 1001 HEZ HEZ . 
L 4 GOL A 1 604 1101 GOL GOL . 
M 5 EOL A 1 605 1201 EOL DRU . 
N 3 HEZ B 1 801 801 HEZ HEZ . 
O 6 I7I B 1 802 901 I7I DRG . 
P 2 FAD C 1 601 600 FAD FAD . 
Q 4 GOL C 1 602 801 GOL GOL . 
R 5 EOL C 1 603 901 EOL DRU . 
S 2 FAD D 1 601 600 FAD FAD . 
T 3 HEZ D 1 602 801 HEZ HEZ . 
U 5 EOL D 1 603 901 EOL DRU . 
V 2 FAD E 1 601 600 FAD FAD . 
W 5 EOL E 1 602 701 EOL DRU . 
X 6 I7I F 1 901 901 I7I DRG . 
Y 2 FAD G 1 601 600 FAD FAD . 
Z 5 EOL G 1 602 701 EOL DRU . 
AA 2 FAD H 1 600 600 FAD FAD . 
BA 7 HOH A 1 701 33 HOH HOH . 
BA 7 HOH A 2 702 27 HOH HOH . 
BA 7 HOH A 3 703 8 HOH HOH . 
BA 7 HOH A 4 704 23 HOH HOH . 
BA 7 HOH A 5 705 5 HOH HOH . 
BA 7 HOH A 6 706 35 HOH HOH . 
BA 7 HOH A 7 707 4 HOH HOH . 
BA 7 HOH A 8 708 17 HOH HOH . 
CA 7 HOH B 1 901 32 HOH HOH . 
CA 7 HOH B 2 902 25 HOH HOH . 
CA 7 HOH B 3 903 3 HOH HOH . 
CA 7 HOH B 4 904 24 HOH HOH . 
CA 7 HOH B 5 905 14 HOH HOH . 
DA 7 HOH C 1 701 26 HOH HOH . 
DA 7 HOH C 2 702 7 HOH HOH . 
DA 7 HOH C 3 703 20 HOH HOH . 
DA 7 HOH C 4 704 21 HOH HOH . 
DA 7 HOH C 5 705 37 HOH HOH . 
EA 7 HOH D 1 701 10 HOH HOH . 
EA 7 HOH D 2 702 16 HOH HOH . 
EA 7 HOH D 3 703 28 HOH HOH . 
EA 7 HOH D 4 704 1 HOH HOH . 
EA 7 HOH D 5 705 6 HOH HOH . 
EA 7 HOH D 6 706 18 HOH HOH . 
EA 7 HOH D 7 707 30 HOH HOH . 
EA 7 HOH D 8 708 15 HOH HOH . 
FA 7 HOH E 1 701 36 HOH HOH . 
FA 7 HOH E 2 702 34 HOH HOH . 
GA 7 HOH G 1 701 12 HOH HOH . 
GA 7 HOH G 2 702 11 HOH HOH . 
GA 7 HOH G 3 703 22 HOH HOH . 
GA 7 HOH G 4 704 13 HOH HOH . 
HA 7 HOH H 1 701 31 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . L 4 13.926 21.984 17.136 1 56.19 ? C1 GOL 604 A 1 
HETATM 2 O O1 GOL . . . L 4 14.926 22.053 18.153 1 53.07 ? O1 GOL 604 A 1 
HETATM 3 C C2 GOL . . . L 4 13.053 20.751 17.281 1 55.87 ? C2 GOL 604 A 1 
HETATM 4 O O2 GOL . . . L 4 12.654 20.629 18.646 1 56.59 ? O2 GOL 604 A 1 
HETATM 5 C C3 GOL . . . L 4 11.839 20.762 16.363 1 55.36 ? C3 GOL 604 A 1 
HETATM 6 O O3 GOL . . . L 4 11.465 19.456 15.921 1 52.28 ? O3 GOL 604 A 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           6 
#