data_7Z1F # _model_server_result.job_id DpcCiRLjGIn0gWErxykitQ _model_server_result.datetime_utc '2025-01-10 17:52:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z1f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 7Z1F # _exptl.entry_id 7Z1F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 349.77 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7Z1F _cell.length_a 86.001 _cell.length_b 86.001 _cell.length_c 237.735 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z1F _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 190 A SER 215 1_555 A N PTR 191 A PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C PTR 191 A PTR 216 1_555 A N ILE 192 A ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B C SER 190 B SER 215 1_555 B N PTR 191 B PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B C PTR 191 B PTR 216 1_555 B N ILE 192 B ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? metalc ? metalc1 A OD2 ASP 156 A ASP 181 1_555 E Y YT3 . A YT3 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? metalc ? metalc2 A OD2 ASP 175 A ASP 200 1_555 E Y YT3 . A YT3 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc3 A OD2 ASP 235 A ASP 260 1_555 F Y YT3 . A YT3 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc4 A OD1 ASP 239 A ASP 264 1_555 F Y YT3 . A YT3 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? metalc ? metalc5 A OD2 ASP 239 A ASP 264 1_555 F Y YT3 . A YT3 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 A OE2 GLU 243 A GLU 268 1_555 F Y YT3 . A YT3 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc7 E Y YT3 . A YT3 403 1_555 J O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? metalc ? metalc8 F Y YT3 . A YT3 404 1_555 J O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc9 F Y YT3 . A YT3 404 1_655 B O HIS 356 B HIS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.269 ? metalc ? metalc10 B OD2 ASP 156 B ASP 181 1_555 H Y YT3 . B YT3 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc11 B OD2 ASP 175 B ASP 200 1_555 H Y YT3 . B YT3 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc12 B OD1 ASP 239 B ASP 264 1_555 I Y YT3 . B YT3 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.217 ? metalc ? metalc13 B OD2 ASP 239 B ASP 264 1_555 I Y YT3 . B YT3 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc14 B OE2 GLU 243 B GLU 268 1_555 I Y YT3 . B YT3 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc15 H Y YT3 . B YT3 402 1_555 K O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.031 ? metalc ? metalc16 I Y YT3 . B YT3 403 1_555 K O HOH . B HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? # _chem_comp.formula 'C19 H12 Cl N3 O2' _chem_comp.formula_weight 349.77 _chem_comp.id 3NG _chem_comp.mon_nstd_flag . _chem_comp.name '5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 3NG doub 1 n y C1 N9 3NG sing 2 n y C1 C6 3NG sing 3 n y C2 C3 3NG sing 4 n y C8 C2 3NG sing 5 n y C3 C4 3NG doub 6 n y C3 H3 3NG sing 7 n n C4 C5 3NG sing 8 n y C4 H4 3NG sing 9 n n C5 C6 3NG doub 10 n y C5 C23 3NG sing 11 n n C6 H6 3NG sing 12 n n C14 C7 3NG sing 13 n y C10 C7 3NG sing 14 n y C7 C8 3NG doub 15 n y C8 C13 3NG sing 16 n y C10 N9 3NG doub 17 n y N15 C10 3NG sing 18 n n C14 C11 3NG doub 19 n y C11 N12 3NG sing 20 n y C11 H11 3NG sing 21 n n N12 C13 3NG doub 22 n y C13 H13 3NG sing 23 n n C14 H14 3NG sing 24 n n C16 N15 3NG sing 25 n n N15 HN15 3NG sing 26 n n C21 C16 3NG doub 27 n y C16 C17 3NG sing 28 n y C18 C17 3NG doub 29 n y C17 H17 3NG sing 30 n n C19 C18 3NG sing 31 n y C18 CL22 3NG sing 32 n n C20 C19 3NG doub 33 n y C19 H19 3NG sing 34 n n C20 C21 3NG sing 35 n y C20 H20 3NG sing 36 n n C21 H21 3NG sing 37 n n O24 C23 3NG doub 38 n n C23 O25 3NG sing 39 n n O25 HO25 3NG sing 40 n n # _atom_sites.entry_id 7Z1F _atom_sites.fract_transf_matrix[1][1] 0.011628 _atom_sites.fract_transf_matrix[1][2] 0.006713 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013427 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3NG A 1 401 403 3NG 3NG . D 3 IMD A 1 402 405 IMD IMD . E 4 YT3 A 1 403 410 YT3 YT3 . F 4 YT3 A 1 404 411 YT3 YT3 . G 2 3NG B 1 401 403 3NG 3NG . H 4 YT3 B 1 402 410 YT3 YT3 . I 4 YT3 B 1 403 411 YT3 YT3 . J 5 HOH A 1 501 24 HOH HOH . J 5 HOH A 2 502 23 HOH HOH . J 5 HOH A 3 503 26 HOH HOH . J 5 HOH A 4 504 13 HOH HOH . J 5 HOH A 5 505 2 HOH HOH . J 5 HOH A 6 506 46 HOH HOH . J 5 HOH A 7 507 9 HOH HOH . J 5 HOH A 8 508 33 HOH HOH . J 5 HOH A 9 509 19 HOH HOH . J 5 HOH A 10 510 17 HOH HOH . J 5 HOH A 11 511 27 HOH HOH . J 5 HOH A 12 512 28 HOH HOH . J 5 HOH A 13 513 43 HOH HOH . J 5 HOH A 14 514 11 HOH HOH . J 5 HOH A 15 515 34 HOH HOH . J 5 HOH A 16 516 12 HOH HOH . J 5 HOH A 17 517 36 HOH HOH . J 5 HOH A 18 518 37 HOH HOH . J 5 HOH A 19 519 7 HOH HOH . J 5 HOH A 20 520 39 HOH HOH . J 5 HOH A 21 521 14 HOH HOH . J 5 HOH A 22 522 51 HOH HOH . J 5 HOH A 23 523 29 HOH HOH . J 5 HOH A 24 524 18 HOH HOH . J 5 HOH A 25 525 1 HOH HOH . J 5 HOH A 26 526 38 HOH HOH . K 5 HOH B 1 501 32 HOH HOH . K 5 HOH B 2 502 5 HOH HOH . K 5 HOH B 3 503 10 HOH HOH . K 5 HOH B 4 504 15 HOH HOH . K 5 HOH B 5 505 8 HOH HOH . K 5 HOH B 6 506 30 HOH HOH . K 5 HOH B 7 507 16 HOH HOH . K 5 HOH B 8 508 22 HOH HOH . K 5 HOH B 9 509 47 HOH HOH . K 5 HOH B 10 510 21 HOH HOH . K 5 HOH B 11 511 52 HOH HOH . K 5 HOH B 12 512 4 HOH HOH . K 5 HOH B 13 513 6 HOH HOH . K 5 HOH B 14 514 25 HOH HOH . K 5 HOH B 15 515 42 HOH HOH . K 5 HOH B 16 516 41 HOH HOH . K 5 HOH B 17 517 20 HOH HOH . K 5 HOH B 18 518 48 HOH HOH . K 5 HOH B 19 519 44 HOH HOH . K 5 HOH B 20 520 40 HOH HOH . K 5 HOH B 21 521 35 HOH HOH . K 5 HOH B 22 522 31 HOH HOH . K 5 HOH B 23 523 49 HOH HOH . K 5 HOH B 24 524 53 HOH HOH . K 5 HOH B 25 525 45 HOH HOH . K 5 HOH B 26 526 3 HOH HOH . K 5 HOH B 27 527 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3NG . . . G 2 76.406 -6.792 20.405 1 100.52 ? C1 3NG 401 B 1 HETATM 2 C C2 3NG . . . G 2 77.688 -6.563 20.904 1 94.31 ? C2 3NG 401 B 1 HETATM 3 C C3 3NG . . . G 2 77.94 -6.786 22.266 1 100.38 ? C3 3NG 401 B 1 HETATM 4 C C4 3NG . . . G 2 76.921 -7.222 23.074 1 100.91 ? C4 3NG 401 B 1 HETATM 5 C C5 3NG . . . G 2 75.638 -7.448 22.554 1 95.21 ? C5 3NG 401 B 1 HETATM 6 C C6 3NG . . . G 2 75.361 -7.238 21.225 1 98.58 ? C6 3NG 401 B 1 HETATM 7 C C7 3NG . . . G 2 78.329 -5.921 18.658 1 97.29 ? C7 3NG 401 B 1 HETATM 8 C C8 3NG . . . G 2 78.682 -6.109 19.982 1 94.72 ? C8 3NG 401 B 1 HETATM 9 N N9 3NG . . . G 2 76.023 -6.612 19.073 1 93.45 ? N9 3NG 401 B 1 HETATM 10 C C10 3NG . . . G 2 76.984 -6.186 18.256 1 93.9 ? C10 3NG 401 B 1 HETATM 11 C C11 3NG . . . G 2 80.566 -5.239 18.194 1 105.71 ? C11 3NG 401 B 1 HETATM 12 N N12 3NG . . . G 2 80.939 -5.417 19.498 1 108.18 ? N12 3NG 401 B 1 HETATM 13 C C13 3NG . . . G 2 80.013 -5.839 20.357 1 100.97 ? C13 3NG 401 B 1 HETATM 14 C C14 3NG . . . G 2 79.293 -5.473 17.731 1 103.18 ? C14 3NG 401 B 1 HETATM 15 N N15 3NG . . . G 2 76.689 -5.977 16.909 1 106.08 ? N15 3NG 401 B 1 HETATM 16 C C16 3NG . . . G 2 75.48 -6.029 16.232 1 111.32 ? C16 3NG 401 B 1 HETATM 17 C C17 3NG . . . G 2 74.223 -5.903 16.855 1 108.9 ? C17 3NG 401 B 1 HETATM 18 C C18 3NG . . . G 2 73.124 -5.977 16.028 1 110.17 ? C18 3NG 401 B 1 HETATM 19 C C19 3NG . . . G 2 73.184 -6.153 14.662 1 115.51 ? C19 3NG 401 B 1 HETATM 20 C C20 3NG . . . G 2 74.435 -6.269 14.07 1 116.23 ? C20 3NG 401 B 1 HETATM 21 C C21 3NG . . . G 2 75.567 -6.206 14.845 1 112.4 ? C21 3NG 401 B 1 HETATM 22 CL CL22 3NG . . . G 2 71.575 -5.839 16.728 1 115.39 ? CL22 3NG 401 B 1 HETATM 23 C C23 3NG . . . G 2 74.481 -7.931 23.422 1 101.32 ? C23 3NG 401 B 1 HETATM 24 O O24 3NG . . . G 2 73.38 -8.026 22.822 1 99.8 ? O24 3NG 401 B 1 HETATM 25 O O25 3NG . . . G 2 74.72 -8.179 24.605 1 99.31 ? O25 3NG 401 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #