data_7Z1U
#
_model_server_result.job_id            nF-pZ5_XC-5WiBMTztLMbA 
_model_server_result.datetime_utc      '2024-11-15 08:56:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z1u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    7Z1U 
#
_exptl.entry_id    7Z1U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.05 
_cell.angle_gamma         90 
_cell.entry_id            7Z1U 
_cell.length_a            36.85 
_cell.length_b            73.92 
_cell.length_c            62.83 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z1U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 77 A HIS 69 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc2 A NE2 HIS 112 A HIS 104 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc3 B NE2 HIS 77 B HIS 69 1_555 D FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? 
metalc ? metalc4 B NE2 HIS 112 B HIS 104 1_555 D FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     7Z1U 
_atom_sites.fract_transf_matrix[1][1]    0.027137 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007297 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013528 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016481 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 201 1163 HEM HEM . 
D 2 HEM B 1 201 1163 HEM HEM . 
E 3 HOH A 1 301 7 HOH HOH . 
E 3 HOH A 2 302 8 HOH HOH . 
E 3 HOH A 3 303 9 HOH HOH . 
E 3 HOH A 4 304 1 HOH HOH . 
E 3 HOH A 5 305 6 HOH HOH . 
E 3 HOH A 6 306 11 HOH HOH . 
F 3 HOH B 1 301 2 HOH HOH . 
F 3 HOH B 2 302 3 HOH HOH . 
F 3 HOH B 3 303 4 HOH HOH . 
F 3 HOH B 4 304 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . D 2 -2.351 -28.189 -6.868 1 72.43 ? CHA HEM 201 B 1 
HETATM 2 C CHB HEM . . . D 2 -0.921 -24.963 -10.209 1 75.66 ? CHB HEM 201 B 1 
HETATM 3 C CHC HEM . . . D 2 2.898 -23.912 -7.406 1 47.61 ? CHC HEM 201 B 1 
HETATM 4 C CHD HEM . . . D 2 0.687 -26.111 -3.687 1 65.89 ? CHD HEM 201 B 1 
HETATM 5 C C1A HEM . . . D 2 -2.31 -27.435 -8.025 1 67.6 ? C1A HEM 201 B 1 
HETATM 6 C C2A HEM . . . D 2 -3.243 -27.474 -9.139 1 76.78 ? C2A HEM 201 B 1 
HETATM 7 C C3A HEM . . . D 2 -2.844 -26.585 -10.052 1 72.47 ? C3A HEM 201 B 1 
HETATM 8 C C4A HEM . . . D 2 -1.644 -25.942 -9.561 1 74.55 ? C4A HEM 201 B 1 
HETATM 9 C CMA HEM . . . D 2 -3.54 -26.292 -11.401 1 59.91 ? CMA HEM 201 B 1 
HETATM 10 C CAA HEM . . . D 2 -4.489 -28.373 -9.278 1 86.6 ? CAA HEM 201 B 1 
HETATM 11 C CBA HEM . . . D 2 -5.595 -27.873 -8.356 1 93.8 ? CBA HEM 201 B 1 
HETATM 12 C CGA HEM . . . D 2 -6.76 -28.816 -8.475 1 101.46 ? CGA HEM 201 B 1 
HETATM 13 O O1A HEM . . . D 2 -7.561 -28.909 -7.511 1 104 ? O1A HEM 201 B 1 
HETATM 14 O O2A HEM . . . D 2 -6.883 -29.478 -9.538 1 102.85 ? O2A HEM 201 B 1 
HETATM 15 C C1B HEM . . . D 2 0.248 -24.39 -9.755 1 60.56 ? C1B HEM 201 B 1 
HETATM 16 C C2B HEM . . . D 2 1.039 -23.392 -10.445 1 64.8 ? C2B HEM 201 B 1 
HETATM 17 C C3B HEM . . . D 2 2.095 -23.093 -9.686 1 57.16 ? C3B HEM 201 B 1 
HETATM 18 C C4B HEM . . . D 2 2.017 -23.896 -8.471 1 39.31 ? C4B HEM 201 B 1 
HETATM 19 C CMB HEM . . . D 2 0.72 -22.777 -11.824 1 55.32 ? CMB HEM 201 B 1 
HETATM 20 C CAB HEM . . . D 2 3.18 -22.064 -10.081 1 70.33 ? CAB HEM 201 B 1 
HETATM 21 C CBB HEM . . . D 2 4.226 -21.81 -9.291 1 79.41 ? CBB HEM 201 B 1 
HETATM 22 C C1C HEM . . . D 2 2.635 -24.388 -6.141 1 62.78 ? C1C HEM 201 B 1 
HETATM 23 C C2C HEM . . . D 2 3.47 -24.224 -4.968 1 61.91 ? C2C HEM 201 B 1 
HETATM 24 C C3C HEM . . . D 2 2.855 -24.825 -3.944 1 68.59 ? C3C HEM 201 B 1 
HETATM 25 C C4C HEM . . . D 2 1.613 -25.4 -4.424 1 68.3 ? C4C HEM 201 B 1 
HETATM 26 C CMC HEM . . . D 2 4.823 -23.477 -4.919 1 55.74 ? CMC HEM 201 B 1 
HETATM 27 C CAC HEM . . . D 2 3.371 -24.914 -2.493 1 82.91 ? CAC HEM 201 B 1 
HETATM 28 C CBC HEM . . . D 2 4.469 -25.624 -2.217 1 91.69 ? CBC HEM 201 B 1 
HETATM 29 C C1D HEM . . . D 2 -0.275 -26.949 -4.22 1 60.02 ? C1D HEM 201 B 1 
HETATM 30 C C2D HEM . . . D 2 -0.996 -28.003 -3.532 1 69.12 ? C2D HEM 201 B 1 
HETATM 31 C C3D HEM . . . D 2 -1.839 -28.575 -4.398 1 79.16 ? C3D HEM 201 B 1 
HETATM 32 C C4D HEM . . . D 2 -1.681 -27.915 -5.686 1 72.52 ? C4D HEM 201 B 1 
HETATM 33 C CMD HEM . . . D 2 -0.837 -28.396 -2.048 1 70.71 ? CMD HEM 201 B 1 
HETATM 34 C CAD HEM . . . D 2 -2.787 -29.751 -4.057 1 87.98 ? CAD HEM 201 B 1 
HETATM 35 C CBD HEM . . . D 2 -4.223 -29.465 -4.488 1 99.95 ? CBD HEM 201 B 1 
HETATM 36 C CGD HEM . . . D 2 -5.06 -30.695 -4.265 1 110.65 ? CGD HEM 201 B 1 
HETATM 37 O O1D HEM . . . D 2 -4.526 -31.681 -3.697 1 114.94 ? O1D HEM 201 B 1 
HETATM 38 O O2D HEM . . . D 2 -6.257 -30.693 -4.651 1 115.22 ? O2D HEM 201 B 1 
HETATM 39 N NA HEM . . . D 2 -1.35 -26.486 -8.324 1 69.22 ? NA HEM 201 B 1 
HETATM 40 N NB HEM . . . D 2 0.876 -24.671 -8.556 1 63.55 ? NB HEM 201 B 1 
HETATM 41 N NC HEM . . . D 2 1.515 -25.11 -5.771 1 46.56 ? NC HEM 201 B 1 
HETATM 42 N ND HEM . . . D 2 -0.721 -26.93 -5.529 1 71.23 ? ND HEM 201 B 1 
HETATM 43 FE FE HEM . . . D 2 0.111 -25.843 -7.054 1 55.94 ? FE HEM 201 B 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#