data_7YXA # _model_server_result.job_id 46KqXuPScx_4E8GVd7kvfQ _model_server_result.datetime_utc '2024-11-04 22:43:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yxa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":2504}' # _entry.id 7YXA # _exptl.entry_id 7YXA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YXA _cell.length_a 59.84 _cell.length_b 103.42 _cell.length_c 187.9 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YXA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,L 1 1 B,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 202 A CYS 175 1_555 A SG CYS 209 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 393 A CYS 277 1_555 A SG CYS 398 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 202 B CYS 175 1_555 B SG CYS 209 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 B SG CYS 393 B CYS 277 1_555 B SG CYS 398 B CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A ND2 ASN 47 A ASN 20 1_555 C C1 NAG . A NAG 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale2 B ND2 ASN 47 B ASN 20 1_555 H C1 NAG . B NAG 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 330 n n C1 O2 OLA sing 331 n n C1 C2 OLA sing 332 n n O2 HO2 OLA sing 333 n n C2 C3 OLA sing 334 n n C2 H21 OLA sing 335 n n C2 H22 OLA sing 336 n n C3 C4 OLA sing 337 n n C3 H31 OLA sing 338 n n C3 H32 OLA sing 339 n n C4 C5 OLA sing 340 n n C4 H41 OLA sing 341 n n C4 H42 OLA sing 342 n n C5 C6 OLA sing 343 n n C5 H51 OLA sing 344 n n C5 H52 OLA sing 345 n n C6 C7 OLA sing 346 n n C6 H61 OLA sing 347 n n C6 H62 OLA sing 348 n n C7 C8 OLA sing 349 n n C7 H71 OLA sing 350 n n C7 H72 OLA sing 351 n n C8 C9 OLA sing 352 n n C8 H81 OLA sing 353 n n C8 H82 OLA sing 354 n n C9 C10 OLA doub 355 z n C9 H9 OLA sing 356 n n C10 C11 OLA sing 357 n n C10 H10 OLA sing 358 n n C11 C12 OLA sing 359 n n C11 H111 OLA sing 360 n n C11 H112 OLA sing 361 n n C12 C13 OLA sing 362 n n C12 H121 OLA sing 363 n n C12 H122 OLA sing 364 n n C13 C14 OLA sing 365 n n C13 H131 OLA sing 366 n n C13 H132 OLA sing 367 n n C14 C15 OLA sing 368 n n C14 H141 OLA sing 369 n n C14 H142 OLA sing 370 n n C15 C16 OLA sing 371 n n C15 H151 OLA sing 372 n n C15 H152 OLA sing 373 n n C16 C17 OLA sing 374 n n C16 H161 OLA sing 375 n n C16 H162 OLA sing 376 n n C17 C18 OLA sing 377 n n C17 H171 OLA sing 378 n n C17 H172 OLA sing 379 n n C18 H181 OLA sing 380 n n C18 H182 OLA sing 381 n n C18 H183 OLA sing 382 n n # _atom_sites.entry_id 7YXA _atom_sites.fract_transf_matrix[1][1] 0.016711 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005322 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 2501 2501 NAG NAG . D 3 B2O A 1 2502 2601 B2O XXX . E 4 OLC A 1 2503 2701 OLC OLC . F 4 OLC A 1 2504 2702 OLC OLC . G 4 OLC A 1 2505 2703 OLC OLC . H 2 NAG B 1 2501 2501 NAG NAG . I 3 B2O B 1 2502 2601 B2O XXX . J 5 OLA B 1 2503 2704 OLA OLA . K 5 OLA B 1 2504 2705 OLA OLA . L 6 HOH A 1 2601 157 HOH HOH . L 6 HOH A 2 2602 121 HOH HOH . L 6 HOH A 3 2603 150 HOH HOH . L 6 HOH A 4 2604 51 HOH HOH . L 6 HOH A 5 2605 81 HOH HOH . L 6 HOH A 6 2606 173 HOH HOH . L 6 HOH A 7 2607 189 HOH HOH . L 6 HOH A 8 2608 165 HOH HOH . L 6 HOH A 9 2609 72 HOH HOH . L 6 HOH A 10 2610 163 HOH HOH . L 6 HOH A 11 2611 9 HOH HOH . L 6 HOH A 12 2612 100 HOH HOH . L 6 HOH A 13 2613 16 HOH HOH . L 6 HOH A 14 2614 93 HOH HOH . L 6 HOH A 15 2615 1 HOH HOH . L 6 HOH A 16 2616 20 HOH HOH . L 6 HOH A 17 2617 115 HOH HOH . L 6 HOH A 18 2618 5 HOH HOH . L 6 HOH A 19 2619 174 HOH HOH . L 6 HOH A 20 2620 108 HOH HOH . L 6 HOH A 21 2621 80 HOH HOH . L 6 HOH A 22 2622 133 HOH HOH . L 6 HOH A 23 2623 120 HOH HOH . L 6 HOH A 24 2624 141 HOH HOH . L 6 HOH A 25 2625 13 HOH HOH . L 6 HOH A 26 2626 154 HOH HOH . L 6 HOH A 27 2627 15 HOH HOH . L 6 HOH A 28 2628 11 HOH HOH . L 6 HOH A 29 2629 22 HOH HOH . L 6 HOH A 30 2630 117 HOH HOH . L 6 HOH A 31 2631 104 HOH HOH . L 6 HOH A 32 2632 78 HOH HOH . L 6 HOH A 33 2633 130 HOH HOH . L 6 HOH A 34 2634 124 HOH HOH . L 6 HOH A 35 2635 2 HOH HOH . L 6 HOH A 36 2636 57 HOH HOH . L 6 HOH A 37 2637 19 HOH HOH . L 6 HOH A 38 2638 119 HOH HOH . L 6 HOH A 39 2639 91 HOH HOH . L 6 HOH A 40 2640 64 HOH HOH . L 6 HOH A 41 2641 10 HOH HOH . L 6 HOH A 42 2642 14 HOH HOH . L 6 HOH A 43 2643 68 HOH HOH . L 6 HOH A 44 2644 175 HOH HOH . L 6 HOH A 45 2645 151 HOH HOH . L 6 HOH A 46 2646 53 HOH HOH . L 6 HOH A 47 2647 171 HOH HOH . L 6 HOH A 48 2648 8 HOH HOH . L 6 HOH A 49 2649 67 HOH HOH . L 6 HOH A 50 2650 137 HOH HOH . L 6 HOH A 51 2651 61 HOH HOH . L 6 HOH A 52 2652 77 HOH HOH . L 6 HOH A 53 2653 50 HOH HOH . L 6 HOH A 54 2654 69 HOH HOH . L 6 HOH A 55 2655 21 HOH HOH . L 6 HOH A 56 2656 136 HOH HOH . L 6 HOH A 57 2657 184 HOH HOH . L 6 HOH A 58 2658 183 HOH HOH . L 6 HOH A 59 2659 88 HOH HOH . L 6 HOH A 60 2660 66 HOH HOH . L 6 HOH A 61 2661 164 HOH HOH . L 6 HOH A 62 2662 12 HOH HOH . L 6 HOH A 63 2663 47 HOH HOH . L 6 HOH A 64 2664 98 HOH HOH . L 6 HOH A 65 2665 177 HOH HOH . L 6 HOH A 66 2666 59 HOH HOH . L 6 HOH A 67 2667 176 HOH HOH . L 6 HOH A 68 2668 73 HOH HOH . L 6 HOH A 69 2669 90 HOH HOH . L 6 HOH A 70 2670 60 HOH HOH . L 6 HOH A 71 2671 7 HOH HOH . L 6 HOH A 72 2672 122 HOH HOH . L 6 HOH A 73 2673 143 HOH HOH . L 6 HOH A 74 2674 86 HOH HOH . L 6 HOH A 75 2675 84 HOH HOH . L 6 HOH A 76 2676 107 HOH HOH . L 6 HOH A 77 2677 17 HOH HOH . L 6 HOH A 78 2678 4 HOH HOH . L 6 HOH A 79 2679 185 HOH HOH . L 6 HOH A 80 2680 178 HOH HOH . L 6 HOH A 81 2681 144 HOH HOH . L 6 HOH A 82 2682 160 HOH HOH . L 6 HOH A 83 2683 65 HOH HOH . L 6 HOH A 84 2684 3 HOH HOH . L 6 HOH A 85 2685 82 HOH HOH . L 6 HOH A 86 2686 153 HOH HOH . L 6 HOH A 87 2687 6 HOH HOH . L 6 HOH A 88 2688 52 HOH HOH . L 6 HOH A 89 2689 138 HOH HOH . L 6 HOH A 90 2690 139 HOH HOH . L 6 HOH A 91 2691 99 HOH HOH . L 6 HOH A 92 2692 156 HOH HOH . L 6 HOH A 93 2693 168 HOH HOH . L 6 HOH A 94 2694 58 HOH HOH . L 6 HOH A 95 2695 179 HOH HOH . L 6 HOH A 96 2696 126 HOH HOH . L 6 HOH A 97 2697 76 HOH HOH . L 6 HOH A 98 2698 145 HOH HOH . L 6 HOH A 99 2699 83 HOH HOH . L 6 HOH A 100 2700 169 HOH HOH . L 6 HOH A 101 2701 188 HOH HOH . L 6 HOH A 102 2702 186 HOH HOH . L 6 HOH A 103 2703 128 HOH HOH . L 6 HOH A 104 2704 190 HOH HOH . L 6 HOH A 105 2705 125 HOH HOH . L 6 HOH A 106 2706 110 HOH HOH . L 6 HOH A 107 2707 192 HOH HOH . L 6 HOH A 108 2708 194 HOH HOH . L 6 HOH A 109 2709 95 HOH HOH . L 6 HOH A 110 2710 127 HOH HOH . L 6 HOH A 111 2711 193 HOH HOH . M 6 HOH B 1 2601 132 HOH HOH . M 6 HOH B 2 2602 105 HOH HOH . M 6 HOH B 3 2603 31 HOH HOH . M 6 HOH B 4 2604 97 HOH HOH . M 6 HOH B 5 2605 111 HOH HOH . M 6 HOH B 6 2606 79 HOH HOH . M 6 HOH B 7 2607 39 HOH HOH . M 6 HOH B 8 2608 29 HOH HOH . M 6 HOH B 9 2609 148 HOH HOH . M 6 HOH B 10 2610 74 HOH HOH . M 6 HOH B 11 2611 30 HOH HOH . M 6 HOH B 12 2612 182 HOH HOH . M 6 HOH B 13 2613 162 HOH HOH . M 6 HOH B 14 2614 35 HOH HOH . M 6 HOH B 15 2615 55 HOH HOH . M 6 HOH B 16 2616 45 HOH HOH . M 6 HOH B 17 2617 40 HOH HOH . M 6 HOH B 18 2618 56 HOH HOH . M 6 HOH B 19 2619 187 HOH HOH . M 6 HOH B 20 2620 62 HOH HOH . M 6 HOH B 21 2621 87 HOH HOH . M 6 HOH B 22 2622 92 HOH HOH . M 6 HOH B 23 2623 112 HOH HOH . M 6 HOH B 24 2624 172 HOH HOH . M 6 HOH B 25 2625 146 HOH HOH . M 6 HOH B 26 2626 49 HOH HOH . M 6 HOH B 27 2627 28 HOH HOH . M 6 HOH B 28 2628 106 HOH HOH . M 6 HOH B 29 2629 71 HOH HOH . M 6 HOH B 30 2630 75 HOH HOH . M 6 HOH B 31 2631 37 HOH HOH . M 6 HOH B 32 2632 23 HOH HOH . M 6 HOH B 33 2633 25 HOH HOH . M 6 HOH B 34 2634 44 HOH HOH . M 6 HOH B 35 2635 38 HOH HOH . M 6 HOH B 36 2636 96 HOH HOH . M 6 HOH B 37 2637 48 HOH HOH . M 6 HOH B 38 2638 24 HOH HOH . M 6 HOH B 39 2639 89 HOH HOH . M 6 HOH B 40 2640 155 HOH HOH . M 6 HOH B 41 2641 32 HOH HOH . M 6 HOH B 42 2642 36 HOH HOH . M 6 HOH B 43 2643 180 HOH HOH . M 6 HOH B 44 2644 116 HOH HOH . M 6 HOH B 45 2645 94 HOH HOH . M 6 HOH B 46 2646 114 HOH HOH . M 6 HOH B 47 2647 109 HOH HOH . M 6 HOH B 48 2648 54 HOH HOH . M 6 HOH B 49 2649 152 HOH HOH . M 6 HOH B 50 2650 43 HOH HOH . M 6 HOH B 51 2651 46 HOH HOH . M 6 HOH B 52 2652 159 HOH HOH . M 6 HOH B 53 2653 18 HOH HOH . M 6 HOH B 54 2654 129 HOH HOH . M 6 HOH B 55 2655 41 HOH HOH . M 6 HOH B 56 2656 102 HOH HOH . M 6 HOH B 57 2657 42 HOH HOH . M 6 HOH B 58 2658 27 HOH HOH . M 6 HOH B 59 2659 147 HOH HOH . M 6 HOH B 60 2660 34 HOH HOH . M 6 HOH B 61 2661 142 HOH HOH . M 6 HOH B 62 2662 33 HOH HOH . M 6 HOH B 63 2663 63 HOH HOH . M 6 HOH B 64 2664 170 HOH HOH . M 6 HOH B 65 2665 131 HOH HOH . M 6 HOH B 66 2666 103 HOH HOH . M 6 HOH B 67 2667 113 HOH HOH . M 6 HOH B 68 2668 101 HOH HOH . M 6 HOH B 69 2669 123 HOH HOH . M 6 HOH B 70 2670 166 HOH HOH . M 6 HOH B 71 2671 140 HOH HOH . M 6 HOH B 72 2672 181 HOH HOH . M 6 HOH B 73 2673 161 HOH HOH . M 6 HOH B 74 2674 191 HOH HOH . M 6 HOH B 75 2675 70 HOH HOH . M 6 HOH B 76 2676 85 HOH HOH . M 6 HOH B 77 2677 167 HOH HOH . M 6 HOH B 78 2678 26 HOH HOH . M 6 HOH B 79 2679 149 HOH HOH . M 6 HOH B 80 2680 135 HOH HOH . M 6 HOH B 81 2681 158 HOH HOH . M 6 HOH B 82 2682 118 HOH HOH . M 6 HOH B 83 2683 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 OLA . . . K 5 30.081 -23.043 9.773 1 47.84 ? C5 OLA 2504 B 1 HETATM 2 C C6 OLA . . . K 5 28.967 -23.271 8.753 1 43.78 ? C6 OLA 2504 B 1 HETATM 3 C C7 OLA . . . K 5 29.086 -24.661 8.133 1 57.82 ? C7 OLA 2504 B 1 HETATM 4 C C8 OLA . . . K 5 28.599 -24.738 6.697 1 66.14 ? C8 OLA 2504 B 1 HETATM 5 C C9 OLA . . . K 5 28.104 -26.131 6.405 1 65.64 ? C9 OLA 2504 B 1 HETATM 6 C C10 OLA . . . K 5 28.046 -26.668 5.187 1 35.83 ? C10 OLA 2504 B 1 HETATM 7 C C11 OLA . . . K 5 28.473 -25.952 3.927 1 59.7 ? C11 OLA 2504 B 1 HETATM 8 C C12 OLA . . . K 5 27.774 -24.61 3.724 1 63.18 ? C12 OLA 2504 B 1 HETATM 9 C C13 OLA . . . K 5 27.305 -24.429 2.273 1 36.37 ? C13 OLA 2504 B 1 HETATM 10 H H51 OLA . . . K 5 30.926 -22.93 9.309 1 57.53 ? H51 OLA 2504 B 1 HETATM 11 H H52 OLA . . . K 5 30.16 -23.816 10.352 1 57.53 ? H52 OLA 2504 B 1 HETATM 12 H H61 OLA . . . K 5 29.021 -22.598 8.057 1 52.65 ? H61 OLA 2504 B 1 HETATM 13 H H62 OLA . . . K 5 28.105 -23.181 9.188 1 52.65 ? H62 OLA 2504 B 1 HETATM 14 H H71 OLA . . . K 5 30.016 -24.936 8.161 1 69.5 ? H71 OLA 2504 B 1 HETATM 15 H H72 OLA . . . K 5 28.574 -25.286 8.669 1 69.5 ? H72 OLA 2504 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #