data_7Z1R
#
_model_server_result.job_id            s2Lx8u9ixIalco0Qwbiung 
_model_server_result.datetime_utc      '2024-11-08 16:11:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z1r 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
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_entry.id    7Z1R 
#
_exptl.entry_id    7Z1R 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7Z1R 
_cell.length_a            87.808 
_cell.length_b            87.808 
_cell.length_c            55.184 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 7Z1R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    'P 32 2"' 
_symmetry.space_group_name_H-M     'P 32 2 1' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
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_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 168 n n 
C1 C2 GOL sing 169 n n 
C1 H11 GOL sing 170 n n 
C1 H12 GOL sing 171 n n 
O1 HO1 GOL sing 172 n n 
C2 O2 GOL sing 173 n n 
C2 C3 GOL sing 174 n n 
C2 H2 GOL sing 175 n n 
O2 HO2 GOL sing 176 n n 
C3 O3 GOL sing 177 n n 
C3 H31 GOL sing 178 n n 
C3 H32 GOL sing 179 n n 
O3 HO3 GOL sing 180 n n 
#
_atom_sites.entry_id                     7Z1R 
_atom_sites.fract_transf_matrix[1][1]    0.011388 
_atom_sites.fract_transf_matrix[1][2]    0.006575 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01315 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018121 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A8S D000 1 301 301 A8S A8S . 
C 3 GOL D000 1 302 302 GOL GOL . 
D 3 GOL D000 1 303 303 GOL GOL . 
E 4 HOH D000 1 401 99 HOH HOH . 
E 4 HOH D000 2 402 87 HOH HOH . 
E 4 HOH D000 3 403 17 HOH HOH . 
E 4 HOH D000 4 404 98 HOH HOH . 
E 4 HOH D000 5 405 45 HOH HOH . 
E 4 HOH D000 6 406 86 HOH HOH . 
E 4 HOH D000 7 407 40 HOH HOH . 
E 4 HOH D000 8 408 50 HOH HOH . 
E 4 HOH D000 9 409 7 HOH HOH . 
E 4 HOH D000 10 410 83 HOH HOH . 
E 4 HOH D000 11 411 94 HOH HOH . 
E 4 HOH D000 12 412 14 HOH HOH . 
E 4 HOH D000 13 413 85 HOH HOH . 
E 4 HOH D000 14 414 59 HOH HOH . 
E 4 HOH D000 15 415 100 HOH HOH . 
E 4 HOH D000 16 416 78 HOH HOH . 
E 4 HOH D000 17 417 15 HOH HOH . 
E 4 HOH D000 18 418 44 HOH HOH . 
E 4 HOH D000 19 419 88 HOH HOH . 
E 4 HOH D000 20 420 82 HOH HOH . 
E 4 HOH D000 21 421 53 HOH HOH . 
E 4 HOH D000 22 422 76 HOH HOH . 
E 4 HOH D000 23 423 90 HOH HOH . 
E 4 HOH D000 24 424 35 HOH HOH . 
E 4 HOH D000 25 425 5 HOH HOH . 
E 4 HOH D000 26 426 36 HOH HOH . 
E 4 HOH D000 27 427 32 HOH HOH . 
E 4 HOH D000 28 428 74 HOH HOH . 
E 4 HOH D000 29 429 38 HOH HOH . 
E 4 HOH D000 30 430 42 HOH HOH . 
E 4 HOH D000 31 431 4 HOH HOH . 
E 4 HOH D000 32 432 37 HOH HOH . 
E 4 HOH D000 33 433 48 HOH HOH . 
E 4 HOH D000 34 434 39 HOH HOH . 
E 4 HOH D000 35 435 61 HOH HOH . 
E 4 HOH D000 36 436 29 HOH HOH . 
E 4 HOH D000 37 437 102 HOH HOH . 
E 4 HOH D000 38 438 23 HOH HOH . 
E 4 HOH D000 39 439 18 HOH HOH . 
E 4 HOH D000 40 440 31 HOH HOH . 
E 4 HOH D000 41 441 2 HOH HOH . 
E 4 HOH D000 42 442 56 HOH HOH . 
E 4 HOH D000 43 443 22 HOH HOH . 
E 4 HOH D000 44 444 21 HOH HOH . 
E 4 HOH D000 45 445 6 HOH HOH . 
E 4 HOH D000 46 446 67 HOH HOH . 
E 4 HOH D000 47 447 30 HOH HOH . 
E 4 HOH D000 48 448 26 HOH HOH . 
E 4 HOH D000 49 449 10 HOH HOH . 
E 4 HOH D000 50 450 19 HOH HOH . 
E 4 HOH D000 51 451 1 HOH HOH . 
E 4 HOH D000 52 452 51 HOH HOH . 
E 4 HOH D000 53 453 27 HOH HOH . 
E 4 HOH D000 54 454 80 HOH HOH . 
E 4 HOH D000 55 455 12 HOH HOH . 
E 4 HOH D000 56 456 25 HOH HOH . 
E 4 HOH D000 57 457 43 HOH HOH . 
E 4 HOH D000 58 458 9 HOH HOH . 
E 4 HOH D000 59 459 52 HOH HOH . 
E 4 HOH D000 60 460 13 HOH HOH . 
E 4 HOH D000 61 461 92 HOH HOH . 
E 4 HOH D000 62 462 65 HOH HOH . 
E 4 HOH D000 63 463 41 HOH HOH . 
E 4 HOH D000 64 464 11 HOH HOH . 
E 4 HOH D000 65 465 103 HOH HOH . 
E 4 HOH D000 66 466 55 HOH HOH . 
E 4 HOH D000 67 467 47 HOH HOH . 
E 4 HOH D000 68 468 28 HOH HOH . 
E 4 HOH D000 69 469 3 HOH HOH . 
E 4 HOH D000 70 470 34 HOH HOH . 
E 4 HOH D000 71 471 62 HOH HOH . 
E 4 HOH D000 72 472 84 HOH HOH . 
E 4 HOH D000 73 473 73 HOH HOH . 
E 4 HOH D000 74 474 79 HOH HOH . 
E 4 HOH D000 75 475 16 HOH HOH . 
E 4 HOH D000 76 476 89 HOH HOH . 
E 4 HOH D000 77 477 54 HOH HOH . 
E 4 HOH D000 78 478 8 HOH HOH . 
E 4 HOH D000 79 479 33 HOH HOH . 
E 4 HOH D000 80 480 60 HOH HOH . 
E 4 HOH D000 81 481 46 HOH HOH . 
E 4 HOH D000 82 482 24 HOH HOH . 
E 4 HOH D000 83 483 58 HOH HOH . 
E 4 HOH D000 84 484 77 HOH HOH . 
E 4 HOH D000 85 485 75 HOH HOH . 
E 4 HOH D000 86 486 97 HOH HOH . 
E 4 HOH D000 87 487 93 HOH HOH . 
E 4 HOH D000 88 488 68 HOH HOH . 
E 4 HOH D000 89 489 66 HOH HOH . 
E 4 HOH D000 90 490 95 HOH HOH . 
E 4 HOH D000 91 491 64 HOH HOH . 
E 4 HOH D000 92 492 81 HOH HOH . 
E 4 HOH D000 93 493 49 HOH HOH . 
E 4 HOH D000 94 494 72 HOH HOH . 
E 4 HOH D000 95 495 101 HOH HOH . 
E 4 HOH D000 96 496 63 HOH HOH . 
E 4 HOH D000 97 497 20 HOH HOH . 
E 4 HOH D000 98 498 96 HOH HOH . 
E 4 HOH D000 99 499 57 HOH HOH . 
E 4 HOH D000 100 500 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 1.524 52.448 0.973 1 53.56 ? C1 GOL 303 D000 1 
HETATM 2 O O1 GOL . . . D 3 2.717 52.089 1.591 1 53.7 ? O1 GOL 303 D000 1 
HETATM 3 C C2 GOL . . . D 3 1.427 51.633 -0.395 1 53.05 ? C2 GOL 303 D000 1 
HETATM 4 O O2 GOL . . . D 3 2.603 51.021 -0.797 1 44.43 ? O2 GOL 303 D000 1 
HETATM 5 C C3 GOL . . . D 3 0.319 50.587 -0.093 1 49.57 ? C3 GOL 303 D000 1 
HETATM 6 O O3 GOL . . . D 3 0.272 49.665 -1.14 1 49.82 ? O3 GOL 303 D000 1 
HETATM 7 H H11 GOL . . . D 3 1.476 53.398 0.782 1 64.27 ? H11 GOL 303 D000 1 
HETATM 8 H H12 GOL . . . D 3 0.748 52.247 1.519 1 64.27 ? H12 GOL 303 D000 1 
HETATM 9 H HO1 GOL . . . D 3 2.622 51.289 1.876 1 64.44 ? HO1 GOL 303 D000 1 
HETATM 10 H H2 GOL . . . D 3 1.215 52.237 -1.124 1 63.66 ? H2 GOL 303 D000 1 
HETATM 11 H HO2 GOL . . . D 3 3.236 51.395 -0.376 1 53.32 ? HO2 GOL 303 D000 1 
HETATM 12 H H31 GOL . . . D 3 -0.519 51.059 0.033 1 59.48 ? H31 GOL 303 D000 1 
HETATM 13 H H32 GOL . . . D 3 0.514 50.177 0.764 1 59.48 ? H32 GOL 303 D000 1 
HETATM 14 H HO3 GOL . . . D 3 1.005 49.236 -1.153 1 59.78 ? HO3 GOL 303 D000 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           216 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           14 
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