data_7YYO # _model_server_result.job_id -7qfQLCGR7XuyX6ckvSIcA _model_server_result.datetime_utc '2025-08-31 07:16:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yyo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":500}' # _entry.id 7YYO # _exptl.entry_id 7YYO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YYO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 Q N N ? 3 S N N ? 3 U N N ? 3 W N N ? 3 Y N N ? 3 AA N N ? 3 CA N N ? 3 EA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A CA GLY 395 A GLY 395 1_555 R O4P CAP . A CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale2 C CA GLY 395 C GLY 395 1_555 T O4P CAP . C CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale3 E CA GLY 395 E GLY 395 1_555 V O4P CAP . E CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale4 G CA GLY 395 G GLY 395 1_555 X O4P CAP . G CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale5 I CA GLY 395 I GLY 395 1_555 Z O5P CAP . I CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale6 K CA GLY 395 K GLY 395 1_555 BA O5P CAP . K CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale7 M CA GLY 395 M GLY 395 1_555 DA O5P CAP . M CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale8 O CA GLY 395 O GLY 395 1_555 FA O5P CAP . O CAP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? metalc ? metalc1 A O GLY 373 A GLY 373 1_555 Q MG MG . A MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc2 C O GLY 373 C GLY 373 1_555 S MG MG . C MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc3 E O GLY 373 E GLY 373 1_555 U MG MG . E MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc4 G O GLY 373 G GLY 373 1_555 W MG MG . G MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc5 I O GLY 373 I GLY 373 1_555 Y MG MG . I MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc6 K O GLY 373 K GLY 373 1_555 AA MG MG . K MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc7 M O GLY 373 M GLY 373 1_555 CA MG MG . M MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc8 O O GLY 373 O GLY 373 1_555 EA MG MG . O MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7YYO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 3 MG A 1 500 500 MG MG . R 4 CAP A 1 501 501 CAP CAP . S 3 MG C 1 500 500 MG MG . T 4 CAP C 1 501 501 CAP CAP . U 3 MG E 1 500 500 MG MG . V 4 CAP E 1 501 501 CAP CAP . W 3 MG G 1 500 500 MG MG . X 4 CAP G 1 501 501 CAP CAP . Y 3 MG I 1 500 500 MG MG . Z 4 CAP I 1 501 501 CAP CAP . AA 3 MG K 1 500 500 MG MG . BA 4 CAP K 1 501 501 CAP CAP . CA 3 MG M 1 500 500 MG MG . DA 4 CAP M 1 501 501 CAP CAP . EA 3 MG O 1 500 500 MG MG . FA 4 CAP O 1 501 501 CAP CAP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id CA _atom_site.label_entity_id 3 _atom_site.Cartn_x 94.454 _atom_site.Cartn_y 143.226 _atom_site.Cartn_z 168.9 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 500 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 264 _model_server_stats.query_time_ms 1040 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #