data_7Z1V # _model_server_result.job_id IBLybTAWnA6oDpqZ6xKI9g _model_server_result.datetime_utc '2024-11-05 06:38:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 7Z1V # _exptl.entry_id 7Z1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z1V _cell.length_a 45.14 _cell.length_b 68.38 _cell.length_c 159.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7Z1V _atom_sites.fract_transf_matrix[1][1] 0.022153 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IAW A 1 701 701 IAW DRG . D 3 DMS B 1 701 701 DMS DMS . E 4 HOH A 1 801 312 HOH HOH . E 4 HOH A 2 802 164 HOH HOH . E 4 HOH A 3 803 315 HOH HOH . E 4 HOH A 4 804 310 HOH HOH . E 4 HOH A 5 805 259 HOH HOH . E 4 HOH A 6 806 80 HOH HOH . E 4 HOH A 7 807 225 HOH HOH . E 4 HOH A 8 808 120 HOH HOH . E 4 HOH A 9 809 261 HOH HOH . E 4 HOH A 10 810 110 HOH HOH . E 4 HOH A 11 811 183 HOH HOH . E 4 HOH A 12 812 237 HOH HOH . E 4 HOH A 13 813 134 HOH HOH . E 4 HOH A 14 814 181 HOH HOH . E 4 HOH A 15 815 87 HOH HOH . E 4 HOH A 16 816 28 HOH HOH . E 4 HOH A 17 817 236 HOH HOH . E 4 HOH A 18 818 57 HOH HOH . E 4 HOH A 19 819 160 HOH HOH . E 4 HOH A 20 820 97 HOH HOH . E 4 HOH A 21 821 123 HOH HOH . E 4 HOH A 22 822 162 HOH HOH . E 4 HOH A 23 823 23 HOH HOH . E 4 HOH A 24 824 148 HOH HOH . E 4 HOH A 25 825 151 HOH HOH . E 4 HOH A 26 826 90 HOH HOH . E 4 HOH A 27 827 36 HOH HOH . E 4 HOH A 28 828 119 HOH HOH . E 4 HOH A 29 829 172 HOH HOH . E 4 HOH A 30 830 245 HOH HOH . E 4 HOH A 31 831 238 HOH HOH . E 4 HOH A 32 832 124 HOH HOH . E 4 HOH A 33 833 171 HOH HOH . E 4 HOH A 34 834 105 HOH HOH . E 4 HOH A 35 835 143 HOH HOH . E 4 HOH A 36 836 117 HOH HOH . E 4 HOH A 37 837 15 HOH HOH . E 4 HOH A 38 838 26 HOH HOH . E 4 HOH A 39 839 132 HOH HOH . E 4 HOH A 40 840 155 HOH HOH . E 4 HOH A 41 841 289 HOH HOH . E 4 HOH A 42 842 32 HOH HOH . E 4 HOH A 43 843 144 HOH HOH . E 4 HOH A 44 844 99 HOH HOH . E 4 HOH A 45 845 82 HOH HOH . E 4 HOH A 46 846 221 HOH HOH . E 4 HOH A 47 847 29 HOH HOH . E 4 HOH A 48 848 239 HOH HOH . E 4 HOH A 49 849 109 HOH HOH . E 4 HOH A 50 850 153 HOH HOH . E 4 HOH A 51 851 78 HOH HOH . E 4 HOH A 52 852 311 HOH HOH . E 4 HOH A 53 853 262 HOH HOH . E 4 HOH A 54 854 20 HOH HOH . E 4 HOH A 55 855 298 HOH HOH . E 4 HOH A 56 856 68 HOH HOH . E 4 HOH A 57 857 61 HOH HOH . E 4 HOH A 58 858 275 HOH HOH . E 4 HOH A 59 859 73 HOH HOH . E 4 HOH A 60 860 81 HOH HOH . E 4 HOH A 61 861 91 HOH HOH . E 4 HOH A 62 862 250 HOH HOH . E 4 HOH A 63 863 74 HOH HOH . E 4 HOH A 64 864 22 HOH HOH . E 4 HOH A 65 865 88 HOH HOH . E 4 HOH A 66 866 121 HOH HOH . E 4 HOH A 67 867 292 HOH HOH . E 4 HOH A 68 868 297 HOH HOH . E 4 HOH A 69 869 95 HOH HOH . E 4 HOH A 70 870 85 HOH HOH . E 4 HOH A 71 871 175 HOH HOH . E 4 HOH A 72 872 249 HOH HOH . E 4 HOH A 73 873 37 HOH HOH . E 4 HOH A 74 874 197 HOH HOH . E 4 HOH A 75 875 186 HOH HOH . E 4 HOH A 76 876 72 HOH HOH . E 4 HOH A 77 877 224 HOH HOH . E 4 HOH A 78 878 104 HOH HOH . E 4 HOH A 79 879 17 HOH HOH . E 4 HOH A 80 880 212 HOH HOH . E 4 HOH A 81 881 75 HOH HOH . E 4 HOH A 82 882 198 HOH HOH . E 4 HOH A 83 883 176 HOH HOH . E 4 HOH A 84 884 284 HOH HOH . E 4 HOH A 85 885 208 HOH HOH . E 4 HOH A 86 886 187 HOH HOH . E 4 HOH A 87 887 49 HOH HOH . E 4 HOH A 88 888 282 HOH HOH . E 4 HOH A 89 889 268 HOH HOH . E 4 HOH A 90 890 266 HOH HOH . E 4 HOH A 91 891 128 HOH HOH . E 4 HOH A 92 892 211 HOH HOH . E 4 HOH A 93 893 63 HOH HOH . E 4 HOH A 94 894 89 HOH HOH . E 4 HOH A 95 895 136 HOH HOH . E 4 HOH A 96 896 59 HOH HOH . E 4 HOH A 97 897 116 HOH HOH . E 4 HOH A 98 898 102 HOH HOH . E 4 HOH A 99 899 286 HOH HOH . E 4 HOH A 100 900 257 HOH HOH . E 4 HOH A 101 901 65 HOH HOH . E 4 HOH A 102 902 260 HOH HOH . E 4 HOH A 103 903 11 HOH HOH . E 4 HOH A 104 904 141 HOH HOH . E 4 HOH A 105 905 182 HOH HOH . E 4 HOH A 106 906 45 HOH HOH . E 4 HOH A 107 907 291 HOH HOH . E 4 HOH A 108 908 64 HOH HOH . E 4 HOH A 109 909 125 HOH HOH . E 4 HOH A 110 910 152 HOH HOH . E 4 HOH A 111 911 290 HOH HOH . E 4 HOH A 112 912 5 HOH HOH . E 4 HOH A 113 913 19 HOH HOH . E 4 HOH A 114 914 280 HOH HOH . E 4 HOH A 115 915 70 HOH HOH . E 4 HOH A 116 916 84 HOH HOH . E 4 HOH A 117 917 130 HOH HOH . E 4 HOH A 118 918 252 HOH HOH . E 4 HOH A 119 919 92 HOH HOH . E 4 HOH A 120 920 161 HOH HOH . E 4 HOH A 121 921 295 HOH HOH . E 4 HOH A 122 922 194 HOH HOH . E 4 HOH A 123 923 111 HOH HOH . E 4 HOH A 124 924 191 HOH HOH . E 4 HOH A 125 925 227 HOH HOH . E 4 HOH A 126 926 214 HOH HOH . E 4 HOH A 127 927 169 HOH HOH . E 4 HOH A 128 928 173 HOH HOH . E 4 HOH A 129 929 248 HOH HOH . E 4 HOH A 130 930 230 HOH HOH . E 4 HOH A 131 931 254 HOH HOH . E 4 HOH A 132 932 216 HOH HOH . E 4 HOH A 133 933 294 HOH HOH . E 4 HOH A 134 934 69 HOH HOH . E 4 HOH A 135 935 300 HOH HOH . E 4 HOH A 136 936 269 HOH HOH . E 4 HOH A 137 937 304 HOH HOH . E 4 HOH A 138 938 240 HOH HOH . F 4 HOH B 1 801 178 HOH HOH . F 4 HOH B 2 802 270 HOH HOH . F 4 HOH B 3 803 113 HOH HOH . F 4 HOH B 4 804 308 HOH HOH . F 4 HOH B 5 805 168 HOH HOH . F 4 HOH B 6 806 139 HOH HOH . F 4 HOH B 7 807 220 HOH HOH . F 4 HOH B 8 808 281 HOH HOH . F 4 HOH B 9 809 7 HOH HOH . F 4 HOH B 10 810 146 HOH HOH . F 4 HOH B 11 811 150 HOH HOH . F 4 HOH B 12 812 77 HOH HOH . F 4 HOH B 13 813 265 HOH HOH . F 4 HOH B 14 814 318 HOH HOH . F 4 HOH B 15 815 106 HOH HOH . F 4 HOH B 16 816 147 HOH HOH . F 4 HOH B 17 817 321 HOH HOH . F 4 HOH B 18 818 272 HOH HOH . F 4 HOH B 19 819 206 HOH HOH . F 4 HOH B 20 820 234 HOH HOH . F 4 HOH B 21 821 253 HOH HOH . F 4 HOH B 22 822 114 HOH HOH . F 4 HOH B 23 823 47 HOH HOH . F 4 HOH B 24 824 217 HOH HOH . F 4 HOH B 25 825 215 HOH HOH . F 4 HOH B 26 826 154 HOH HOH . F 4 HOH B 27 827 288 HOH HOH . F 4 HOH B 28 828 251 HOH HOH . F 4 HOH B 29 829 86 HOH HOH . F 4 HOH B 30 830 184 HOH HOH . F 4 HOH B 31 831 10 HOH HOH . F 4 HOH B 32 832 133 HOH HOH . F 4 HOH B 33 833 129 HOH HOH . F 4 HOH B 34 834 103 HOH HOH . F 4 HOH B 35 835 170 HOH HOH . F 4 HOH B 36 836 96 HOH HOH . F 4 HOH B 37 837 140 HOH HOH . F 4 HOH B 38 838 244 HOH HOH . F 4 HOH B 39 839 309 HOH HOH . F 4 HOH B 40 840 231 HOH HOH . F 4 HOH B 41 841 27 HOH HOH . F 4 HOH B 42 842 56 HOH HOH . F 4 HOH B 43 843 158 HOH HOH . F 4 HOH B 44 844 31 HOH HOH . F 4 HOH B 45 845 25 HOH HOH . F 4 HOH B 46 846 12 HOH HOH . F 4 HOH B 47 847 14 HOH HOH . F 4 HOH B 48 848 62 HOH HOH . F 4 HOH B 49 849 54 HOH HOH . F 4 HOH B 50 850 263 HOH HOH . F 4 HOH B 51 851 21 HOH HOH . F 4 HOH B 52 852 16 HOH HOH . F 4 HOH B 53 853 196 HOH HOH . F 4 HOH B 54 854 83 HOH HOH . F 4 HOH B 55 855 165 HOH HOH . F 4 HOH B 56 856 6 HOH HOH . F 4 HOH B 57 857 218 HOH HOH . F 4 HOH B 58 858 200 HOH HOH . F 4 HOH B 59 859 223 HOH HOH . F 4 HOH B 60 860 287 HOH HOH . F 4 HOH B 61 861 299 HOH HOH . F 4 HOH B 62 862 279 HOH HOH . F 4 HOH B 63 863 107 HOH HOH . F 4 HOH B 64 864 30 HOH HOH . F 4 HOH B 65 865 193 HOH HOH . F 4 HOH B 66 866 174 HOH HOH . F 4 HOH B 67 867 42 HOH HOH . F 4 HOH B 68 868 179 HOH HOH . F 4 HOH B 69 869 277 HOH HOH . F 4 HOH B 70 870 219 HOH HOH . F 4 HOH B 71 871 101 HOH HOH . F 4 HOH B 72 872 213 HOH HOH . F 4 HOH B 73 873 232 HOH HOH . F 4 HOH B 74 874 34 HOH HOH . F 4 HOH B 75 875 222 HOH HOH . F 4 HOH B 76 876 149 HOH HOH . F 4 HOH B 77 877 112 HOH HOH . F 4 HOH B 78 878 228 HOH HOH . F 4 HOH B 79 879 24 HOH HOH . F 4 HOH B 80 880 209 HOH HOH . F 4 HOH B 81 881 122 HOH HOH . F 4 HOH B 82 882 319 HOH HOH . F 4 HOH B 83 883 283 HOH HOH . F 4 HOH B 84 884 207 HOH HOH . F 4 HOH B 85 885 138 HOH HOH . F 4 HOH B 86 886 163 HOH HOH . F 4 HOH B 87 887 317 HOH HOH . F 4 HOH B 88 888 189 HOH HOH . F 4 HOH B 89 889 33 HOH HOH . F 4 HOH B 90 890 35 HOH HOH . F 4 HOH B 91 891 264 HOH HOH . F 4 HOH B 92 892 44 HOH HOH . F 4 HOH B 93 893 167 HOH HOH . F 4 HOH B 94 894 246 HOH HOH . F 4 HOH B 95 895 9 HOH HOH . F 4 HOH B 96 896 55 HOH HOH . F 4 HOH B 97 897 195 HOH HOH . F 4 HOH B 98 898 39 HOH HOH . F 4 HOH B 99 899 273 HOH HOH . F 4 HOH B 100 900 100 HOH HOH . F 4 HOH B 101 901 98 HOH HOH . F 4 HOH B 102 902 8 HOH HOH . F 4 HOH B 103 903 79 HOH HOH . F 4 HOH B 104 904 316 HOH HOH . F 4 HOH B 105 905 185 HOH HOH . F 4 HOH B 106 906 199 HOH HOH . F 4 HOH B 107 907 205 HOH HOH . F 4 HOH B 108 908 142 HOH HOH . F 4 HOH B 109 909 18 HOH HOH . F 4 HOH B 110 910 135 HOH HOH . F 4 HOH B 111 911 93 HOH HOH . F 4 HOH B 112 912 320 HOH HOH . F 4 HOH B 113 913 76 HOH HOH . F 4 HOH B 114 914 233 HOH HOH . F 4 HOH B 115 915 145 HOH HOH . F 4 HOH B 116 916 274 HOH HOH . F 4 HOH B 117 917 41 HOH HOH . F 4 HOH B 118 918 159 HOH HOH . F 4 HOH B 119 919 51 HOH HOH . F 4 HOH B 120 920 60 HOH HOH . F 4 HOH B 121 921 313 HOH HOH . F 4 HOH B 122 922 40 HOH HOH . F 4 HOH B 123 923 301 HOH HOH . F 4 HOH B 124 924 71 HOH HOH . F 4 HOH B 125 925 156 HOH HOH . F 4 HOH B 126 926 256 HOH HOH . F 4 HOH B 127 927 306 HOH HOH . F 4 HOH B 128 928 43 HOH HOH . F 4 HOH B 129 929 137 HOH HOH . F 4 HOH B 130 930 48 HOH HOH . F 4 HOH B 131 931 38 HOH HOH . F 4 HOH B 132 932 127 HOH HOH . F 4 HOH B 133 933 201 HOH HOH . F 4 HOH B 134 934 177 HOH HOH . F 4 HOH B 135 935 67 HOH HOH . F 4 HOH B 136 936 314 HOH HOH . F 4 HOH B 137 937 322 HOH HOH . F 4 HOH B 138 938 4 HOH HOH . F 4 HOH B 139 939 131 HOH HOH . F 4 HOH B 140 940 118 HOH HOH . F 4 HOH B 141 941 58 HOH HOH . F 4 HOH B 142 942 46 HOH HOH . F 4 HOH B 143 943 235 HOH HOH . F 4 HOH B 144 944 50 HOH HOH . F 4 HOH B 145 945 108 HOH HOH . F 4 HOH B 146 946 166 HOH HOH . F 4 HOH B 147 947 285 HOH HOH . F 4 HOH B 148 948 53 HOH HOH . F 4 HOH B 149 949 13 HOH HOH . F 4 HOH B 150 950 52 HOH HOH . F 4 HOH B 151 951 190 HOH HOH . F 4 HOH B 152 952 276 HOH HOH . F 4 HOH B 153 953 2 HOH HOH . F 4 HOH B 154 954 296 HOH HOH . F 4 HOH B 155 955 3 HOH HOH . F 4 HOH B 156 956 157 HOH HOH . F 4 HOH B 157 957 307 HOH HOH . F 4 HOH B 158 958 115 HOH HOH . F 4 HOH B 159 959 210 HOH HOH . F 4 HOH B 160 960 303 HOH HOH . F 4 HOH B 161 961 226 HOH HOH . F 4 HOH B 162 962 258 HOH HOH . F 4 HOH B 163 963 180 HOH HOH . F 4 HOH B 164 964 278 HOH HOH . F 4 HOH B 165 965 271 HOH HOH . F 4 HOH B 166 966 202 HOH HOH . F 4 HOH B 167 967 126 HOH HOH . F 4 HOH B 168 968 293 HOH HOH . F 4 HOH B 169 969 203 HOH HOH . F 4 HOH B 170 970 267 HOH HOH . F 4 HOH B 171 971 241 HOH HOH . F 4 HOH B 172 972 192 HOH HOH . F 4 HOH B 173 973 302 HOH HOH . F 4 HOH B 174 974 243 HOH HOH . F 4 HOH B 175 975 305 HOH HOH . F 4 HOH B 176 976 188 HOH HOH . F 4 HOH B 177 977 204 HOH HOH . F 4 HOH B 178 978 66 HOH HOH . F 4 HOH B 179 979 247 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . A . D 3 2.743 -0.245 -38.668 0.5 20.13 ? S DMS 701 B 1 HETATM 2 S S DMS . B . D 3 3.839 -0.004 -38.57 0.5 22.11 ? S DMS 701 B 1 HETATM 3 O O DMS . A . D 3 2.955 1.222 -38.834 0.5 16.86 ? O DMS 701 B 1 HETATM 4 O O DMS . B . D 3 3.295 1.25 -39.19 0.5 17.66 ? O DMS 701 B 1 HETATM 5 C C1 DMS . A . D 3 3.208 -0.597 -36.994 0.5 19.49 ? C1 DMS 701 B 1 HETATM 6 C C1 DMS . B . D 3 3.123 -1.348 -39.479 0.5 19.32 ? C1 DMS 701 B 1 HETATM 7 C C2 DMS . A . D 3 4.129 -1.002 -39.477 0.5 16.74 ? C2 DMS 701 B 1 HETATM 8 C C2 DMS . B . D 3 2.914 -0.222 -37.07 0.5 18.51 ? C2 DMS 701 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #