data_7Z1Y # _model_server_result.job_id DnZI5rzzNdx_PXgevAhskg _model_server_result.datetime_utc '2024-11-12 21:11:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 7Z1Y # _exptl.entry_id 7Z1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z1Y _cell.length_a 45.23 _cell.length_b 68.33 _cell.length_c 158.65 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7Z1Y _atom_sites.fract_transf_matrix[1][1] 0.022109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006303 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 I5F A 1 701 701 I5F DRG . D 3 DMS B 1 701 701 DMS DMS . E 4 HOH A 1 801 109 HOH HOH . E 4 HOH A 2 802 77 HOH HOH . E 4 HOH A 3 803 102 HOH HOH . E 4 HOH A 4 804 76 HOH HOH . E 4 HOH A 5 805 89 HOH HOH . E 4 HOH A 6 806 43 HOH HOH . E 4 HOH A 7 807 19 HOH HOH . E 4 HOH A 8 808 107 HOH HOH . E 4 HOH A 9 809 51 HOH HOH . E 4 HOH A 10 810 28 HOH HOH . E 4 HOH A 11 811 13 HOH HOH . E 4 HOH A 12 812 21 HOH HOH . E 4 HOH A 13 813 106 HOH HOH . E 4 HOH A 14 814 82 HOH HOH . E 4 HOH A 15 815 92 HOH HOH . E 4 HOH A 16 816 34 HOH HOH . E 4 HOH A 17 817 56 HOH HOH . E 4 HOH A 18 818 95 HOH HOH . E 4 HOH A 19 819 111 HOH HOH . E 4 HOH A 20 820 25 HOH HOH . E 4 HOH A 21 821 14 HOH HOH . E 4 HOH A 22 822 72 HOH HOH . E 4 HOH A 23 823 44 HOH HOH . E 4 HOH A 24 824 63 HOH HOH . E 4 HOH A 25 825 97 HOH HOH . E 4 HOH A 26 826 93 HOH HOH . E 4 HOH A 27 827 64 HOH HOH . E 4 HOH A 28 828 27 HOH HOH . E 4 HOH A 29 829 91 HOH HOH . E 4 HOH A 30 830 60 HOH HOH . E 4 HOH A 31 831 29 HOH HOH . E 4 HOH A 32 832 32 HOH HOH . E 4 HOH A 33 833 11 HOH HOH . E 4 HOH A 34 834 67 HOH HOH . E 4 HOH A 35 835 80 HOH HOH . E 4 HOH A 36 836 57 HOH HOH . E 4 HOH A 37 837 100 HOH HOH . E 4 HOH A 38 838 110 HOH HOH . E 4 HOH A 39 839 74 HOH HOH . E 4 HOH A 40 840 2 HOH HOH . E 4 HOH A 41 841 35 HOH HOH . E 4 HOH A 42 842 33 HOH HOH . E 4 HOH A 43 843 96 HOH HOH . E 4 HOH A 44 844 58 HOH HOH . E 4 HOH A 45 845 47 HOH HOH . E 4 HOH A 46 846 45 HOH HOH . E 4 HOH A 47 847 90 HOH HOH . E 4 HOH A 48 848 116 HOH HOH . E 4 HOH A 49 849 54 HOH HOH . E 4 HOH A 50 850 113 HOH HOH . E 4 HOH A 51 851 75 HOH HOH . F 4 HOH B 1 801 121 HOH HOH . F 4 HOH B 2 802 84 HOH HOH . F 4 HOH B 3 803 118 HOH HOH . F 4 HOH B 4 804 68 HOH HOH . F 4 HOH B 5 805 70 HOH HOH . F 4 HOH B 6 806 78 HOH HOH . F 4 HOH B 7 807 6 HOH HOH . F 4 HOH B 8 808 39 HOH HOH . F 4 HOH B 9 809 17 HOH HOH . F 4 HOH B 10 810 10 HOH HOH . F 4 HOH B 11 811 50 HOH HOH . F 4 HOH B 12 812 99 HOH HOH . F 4 HOH B 13 813 9 HOH HOH . F 4 HOH B 14 814 40 HOH HOH . F 4 HOH B 15 815 22 HOH HOH . F 4 HOH B 16 816 73 HOH HOH . F 4 HOH B 17 817 7 HOH HOH . F 4 HOH B 18 818 101 HOH HOH . F 4 HOH B 19 819 81 HOH HOH . F 4 HOH B 20 820 48 HOH HOH . F 4 HOH B 21 821 36 HOH HOH . F 4 HOH B 22 822 49 HOH HOH . F 4 HOH B 23 823 20 HOH HOH . F 4 HOH B 24 824 98 HOH HOH . F 4 HOH B 25 825 42 HOH HOH . F 4 HOH B 26 826 26 HOH HOH . F 4 HOH B 27 827 59 HOH HOH . F 4 HOH B 28 828 5 HOH HOH . F 4 HOH B 29 829 61 HOH HOH . F 4 HOH B 30 830 62 HOH HOH . F 4 HOH B 31 831 71 HOH HOH . F 4 HOH B 32 832 4 HOH HOH . F 4 HOH B 33 833 12 HOH HOH . F 4 HOH B 34 834 94 HOH HOH . F 4 HOH B 35 835 8 HOH HOH . F 4 HOH B 36 836 52 HOH HOH . F 4 HOH B 37 837 87 HOH HOH . F 4 HOH B 38 838 53 HOH HOH . F 4 HOH B 39 839 18 HOH HOH . F 4 HOH B 40 840 69 HOH HOH . F 4 HOH B 41 841 38 HOH HOH . F 4 HOH B 42 842 41 HOH HOH . F 4 HOH B 43 843 46 HOH HOH . F 4 HOH B 44 844 15 HOH HOH . F 4 HOH B 45 845 103 HOH HOH . F 4 HOH B 46 846 66 HOH HOH . F 4 HOH B 47 847 55 HOH HOH . F 4 HOH B 48 848 23 HOH HOH . F 4 HOH B 49 849 37 HOH HOH . F 4 HOH B 50 850 79 HOH HOH . F 4 HOH B 51 851 83 HOH HOH . F 4 HOH B 52 852 31 HOH HOH . F 4 HOH B 53 853 30 HOH HOH . F 4 HOH B 54 854 24 HOH HOH . F 4 HOH B 55 855 104 HOH HOH . F 4 HOH B 56 856 112 HOH HOH . F 4 HOH B 57 857 3 HOH HOH . F 4 HOH B 58 858 86 HOH HOH . F 4 HOH B 59 859 16 HOH HOH . F 4 HOH B 60 860 1 HOH HOH . F 4 HOH B 61 861 105 HOH HOH . F 4 HOH B 62 862 117 HOH HOH . F 4 HOH B 63 863 119 HOH HOH . F 4 HOH B 64 864 85 HOH HOH . F 4 HOH B 65 865 115 HOH HOH . F 4 HOH B 66 866 88 HOH HOH . F 4 HOH B 67 867 120 HOH HOH . F 4 HOH B 68 868 65 HOH HOH . F 4 HOH B 69 869 108 HOH HOH . F 4 HOH B 70 870 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 -3.526 0.533 38.45 1 37.52 ? S DMS 701 B 1 HETATM 2 O O DMS . . . D 3 -3.036 1.92 38.698 1 32.76 ? O DMS 701 B 1 HETATM 3 C C1 DMS . . . D 3 -2.724 -0.531 39.601 1 39.44 ? C1 DMS 701 B 1 HETATM 4 C C2 DMS . . . D 3 -2.818 -0.033 36.917 1 35.6 ? C2 DMS 701 B 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #