data_7Z0Y # _model_server_result.job_id yjvW_g-u51bTBOUtBz-hDQ _model_server_result.datetime_utc '2024-11-09 02:48:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 7Z0Y # _exptl.entry_id 7Z0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z0Y _cell.length_a 126.157 _cell.length_b 126.157 _cell.length_c 167.454 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 3 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 A 1 NAG R 1343 NAG 4 n D NAG 2 A 2 NAG R 1344 NAG 4 n D FUC 3 A 3 FUC R 1345 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 150 H CYS 140 1_555 A SG CYS 206 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 22 L CYS 23 1_555 B SG CYS 90 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 B SG CYS 136 L CYS 134 1_555 B SG CYS 195 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 C SG CYS 7 R CYS 336 1_555 C SG CYS 32 R CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 C SG CYS 50 R CYS 379 1_555 C SG CYS 103 R CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf7 C SG CYS 62 R CYS 391 1_555 C SG CYS 196 R CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 C SG CYS 151 R CYS 480 1_555 C SG CYS 159 R CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A C PCA 1 H PCA 1 1_555 A N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 B C PCA 1 L PCA 1 1_555 B N SER 2 L SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 C ND2 ASN 14 R ASN 343 1_555 D C1 NAG . A NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale4 D O4 NAG . A NAG 1 1_555 D C1 NAG . A NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale5 D O6 NAG . A NAG 1 1_555 D C1 FUC . A FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 359 n n S O2 SO4 doub 360 n n S O3 SO4 sing 361 n n S O4 SO4 sing 362 n n # _atom_sites.entry_id 7Z0Y _atom_sites.fract_transf_matrix[1][1] 0.007927 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007927 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005972 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 SO4 L 1 301 2 SO4 SO4 . F 5 SO4 R 1 601 1 SO4 SO4 . G 6 HOH H 1 301 38 HOH HOH . G 6 HOH H 2 302 47 HOH HOH . G 6 HOH H 3 303 21 HOH HOH . G 6 HOH H 4 304 12 HOH HOH . G 6 HOH H 5 305 66 HOH HOH . G 6 HOH H 6 306 11 HOH HOH . G 6 HOH H 7 307 7 HOH HOH . G 6 HOH H 8 308 50 HOH HOH . G 6 HOH H 9 309 35 HOH HOH . G 6 HOH H 10 310 45 HOH HOH . G 6 HOH H 11 311 44 HOH HOH . G 6 HOH H 12 312 10 HOH HOH . G 6 HOH H 13 313 13 HOH HOH . G 6 HOH H 14 314 43 HOH HOH . G 6 HOH H 15 315 8 HOH HOH . H 6 HOH L 1 401 63 HOH HOH . H 6 HOH L 2 402 41 HOH HOH . H 6 HOH L 3 403 24 HOH HOH . H 6 HOH L 4 404 27 HOH HOH . H 6 HOH L 5 405 26 HOH HOH . H 6 HOH L 6 406 48 HOH HOH . H 6 HOH L 7 407 49 HOH HOH . H 6 HOH L 8 408 40 HOH HOH . H 6 HOH L 9 409 6 HOH HOH . H 6 HOH L 10 410 51 HOH HOH . H 6 HOH L 11 411 1 HOH HOH . H 6 HOH L 12 412 3 HOH HOH . H 6 HOH L 13 413 23 HOH HOH . H 6 HOH L 14 414 2 HOH HOH . H 6 HOH L 15 415 36 HOH HOH . H 6 HOH L 16 416 22 HOH HOH . H 6 HOH L 17 417 29 HOH HOH . H 6 HOH L 18 418 52 HOH HOH . H 6 HOH L 19 419 46 HOH HOH . I 6 HOH R 1 701 61 HOH HOH . I 6 HOH R 2 702 64 HOH HOH . I 6 HOH R 3 703 42 HOH HOH . I 6 HOH R 4 704 39 HOH HOH . I 6 HOH R 5 705 31 HOH HOH . I 6 HOH R 6 706 34 HOH HOH . I 6 HOH R 7 707 54 HOH HOH . I 6 HOH R 8 708 57 HOH HOH . I 6 HOH R 9 709 19 HOH HOH . I 6 HOH R 10 710 37 HOH HOH . I 6 HOH R 11 711 65 HOH HOH . I 6 HOH R 12 712 14 HOH HOH . I 6 HOH R 13 713 55 HOH HOH . I 6 HOH R 14 714 25 HOH HOH . I 6 HOH R 15 715 62 HOH HOH . I 6 HOH R 16 716 60 HOH HOH . I 6 HOH R 17 717 33 HOH HOH . I 6 HOH R 18 718 32 HOH HOH . I 6 HOH R 19 719 18 HOH HOH . I 6 HOH R 20 720 4 HOH HOH . I 6 HOH R 21 721 5 HOH HOH . I 6 HOH R 22 722 17 HOH HOH . I 6 HOH R 23 723 30 HOH HOH . I 6 HOH R 24 724 9 HOH HOH . I 6 HOH R 25 725 59 HOH HOH . I 6 HOH R 26 726 58 HOH HOH . I 6 HOH R 27 727 53 HOH HOH . I 6 HOH R 28 728 16 HOH HOH . I 6 HOH R 29 729 28 HOH HOH . I 6 HOH R 30 730 15 HOH HOH . I 6 HOH R 31 731 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 5 -6.85 -4.541 -4.696 1 100.95 ? S SO4 601 R 1 HETATM 2 O O1 SO4 . . . F 5 -6.352 -5.573 -5.561 1 83.96 ? O1 SO4 601 R 1 HETATM 3 O O2 SO4 . . . F 5 -7.124 -3.361 -5.464 1 73.68 ? O2 SO4 601 R 1 HETATM 4 O O3 SO4 . . . F 5 -8.056 -4.992 -4.062 1 94.07 ? O3 SO4 601 R 1 HETATM 5 O O4 SO4 . . . F 5 -5.868 -4.243 -3.694 1 88.99 ? O4 SO4 601 R 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #