data_7YXP # _model_server_result.job_id tED2aOVIsoj7enDMyBseOg _model_server_result.datetime_utc '2024-10-13 10:23:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yxp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1003}' # _entry.id 7YXP # _exptl.entry_id 7YXP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YXP _cell.length_a 178.06 _cell.length_b 178.06 _cell.length_c 178.06 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YXP _symmetry.cell_setting ? _symmetry.Int_Tables_number 214 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 392 n n C C2 TRS sing 393 n n C C3 TRS sing 394 n n C N TRS sing 395 n n C1 O1 TRS sing 396 n n C1 H11 TRS sing 397 n n C1 H12 TRS sing 398 n n C2 O2 TRS sing 399 n n C2 H21 TRS sing 400 n n C2 H22 TRS sing 401 n n C3 O3 TRS sing 402 n n C3 H31 TRS sing 403 n n C3 H32 TRS sing 404 n n N HN1 TRS sing 405 n n N HN2 TRS sing 406 n n N HN3 TRS sing 407 n n O1 HO1 TRS sing 408 n n O2 HO2 TRS sing 409 n n O3 HO3 TRS sing 410 n n # _atom_sites.entry_id 7YXP _atom_sites.fract_transf_matrix[1][1] 0.005616 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005616 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DEX A 1 1001 1001 DEX DEX . D 3 DEX A 1 1002 1002 DEX DEX . E 4 TRS A 1 1003 2001 TRS TRS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . E 4 18.915 -25.509 -22.889 0.5 86.58 ? C TRS 1003 A 1 HETATM 2 C C1 TRS . . . E 4 17.784 -25.783 -21.897 0.5 87.74 ? C1 TRS 1003 A 1 HETATM 3 C C2 TRS . . . E 4 19.293 -24.029 -22.89 0.5 79.56 ? C2 TRS 1003 A 1 HETATM 4 C C3 TRS . . . E 4 18.525 -25.947 -24.301 0.5 81.95 ? C3 TRS 1003 A 1 HETATM 5 N N TRS . . . E 4 20.119 -26.304 -22.458 0.5 82.45 ? N TRS 1003 A 1 HETATM 6 O O1 TRS . . . E 4 18.183 -26.65 -20.84 0.5 78.42 ? O1 TRS 1003 A 1 HETATM 7 O O2 TRS . . . E 4 19.892 -23.659 -24.121 0.5 68.52 ? O2 TRS 1003 A 1 HETATM 8 O O3 TRS . . . E 4 19.304 -25.303 -25.303 0.5 76.64 ? O3 TRS 1003 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #