data_7YXC # _model_server_result.job_id BrGzXTh80MioU8xRe4E35A _model_server_result.datetime_utc '2024-10-13 10:21:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yxc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 7YXC # _exptl.entry_id 7YXC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.62 _cell.angle_gamma 90 _cell.entry_id 7YXC _cell.length_a 86.605 _cell.length_b 52.435 _cell.length_c 69.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YXC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 300 n n O1 HO1 PG4 sing 301 n n C1 C2 PG4 sing 302 n n C1 H11 PG4 sing 303 n n C1 H12 PG4 sing 304 n n C2 O2 PG4 sing 305 n n C2 H21 PG4 sing 306 n n C2 H22 PG4 sing 307 n n O2 C3 PG4 sing 308 n n C3 C4 PG4 sing 309 n n C3 H31 PG4 sing 310 n n C3 H32 PG4 sing 311 n n C4 O3 PG4 sing 312 n n C4 H41 PG4 sing 313 n n C4 H42 PG4 sing 314 n n O3 C5 PG4 sing 315 n n C5 C6 PG4 sing 316 n n C5 H51 PG4 sing 317 n n C5 H52 PG4 sing 318 n n C6 O4 PG4 sing 319 n n C6 H61 PG4 sing 320 n n C6 H62 PG4 sing 321 n n O4 C7 PG4 sing 322 n n C7 C8 PG4 sing 323 n n C7 H71 PG4 sing 324 n n C7 H72 PG4 sing 325 n n C8 O5 PG4 sing 326 n n C8 H81 PG4 sing 327 n n C8 H82 PG4 sing 328 n n O5 HO5 PG4 sing 329 n n # _atom_sites.entry_id 7YXC _atom_sites.fract_transf_matrix[1][1] 0.011547 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005786 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016071 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DEX A 1 1001 1001 DEX DEX . D 4 PG4 A 1 1002 1501 PG4 PG4 . E 5 CO3 A 1 1003 1601 CO3 CO3 . F 5 CO3 A 1 1004 1602 CO3 CO3 . G 6 HOH A 1 1101 2006 HOH HOH . G 6 HOH A 2 1102 2011 HOH HOH . G 6 HOH A 3 1103 2001 HOH HOH . G 6 HOH A 4 1104 2007 HOH HOH . G 6 HOH A 5 1105 2021 HOH HOH . G 6 HOH A 6 1106 2022 HOH HOH . G 6 HOH A 7 1107 2008 HOH HOH . G 6 HOH A 8 1108 2015 HOH HOH . G 6 HOH A 9 1109 2023 HOH HOH . G 6 HOH A 10 1110 2010 HOH HOH . G 6 HOH A 11 1111 2005 HOH HOH . G 6 HOH A 12 1112 2002 HOH HOH . G 6 HOH A 13 1113 2018 HOH HOH . G 6 HOH A 14 1114 2009 HOH HOH . G 6 HOH A 15 1115 2016 HOH HOH . G 6 HOH A 16 1116 2020 HOH HOH . G 6 HOH A 17 1117 2024 HOH HOH . G 6 HOH A 18 1118 2013 HOH HOH . G 6 HOH A 19 1119 2004 HOH HOH . G 6 HOH A 20 1120 2017 HOH HOH . G 6 HOH A 21 1121 2003 HOH HOH . G 6 HOH A 22 1122 2014 HOH HOH . G 6 HOH A 23 1123 2019 HOH HOH . H 6 HOH R 1 101 2012 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 4 8.993 9.39 6.499 1 59.34 ? O1 PG4 1002 A 1 HETATM 2 C C1 PG4 . . . D 4 7.961 9.349 7.535 1 72.28 ? C1 PG4 1002 A 1 HETATM 3 C C2 PG4 . . . D 4 8.461 9.277 8.989 1 46.25 ? C2 PG4 1002 A 1 HETATM 4 O O2 PG4 . . . D 4 9.377 8.186 9.128 1 64.46 ? O2 PG4 1002 A 1 HETATM 5 C C3 PG4 . . . D 4 9.104 7.238 10.16 1 50.62 ? C3 PG4 1002 A 1 HETATM 6 C C4 PG4 . . . D 4 7.943 6.326 9.778 1 45.42 ? C4 PG4 1002 A 1 HETATM 7 O O3 PG4 . . . D 4 8.37 4.969 9.62 1 52.88 ? O3 PG4 1002 A 1 HETATM 8 C C5 PG4 . . . D 4 8.375 4.52 8.257 1 49.09 ? C5 PG4 1002 A 1 HETATM 9 C C6 PG4 . . . D 4 9.76 4.212 7.743 1 59.56 ? C6 PG4 1002 A 1 HETATM 10 O O4 PG4 . . . D 4 9.663 3.102 6.853 1 68.01 ? O4 PG4 1002 A 1 HETATM 11 C C7 PG4 . . . D 4 10.773 2.211 6.873 1 60.69 ? C7 PG4 1002 A 1 HETATM 12 C C8 PG4 . . . D 4 11.296 2.005 8.268 1 71.04 ? C8 PG4 1002 A 1 HETATM 13 O O5 PG4 . . . D 4 10.325 1.557 9.202 1 47.39 ? O5 PG4 1002 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #