data_7YZS # _model_server_result.job_id gi0KhStCKOSBPI7IZdcX9g _model_server_result.datetime_utc '2024-12-22 20:38:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yzs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7YZS # _exptl.entry_id 7YZS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.22 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-deoxy-6-sulfo-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7YZS _cell.length_a 102.198 _cell.length_b 102.198 _cell.length_c 67.959 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YZS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O8 S' _chem_comp.formula_weight 244.22 _chem_comp.id YZT _chem_comp.mon_nstd_flag . _chem_comp.name 6-deoxy-6-sulfo-beta-D-glucopyranose _chem_comp.type saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 YZT sing 376 n n C1 C2 YZT sing 377 n n C1 O5 YZT sing 378 n n C1 H1 YZT sing 379 n n C2 O2 YZT sing 380 n n C2 C3 YZT sing 381 n n C2 H2 YZT sing 382 n n C3 O3 YZT sing 383 n n C3 C4 YZT sing 384 n n C3 H3 YZT sing 385 n n C4 O4 YZT sing 386 n n C4 C5 YZT sing 387 n n C4 H4 YZT sing 388 n n C5 C6 YZT sing 389 n n C5 H5 YZT sing 390 n n C5 O5 YZT sing 391 n n C6 S6 YZT sing 392 n n C6 H61 YZT sing 393 n n C6 H62 YZT sing 394 n n O1 H1O YZT sing 395 n n O1S6 H1S6 YZT sing 396 n n O1S6 S6 YZT sing 397 n n O2 H2O YZT sing 398 n n O2S6 S6 YZT doub 399 n n O3 H3O YZT sing 400 n n O3S6 S6 YZT doub 401 n n O4 H4O YZT sing 402 n n # _atom_sites.entry_id 7YZS _atom_sites.fract_transf_matrix[1][1] 0.009785 _atom_sites.fract_transf_matrix[1][2] 0.005649 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014715 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YZT AAA 1 401 1 YZT SQV . C 3 HOH AAA 1 501 118 HOH HOH . C 3 HOH AAA 2 502 48 HOH HOH . C 3 HOH AAA 3 503 114 HOH HOH . C 3 HOH AAA 4 504 30 HOH HOH . C 3 HOH AAA 5 505 90 HOH HOH . C 3 HOH AAA 6 506 42 HOH HOH . C 3 HOH AAA 7 507 41 HOH HOH . C 3 HOH AAA 8 508 68 HOH HOH . C 3 HOH AAA 9 509 108 HOH HOH . C 3 HOH AAA 10 510 117 HOH HOH . C 3 HOH AAA 11 511 119 HOH HOH . C 3 HOH AAA 12 512 103 HOH HOH . C 3 HOH AAA 13 513 20 HOH HOH . C 3 HOH AAA 14 514 94 HOH HOH . C 3 HOH AAA 15 515 91 HOH HOH . C 3 HOH AAA 16 516 99 HOH HOH . C 3 HOH AAA 17 517 74 HOH HOH . C 3 HOH AAA 18 518 56 HOH HOH . C 3 HOH AAA 19 519 11 HOH HOH . C 3 HOH AAA 20 520 112 HOH HOH . C 3 HOH AAA 21 521 21 HOH HOH . C 3 HOH AAA 22 522 35 HOH HOH . C 3 HOH AAA 23 523 120 HOH HOH . C 3 HOH AAA 24 524 76 HOH HOH . C 3 HOH AAA 25 525 77 HOH HOH . C 3 HOH AAA 26 526 102 HOH HOH . C 3 HOH AAA 27 527 45 HOH HOH . C 3 HOH AAA 28 528 62 HOH HOH . C 3 HOH AAA 29 529 109 HOH HOH . C 3 HOH AAA 30 530 82 HOH HOH . C 3 HOH AAA 31 531 121 HOH HOH . C 3 HOH AAA 32 532 137 HOH HOH . C 3 HOH AAA 33 533 59 HOH HOH . C 3 HOH AAA 34 534 37 HOH HOH . C 3 HOH AAA 35 535 50 HOH HOH . C 3 HOH AAA 36 536 70 HOH HOH . C 3 HOH AAA 37 537 22 HOH HOH . C 3 HOH AAA 38 538 46 HOH HOH . C 3 HOH AAA 39 539 10 HOH HOH . C 3 HOH AAA 40 540 110 HOH HOH . C 3 HOH AAA 41 541 24 HOH HOH . C 3 HOH AAA 42 542 29 HOH HOH . C 3 HOH AAA 43 543 15 HOH HOH . C 3 HOH AAA 44 544 69 HOH HOH . C 3 HOH AAA 45 545 55 HOH HOH . C 3 HOH AAA 46 546 38 HOH HOH . C 3 HOH AAA 47 547 40 HOH HOH . C 3 HOH AAA 48 548 18 HOH HOH . C 3 HOH AAA 49 549 13 HOH HOH . C 3 HOH AAA 50 550 34 HOH HOH . C 3 HOH AAA 51 551 66 HOH HOH . C 3 HOH AAA 52 552 78 HOH HOH . C 3 HOH AAA 53 553 39 HOH HOH . C 3 HOH AAA 54 554 5 HOH HOH . C 3 HOH AAA 55 555 32 HOH HOH . C 3 HOH AAA 56 556 7 HOH HOH . C 3 HOH AAA 57 557 116 HOH HOH . C 3 HOH AAA 58 558 89 HOH HOH . C 3 HOH AAA 59 559 105 HOH HOH . C 3 HOH AAA 60 560 49 HOH HOH . C 3 HOH AAA 61 561 87 HOH HOH . C 3 HOH AAA 62 562 130 HOH HOH . C 3 HOH AAA 63 563 96 HOH HOH . C 3 HOH AAA 64 564 26 HOH HOH . C 3 HOH AAA 65 565 75 HOH HOH . C 3 HOH AAA 66 566 126 HOH HOH . C 3 HOH AAA 67 567 19 HOH HOH . C 3 HOH AAA 68 568 17 HOH HOH . C 3 HOH AAA 69 569 47 HOH HOH . C 3 HOH AAA 70 570 65 HOH HOH . C 3 HOH AAA 71 571 95 HOH HOH . C 3 HOH AAA 72 572 101 HOH HOH . C 3 HOH AAA 73 573 9 HOH HOH . C 3 HOH AAA 74 574 79 HOH HOH . C 3 HOH AAA 75 575 73 HOH HOH . C 3 HOH AAA 76 576 122 HOH HOH . C 3 HOH AAA 77 577 111 HOH HOH . C 3 HOH AAA 78 578 127 HOH HOH . C 3 HOH AAA 79 579 125 HOH HOH . C 3 HOH AAA 80 580 12 HOH HOH . C 3 HOH AAA 81 581 97 HOH HOH . C 3 HOH AAA 82 582 8 HOH HOH . C 3 HOH AAA 83 583 129 HOH HOH . C 3 HOH AAA 84 584 28 HOH HOH . C 3 HOH AAA 85 585 3 HOH HOH . C 3 HOH AAA 86 586 85 HOH HOH . C 3 HOH AAA 87 587 83 HOH HOH . C 3 HOH AAA 88 588 58 HOH HOH . C 3 HOH AAA 89 589 44 HOH HOH . C 3 HOH AAA 90 590 106 HOH HOH . C 3 HOH AAA 91 591 60 HOH HOH . C 3 HOH AAA 92 592 71 HOH HOH . C 3 HOH AAA 93 593 88 HOH HOH . C 3 HOH AAA 94 594 84 HOH HOH . C 3 HOH AAA 95 595 51 HOH HOH . C 3 HOH AAA 96 596 100 HOH HOH . C 3 HOH AAA 97 597 16 HOH HOH . C 3 HOH AAA 98 598 67 HOH HOH . C 3 HOH AAA 99 599 57 HOH HOH . C 3 HOH AAA 100 600 124 HOH HOH . C 3 HOH AAA 101 601 98 HOH HOH . C 3 HOH AAA 102 602 36 HOH HOH . C 3 HOH AAA 103 603 33 HOH HOH . C 3 HOH AAA 104 604 72 HOH HOH . C 3 HOH AAA 105 605 92 HOH HOH . C 3 HOH AAA 106 606 43 HOH HOH . C 3 HOH AAA 107 607 14 HOH HOH . C 3 HOH AAA 108 608 123 HOH HOH . C 3 HOH AAA 109 609 27 HOH HOH . C 3 HOH AAA 110 610 4 HOH HOH . C 3 HOH AAA 111 611 86 HOH HOH . C 3 HOH AAA 112 612 23 HOH HOH . C 3 HOH AAA 113 613 128 HOH HOH . C 3 HOH AAA 114 614 2 HOH HOH . C 3 HOH AAA 115 615 25 HOH HOH . C 3 HOH AAA 116 616 52 HOH HOH . C 3 HOH AAA 117 617 107 HOH HOH . C 3 HOH AAA 118 618 80 HOH HOH . C 3 HOH AAA 119 619 64 HOH HOH . C 3 HOH AAA 120 620 113 HOH HOH . C 3 HOH AAA 121 621 81 HOH HOH . C 3 HOH AAA 122 622 1 HOH HOH . C 3 HOH AAA 123 623 31 HOH HOH . C 3 HOH AAA 124 624 136 HOH HOH . C 3 HOH AAA 125 625 53 HOH HOH . C 3 HOH AAA 126 626 6 HOH HOH . C 3 HOH AAA 127 627 132 HOH HOH . C 3 HOH AAA 128 628 134 HOH HOH . C 3 HOH AAA 129 629 61 HOH HOH . C 3 HOH AAA 130 630 115 HOH HOH . C 3 HOH AAA 131 631 133 HOH HOH . C 3 HOH AAA 132 632 131 HOH HOH . C 3 HOH AAA 133 633 54 HOH HOH . C 3 HOH AAA 134 634 63 HOH HOH . C 3 HOH AAA 135 635 135 HOH HOH . C 3 HOH AAA 136 636 93 HOH HOH . C 3 HOH AAA 137 637 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 YZT . . . B 2 12.212 -36.481 -4.165 1 24.11 0 C1 YZT 401 AAA 1 HETATM 2 C C2 YZT . . . B 2 12.796 -35.729 -5.385 1 24.47 0 C2 YZT 401 AAA 1 HETATM 3 C C3 YZT . . . B 2 12.671 -34.229 -5.233 1 22.08 0 C3 YZT 401 AAA 1 HETATM 4 C C4 YZT . . . B 2 11.253 -33.864 -4.87 1 20.84 0 C4 YZT 401 AAA 1 HETATM 5 C C5 YZT . . . B 2 10.87 -34.544 -3.572 1 23.62 0 C5 YZT 401 AAA 1 HETATM 6 C C6 YZT . . . B 2 9.46 -34.25 -3.094 1 22.56 0 C6 YZT 401 AAA 1 HETATM 7 O O1 YZT . . . B 2 13.093 -36.457 -3.12 1 33.89 0 O1 YZT 401 AAA 1 HETATM 8 O O1S6 YZT . . . B 2 7.87 -33.884 -1.048 1 22.89 0 O1S6 YZT 401 AAA 1 HETATM 9 O O2 YZT . . . B 2 14.129 -36.192 -5.653 1 22.17 0 O2 YZT 401 AAA 1 HETATM 10 O O2S6 YZT . . . B 2 10.282 -33.892 -0.709 1 27.18 0 O2S6 YZT 401 AAA 1 HETATM 11 O O3 YZT . . . B 2 13.037 -33.527 -6.414 1 22.2 0 O3 YZT 401 AAA 1 HETATM 12 O O3S6 YZT . . . B 2 9.179 -35.974 -1.119 1 20.13 0 O3S6 YZT 401 AAA 1 HETATM 13 O O4 YZT . . . B 2 11.105 -32.464 -4.657 1 18.94 0 O4 YZT 401 AAA 1 HETATM 14 O O5 YZT . . . B 2 10.951 -35.956 -3.728 1 21.58 0 O5 YZT 401 AAA 1 HETATM 15 S S6 YZT . . . B 2 9.183 -34.549 -1.364 1 23.07 0 S6 YZT 401 AAA 1 HETATM 16 H H1 YZT . . . B 2 12.073 -37.426 -4.426 1 25.27 0 H1 YZT 401 AAA 1 HETATM 17 H H1O YZT . . . B 2 13.785 -36.024 -3.367 0 34.36 0 H1O YZT 401 AAA 1 HETATM 18 H H1S6 YZT . . . B 2 7.335 -34.429 -0.786 0 23.01 0 H1S6 YZT 401 AAA 1 HETATM 19 H H2 YZT . . . B 2 12.233 -35.993 -6.15 1 23.47 0 H2 YZT 401 AAA 1 HETATM 20 H H2O YZT . . . B 2 14.647 -35.534 -5.691 0 22.24 0 H2O YZT 401 AAA 1 HETATM 21 H H3 YZT . . . B 2 13.267 -33.938 -4.497 1 22.29 0 H3 YZT 401 AAA 1 HETATM 22 H H3O YZT . . . B 2 12.389 -33.055 -6.665 0 22.27 0 H3O YZT 401 AAA 1 HETATM 23 H H4 YZT . . . B 2 10.646 -34.153 -5.591 1 21.19 0 H4 YZT 401 AAA 1 HETATM 24 H H4O YZT . . . B 2 10.845 -32.333 -3.872 0 18.86 0 H4O YZT 401 AAA 1 HETATM 25 H H5 YZT . . . B 2 11.507 -34.263 -2.87 1 22.49 0 H5 YZT 401 AAA 1 HETATM 26 H H61 YZT . . . B 2 9.253 -33.312 -3.286 1 22.91 0 H61 YZT 401 AAA 1 HETATM 27 H H62 YZT . . . B 2 8.835 -34.801 -3.611 1 22.92 0 H62 YZT 401 AAA 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 27 #