data_7YY3 # _model_server_result.job_id zN11u5ZKQPek2vY_YOSQ0A _model_server_result.datetime_utc '2024-11-24 21:49:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yy3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 7YY3 # _exptl.entry_id 7YY3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.148 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-fluoroindole-2-carboxylic acid' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YY3 _cell.length_a 75.931 _cell.length_b 125.405 _cell.length_c 119.364 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YY3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -59.682 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # _chem_comp.formula 'C9 H6 F N O2' _chem_comp.formula_weight 179.148 _chem_comp.id FIC _chem_comp.mon_nstd_flag . _chem_comp.name '5-fluoroindole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 O12 FIC sing 83 n n O12 HO12 FIC sing 84 n n O11 C10 FIC doub 85 n n C2 C10 FIC sing 86 n n N1 C2 FIC sing 87 n y C2 C3 FIC doub 88 n y N1 C8 FIC sing 89 n y C9 C3 FIC sing 90 n y C3 H3 FIC sing 91 n n C8 C9 FIC doub 92 n y C9 C4 FIC sing 93 n y C5 C4 FIC doub 94 n y C4 H4 FIC sing 95 n n C6 C5 FIC sing 96 n y C5 F14 FIC sing 97 n n C7 C6 FIC doub 98 n y C6 H6 FIC sing 99 n n C7 C8 FIC sing 100 n y C7 H7 FIC sing 101 n n N1 HN1 FIC sing 102 n n # _atom_sites.entry_id 7YY3 _atom_sites.fract_transf_matrix[1][1] 0.01317 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007974 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008378 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FIC A 1 201 1 FIC LIG . E 3 MG A 1 202 3 MG MG . F 2 FIC B 1 201 2 FIC LIG . G 3 MG B 1 202 2 MG MG . H 2 FIC C 1 201 3 FIC LIG . I 3 MG C 1 202 1 MG MG . J 4 HOH A 1 301 74 HOH HOH . J 4 HOH A 2 302 83 HOH HOH . J 4 HOH A 3 303 151 HOH HOH . J 4 HOH A 4 304 16 HOH HOH . J 4 HOH A 5 305 250 HOH HOH . J 4 HOH A 6 306 60 HOH HOH . J 4 HOH A 7 307 95 HOH HOH . J 4 HOH A 8 308 45 HOH HOH . J 4 HOH A 9 309 249 HOH HOH . J 4 HOH A 10 310 38 HOH HOH . J 4 HOH A 11 311 7 HOH HOH . J 4 HOH A 12 312 40 HOH HOH . J 4 HOH A 13 313 235 HOH HOH . J 4 HOH A 14 314 27 HOH HOH . J 4 HOH A 15 315 57 HOH HOH . J 4 HOH A 16 316 136 HOH HOH . J 4 HOH A 17 317 246 HOH HOH . J 4 HOH A 18 318 66 HOH HOH . J 4 HOH A 19 319 150 HOH HOH . J 4 HOH A 20 320 109 HOH HOH . J 4 HOH A 21 321 179 HOH HOH . J 4 HOH A 22 322 115 HOH HOH . J 4 HOH A 23 323 198 HOH HOH . J 4 HOH A 24 324 90 HOH HOH . J 4 HOH A 25 325 29 HOH HOH . J 4 HOH A 26 326 259 HOH HOH . J 4 HOH A 27 327 275 HOH HOH . J 4 HOH A 28 328 72 HOH HOH . J 4 HOH A 29 329 39 HOH HOH . J 4 HOH A 30 330 283 HOH HOH . J 4 HOH A 31 331 243 HOH HOH . J 4 HOH A 32 332 159 HOH HOH . J 4 HOH A 33 333 20 HOH HOH . J 4 HOH A 34 334 254 HOH HOH . J 4 HOH A 35 335 196 HOH HOH . J 4 HOH A 36 336 153 HOH HOH . J 4 HOH A 37 337 122 HOH HOH . J 4 HOH A 38 338 10 HOH HOH . J 4 HOH A 39 339 164 HOH HOH . J 4 HOH A 40 340 231 HOH HOH . J 4 HOH A 41 341 3 HOH HOH . J 4 HOH A 42 342 195 HOH HOH . J 4 HOH A 43 343 229 HOH HOH . J 4 HOH A 44 344 120 HOH HOH . J 4 HOH A 45 345 2 HOH HOH . J 4 HOH A 46 346 19 HOH HOH . J 4 HOH A 47 347 13 HOH HOH . J 4 HOH A 48 348 62 HOH HOH . J 4 HOH A 49 349 289 HOH HOH . J 4 HOH A 50 350 187 HOH HOH . J 4 HOH A 51 351 230 HOH HOH . J 4 HOH A 52 352 175 HOH HOH . J 4 HOH A 53 353 107 HOH HOH . J 4 HOH A 54 354 5 HOH HOH . J 4 HOH A 55 355 88 HOH HOH . J 4 HOH A 56 356 91 HOH HOH . J 4 HOH A 57 357 133 HOH HOH . J 4 HOH A 58 358 73 HOH HOH . J 4 HOH A 59 359 167 HOH HOH . J 4 HOH A 60 360 106 HOH HOH . J 4 HOH A 61 361 152 HOH HOH . J 4 HOH A 62 362 280 HOH HOH . J 4 HOH A 63 363 123 HOH HOH . J 4 HOH A 64 364 22 HOH HOH . J 4 HOH A 65 365 82 HOH HOH . J 4 HOH A 66 366 256 HOH HOH . J 4 HOH A 67 367 212 HOH HOH . J 4 HOH A 68 368 189 HOH HOH . J 4 HOH A 69 369 116 HOH HOH . J 4 HOH A 70 370 99 HOH HOH . J 4 HOH A 71 371 236 HOH HOH . J 4 HOH A 72 372 101 HOH HOH . J 4 HOH A 73 373 244 HOH HOH . J 4 HOH A 74 374 93 HOH HOH . J 4 HOH A 75 375 75 HOH HOH . J 4 HOH A 76 376 70 HOH HOH . J 4 HOH A 77 377 36 HOH HOH . J 4 HOH A 78 378 55 HOH HOH . J 4 HOH A 79 379 49 HOH HOH . J 4 HOH A 80 380 257 HOH HOH . J 4 HOH A 81 381 127 HOH HOH . J 4 HOH A 82 382 87 HOH HOH . J 4 HOH A 83 383 96 HOH HOH . J 4 HOH A 84 384 97 HOH HOH . J 4 HOH A 85 385 37 HOH HOH . J 4 HOH A 86 386 226 HOH HOH . J 4 HOH A 87 387 117 HOH HOH . J 4 HOH A 88 388 157 HOH HOH . J 4 HOH A 89 389 292 HOH HOH . J 4 HOH A 90 390 85 HOH HOH . J 4 HOH A 91 391 170 HOH HOH . J 4 HOH A 92 392 61 HOH HOH . J 4 HOH A 93 393 218 HOH HOH . J 4 HOH A 94 394 47 HOH HOH . J 4 HOH A 95 395 258 HOH HOH . J 4 HOH A 96 396 238 HOH HOH . J 4 HOH A 97 397 260 HOH HOH . J 4 HOH A 98 398 253 HOH HOH . J 4 HOH A 99 399 277 HOH HOH . J 4 HOH A 100 400 251 HOH HOH . J 4 HOH A 101 401 201 HOH HOH . J 4 HOH A 102 402 217 HOH HOH . J 4 HOH A 103 403 79 HOH HOH . J 4 HOH A 104 404 228 HOH HOH . J 4 HOH A 105 405 262 HOH HOH . J 4 HOH A 106 406 271 HOH HOH . K 4 HOH B 1 301 166 HOH HOH . K 4 HOH B 2 302 1 HOH HOH . K 4 HOH B 3 303 102 HOH HOH . K 4 HOH B 4 304 281 HOH HOH . K 4 HOH B 5 305 173 HOH HOH . K 4 HOH B 6 306 176 HOH HOH . K 4 HOH B 7 307 186 HOH HOH . K 4 HOH B 8 308 145 HOH HOH . K 4 HOH B 9 309 205 HOH HOH . K 4 HOH B 10 310 247 HOH HOH . K 4 HOH B 11 311 156 HOH HOH . K 4 HOH B 12 312 232 HOH HOH . K 4 HOH B 13 313 267 HOH HOH . K 4 HOH B 14 314 89 HOH HOH . K 4 HOH B 15 315 53 HOH HOH . K 4 HOH B 16 316 92 HOH HOH . K 4 HOH B 17 317 11 HOH HOH . K 4 HOH B 18 318 44 HOH HOH . K 4 HOH B 19 319 100 HOH HOH . K 4 HOH B 20 320 241 HOH HOH . K 4 HOH B 21 321 15 HOH HOH . K 4 HOH B 22 322 86 HOH HOH . K 4 HOH B 23 323 25 HOH HOH . K 4 HOH B 24 324 76 HOH HOH . K 4 HOH B 25 325 272 HOH HOH . K 4 HOH B 26 326 94 HOH HOH . K 4 HOH B 27 327 128 HOH HOH . K 4 HOH B 28 328 14 HOH HOH . K 4 HOH B 29 329 8 HOH HOH . K 4 HOH B 30 330 248 HOH HOH . K 4 HOH B 31 331 141 HOH HOH . K 4 HOH B 32 332 154 HOH HOH . K 4 HOH B 33 333 268 HOH HOH . K 4 HOH B 34 334 134 HOH HOH . K 4 HOH B 35 335 190 HOH HOH . K 4 HOH B 36 336 26 HOH HOH . K 4 HOH B 37 337 171 HOH HOH . K 4 HOH B 38 338 112 HOH HOH . K 4 HOH B 39 339 6 HOH HOH . K 4 HOH B 40 340 84 HOH HOH . K 4 HOH B 41 341 21 HOH HOH . K 4 HOH B 42 342 65 HOH HOH . K 4 HOH B 43 343 43 HOH HOH . K 4 HOH B 44 344 185 HOH HOH . K 4 HOH B 45 345 143 HOH HOH . K 4 HOH B 46 346 199 HOH HOH . K 4 HOH B 47 347 30 HOH HOH . K 4 HOH B 48 348 192 HOH HOH . K 4 HOH B 49 349 59 HOH HOH . K 4 HOH B 50 350 220 HOH HOH . K 4 HOH B 51 351 126 HOH HOH . K 4 HOH B 52 352 119 HOH HOH . K 4 HOH B 53 353 155 HOH HOH . K 4 HOH B 54 354 52 HOH HOH . K 4 HOH B 55 355 168 HOH HOH . K 4 HOH B 56 356 208 HOH HOH . K 4 HOH B 57 357 77 HOH HOH . K 4 HOH B 58 358 282 HOH HOH . K 4 HOH B 59 359 162 HOH HOH . K 4 HOH B 60 360 81 HOH HOH . K 4 HOH B 61 361 227 HOH HOH . K 4 HOH B 62 362 56 HOH HOH . K 4 HOH B 63 363 67 HOH HOH . K 4 HOH B 64 364 139 HOH HOH . K 4 HOH B 65 365 140 HOH HOH . K 4 HOH B 66 366 177 HOH HOH . K 4 HOH B 67 367 51 HOH HOH . K 4 HOH B 68 368 58 HOH HOH . K 4 HOH B 69 369 129 HOH HOH . K 4 HOH B 70 370 261 HOH HOH . K 4 HOH B 71 371 219 HOH HOH . K 4 HOH B 72 372 9 HOH HOH . K 4 HOH B 73 373 255 HOH HOH . K 4 HOH B 74 374 288 HOH HOH . K 4 HOH B 75 375 169 HOH HOH . K 4 HOH B 76 376 110 HOH HOH . K 4 HOH B 77 377 223 HOH HOH . K 4 HOH B 78 378 35 HOH HOH . K 4 HOH B 79 379 233 HOH HOH . K 4 HOH B 80 380 12 HOH HOH . K 4 HOH B 81 381 293 HOH HOH . K 4 HOH B 82 382 224 HOH HOH . K 4 HOH B 83 383 270 HOH HOH . K 4 HOH B 84 384 286 HOH HOH . K 4 HOH B 85 385 225 HOH HOH . K 4 HOH B 86 386 180 HOH HOH . K 4 HOH B 87 387 131 HOH HOH . K 4 HOH B 88 388 245 HOH HOH . K 4 HOH B 89 389 111 HOH HOH . K 4 HOH B 90 390 234 HOH HOH . K 4 HOH B 91 391 263 HOH HOH . K 4 HOH B 92 392 147 HOH HOH . K 4 HOH B 93 393 242 HOH HOH . K 4 HOH B 94 394 193 HOH HOH . K 4 HOH B 95 395 182 HOH HOH . K 4 HOH B 96 396 274 HOH HOH . K 4 HOH B 97 397 130 HOH HOH . L 4 HOH C 1 301 197 HOH HOH . L 4 HOH C 2 302 138 HOH HOH . L 4 HOH C 3 303 269 HOH HOH . L 4 HOH C 4 304 206 HOH HOH . L 4 HOH C 5 305 118 HOH HOH . L 4 HOH C 6 306 172 HOH HOH . L 4 HOH C 7 307 148 HOH HOH . L 4 HOH C 8 308 181 HOH HOH . L 4 HOH C 9 309 71 HOH HOH . L 4 HOH C 10 310 142 HOH HOH . L 4 HOH C 11 311 64 HOH HOH . L 4 HOH C 12 312 69 HOH HOH . L 4 HOH C 13 313 4 HOH HOH . L 4 HOH C 14 314 103 HOH HOH . L 4 HOH C 15 315 266 HOH HOH . L 4 HOH C 16 316 213 HOH HOH . L 4 HOH C 17 317 125 HOH HOH . L 4 HOH C 18 318 114 HOH HOH . L 4 HOH C 19 319 158 HOH HOH . L 4 HOH C 20 320 124 HOH HOH . L 4 HOH C 21 321 46 HOH HOH . L 4 HOH C 22 322 18 HOH HOH . L 4 HOH C 23 323 210 HOH HOH . L 4 HOH C 24 324 24 HOH HOH . L 4 HOH C 25 325 160 HOH HOH . L 4 HOH C 26 326 28 HOH HOH . L 4 HOH C 27 327 42 HOH HOH . L 4 HOH C 28 328 204 HOH HOH . L 4 HOH C 29 329 68 HOH HOH . L 4 HOH C 30 330 50 HOH HOH . L 4 HOH C 31 331 23 HOH HOH . L 4 HOH C 32 332 108 HOH HOH . L 4 HOH C 33 333 33 HOH HOH . L 4 HOH C 34 334 239 HOH HOH . L 4 HOH C 35 335 32 HOH HOH . L 4 HOH C 36 336 211 HOH HOH . L 4 HOH C 37 337 144 HOH HOH . L 4 HOH C 38 338 54 HOH HOH . L 4 HOH C 39 339 41 HOH HOH . L 4 HOH C 40 340 290 HOH HOH . L 4 HOH C 41 341 63 HOH HOH . L 4 HOH C 42 342 287 HOH HOH . L 4 HOH C 43 343 121 HOH HOH . L 4 HOH C 44 344 291 HOH HOH . L 4 HOH C 45 345 191 HOH HOH . L 4 HOH C 46 346 178 HOH HOH . L 4 HOH C 47 347 194 HOH HOH . L 4 HOH C 48 348 163 HOH HOH . L 4 HOH C 49 349 214 HOH HOH . L 4 HOH C 50 350 132 HOH HOH . L 4 HOH C 51 351 146 HOH HOH . L 4 HOH C 52 352 203 HOH HOH . L 4 HOH C 53 353 104 HOH HOH . L 4 HOH C 54 354 80 HOH HOH . L 4 HOH C 55 355 161 HOH HOH . L 4 HOH C 56 356 278 HOH HOH . L 4 HOH C 57 357 222 HOH HOH . L 4 HOH C 58 358 252 HOH HOH . L 4 HOH C 59 359 149 HOH HOH . L 4 HOH C 60 360 135 HOH HOH . L 4 HOH C 61 361 165 HOH HOH . L 4 HOH C 62 362 184 HOH HOH . L 4 HOH C 63 363 31 HOH HOH . L 4 HOH C 64 364 240 HOH HOH . L 4 HOH C 65 365 98 HOH HOH . L 4 HOH C 66 366 174 HOH HOH . L 4 HOH C 67 367 202 HOH HOH . L 4 HOH C 68 368 279 HOH HOH . L 4 HOH C 69 369 78 HOH HOH . L 4 HOH C 70 370 273 HOH HOH . L 4 HOH C 71 371 17 HOH HOH . L 4 HOH C 72 372 113 HOH HOH . L 4 HOH C 73 373 34 HOH HOH . L 4 HOH C 74 374 188 HOH HOH . L 4 HOH C 75 375 137 HOH HOH . L 4 HOH C 76 376 105 HOH HOH . L 4 HOH C 77 377 216 HOH HOH . L 4 HOH C 78 378 48 HOH HOH . L 4 HOH C 79 379 264 HOH HOH . L 4 HOH C 80 380 294 HOH HOH . L 4 HOH C 81 381 265 HOH HOH . L 4 HOH C 82 382 276 HOH HOH . L 4 HOH C 83 383 285 HOH HOH . L 4 HOH C 84 384 221 HOH HOH . L 4 HOH C 85 385 237 HOH HOH . L 4 HOH C 86 386 209 HOH HOH . L 4 HOH C 87 387 207 HOH HOH . L 4 HOH C 88 388 215 HOH HOH . L 4 HOH C 89 389 284 HOH HOH . L 4 HOH C 90 390 183 HOH HOH . L 4 HOH C 91 391 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O12 FIC . . . F 2 -20.023 -32.712 -36.083 1 38.15 ? O12 FIC 201 B 1 HETATM 2 C C10 FIC . . . F 2 -19.869 -32.074 -37.16 1 39.65 ? C10 FIC 201 B 1 HETATM 3 O O11 FIC . . . F 2 -19.031 -31.143 -37.284 1 41.84 -1 O11 FIC 201 B 1 HETATM 4 C C2 FIC . . . F 2 -20.756 -32.451 -38.324 1 29.05 ? C2 FIC 201 B 1 HETATM 5 N N1 FIC . . . F 2 -21.41 -33.582 -38.375 1 29.08 ? N1 FIC 201 B 1 HETATM 6 C C3 FIC . . . F 2 -21.005 -31.705 -39.472 1 29.14 ? C3 FIC 201 B 1 HETATM 7 C C9 FIC . . . F 2 -21.889 -32.498 -40.23 1 25.13 ? C9 FIC 201 B 1 HETATM 8 C C4 FIC . . . F 2 -22.518 -32.322 -41.463 1 22.65 ? C4 FIC 201 B 1 HETATM 9 C C5 FIC . . . F 2 -23.358 -33.32 -41.934 1 24.32 ? C5 FIC 201 B 1 HETATM 10 F F14 FIC . . . F 2 -23.973 -33.159 -43.133 1 28.08 ? F14 FIC 201 B 1 HETATM 11 C C6 FIC . . . F 2 -23.589 -34.48 -41.202 1 28.22 ? C6 FIC 201 B 1 HETATM 12 C C7 FIC . . . F 2 -22.967 -34.655 -39.976 1 24.2 ? C7 FIC 201 B 1 HETATM 13 C C8 FIC . . . F 2 -22.119 -33.651 -39.499 1 24.41 ? C8 FIC 201 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #