data_7Z0I # _model_server_result.job_id ZVtCWPwHvyqiocLY7Myh0Q _model_server_result.datetime_utc '2024-11-14 03:54:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z0i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7Z0I # _exptl.entry_id 7Z0I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z0I _cell.length_a 43.949 _cell.length_b 43.949 _cell.length_c 86.78 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z0I _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 14 A HIS 274 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc2 A OE1 GLU 28 A GLU 288 1_555 B ZN ZN . A ZN 401 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc3 A OE2 GLU 28 A GLU 288 1_555 B ZN ZN . A ZN 401 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc4 B ZN ZN . A ZN 401 1_555 D O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc5 B ZN ZN . A ZN 401 1_555 D O HOH . A HOH 538 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc6 B ZN ZN . A ZN 401 1_555 D O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 7Z0I _atom_sites.fract_transf_matrix[1][1] 0.022754 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022754 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011523 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 3 EDO A 1 402 2 EDO EDO . D 4 HOH A 1 501 22 HOH HOH . D 4 HOH A 2 502 38 HOH HOH . D 4 HOH A 3 503 1 HOH HOH . D 4 HOH A 4 504 59 HOH HOH . D 4 HOH A 5 505 7 HOH HOH . D 4 HOH A 6 506 49 HOH HOH . D 4 HOH A 7 507 52 HOH HOH . D 4 HOH A 8 508 55 HOH HOH . D 4 HOH A 9 509 2 HOH HOH . D 4 HOH A 10 510 12 HOH HOH . D 4 HOH A 11 511 4 HOH HOH . D 4 HOH A 12 512 56 HOH HOH . D 4 HOH A 13 513 8 HOH HOH . D 4 HOH A 14 514 50 HOH HOH . D 4 HOH A 15 515 14 HOH HOH . D 4 HOH A 16 516 27 HOH HOH . D 4 HOH A 17 517 16 HOH HOH . D 4 HOH A 18 518 61 HOH HOH . D 4 HOH A 19 519 13 HOH HOH . D 4 HOH A 20 520 29 HOH HOH . D 4 HOH A 21 521 11 HOH HOH . D 4 HOH A 22 522 6 HOH HOH . D 4 HOH A 23 523 9 HOH HOH . D 4 HOH A 24 524 5 HOH HOH . D 4 HOH A 25 525 10 HOH HOH . D 4 HOH A 26 526 48 HOH HOH . D 4 HOH A 27 527 57 HOH HOH . D 4 HOH A 28 528 17 HOH HOH . D 4 HOH A 29 529 26 HOH HOH . D 4 HOH A 30 530 28 HOH HOH . D 4 HOH A 31 531 41 HOH HOH . D 4 HOH A 32 532 20 HOH HOH . D 4 HOH A 33 533 35 HOH HOH . D 4 HOH A 34 534 44 HOH HOH . D 4 HOH A 35 535 54 HOH HOH . D 4 HOH A 36 536 24 HOH HOH . D 4 HOH A 37 537 25 HOH HOH . D 4 HOH A 38 538 23 HOH HOH . D 4 HOH A 39 539 19 HOH HOH . D 4 HOH A 40 540 30 HOH HOH . D 4 HOH A 41 541 47 HOH HOH . D 4 HOH A 42 542 15 HOH HOH . D 4 HOH A 43 543 33 HOH HOH . D 4 HOH A 44 544 60 HOH HOH . D 4 HOH A 45 545 62 HOH HOH . D 4 HOH A 46 546 3 HOH HOH . D 4 HOH A 47 547 45 HOH HOH . D 4 HOH A 48 548 64 HOH HOH . D 4 HOH A 49 549 53 HOH HOH . D 4 HOH A 50 550 63 HOH HOH . D 4 HOH A 51 551 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 4.69 17.023 11.827 1 43.84 0 C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . C 3 5.982 16.67 12.267 1 51.64 0 O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . C 3 3.712 15.955 12.12 1 48.72 0 C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . C 3 3.794 14.87 11.225 1 44.86 0 O2 EDO 402 A 1 HETATM 5 H H11 EDO . . . C 3 4.709 17.185 10.861 1 46.7 0 H11 EDO 402 A 1 HETATM 6 H H12 EDO . . . C 3 4.41 17.848 12.274 1 46.67 0 H12 EDO 402 A 1 HETATM 7 H HO1 EDO . . . C 3 6.525 17.311 12.14 0 51.85 0 HO1 EDO 402 A 1 HETATM 8 H H21 EDO . . . C 3 2.814 16.334 12.078 1 46.42 0 H21 EDO 402 A 1 HETATM 9 H H22 EDO . . . C 3 3.863 15.629 13.031 1 46.57 0 H22 EDO 402 A 1 HETATM 10 H HO2 EDO . . . C 3 4.535 14.475 11.33 1 46.01 0 HO2 EDO 402 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 10 #