data_7Z2E # _model_server_result.job_id ati4zJECZi9JjhPRHqdEyg _model_server_result.datetime_utc '2024-10-19 08:24:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z2e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 7Z2E # _exptl.entry_id 7Z2E _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 366.419 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z2E _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z2E _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O3' DC 6 E DC 1 1_555 C P OMC 7 E OMC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.6 ? covale ? covale2 C O3' OMC 7 E OMC 2 1_555 C P DC 8 E DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? covale ? covale3 C O3' DC 8 E DC 3 1_555 C P OMC 9 E OMC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.595 ? covale ? covale4 C O3' OMC 9 E OMC 4 1_555 C P DC 10 E DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.602 ? hydrog WATSON-CRICK hydrog1 C N3 DC 6 E DC 1 1_555 C N1 DG 38 E DG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 C N4 DC 6 E DC 1 1_555 C O6 DG 38 E DG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 C O2 DC 6 E DC 1 1_555 C N2 DG 38 E DG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 C N3 OMC 7 E OMC 2 1_555 C N1 DG 37 E DG 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 C N4 OMC 7 E OMC 2 1_555 C O6 DG 37 E DG 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 C O2 OMC 7 E OMC 2 1_555 C N2 DG 37 E DG 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 C N3 DC 8 E DC 3 1_555 C N1 DG 36 E DG 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 C N4 DC 8 E DC 3 1_555 C O6 DG 36 E DG 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 C O2 DC 8 E DC 3 1_555 C N2 DG 36 E DG 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 C N3 OMC 9 E OMC 4 1_555 C N1 DG 35 E DG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 C N4 OMC 9 E OMC 4 1_555 C O6 DG 35 E DG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 C O2 OMC 9 E OMC 4 1_555 C N2 DG 35 E DG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 C N3 DC 10 E DC 5 1_555 C N1 DG 34 E DG 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 C N4 DC 10 E DC 5 1_555 C O6 DG 34 E DG 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 C O2 DC 10 E DC 5 1_555 C N2 DG 34 E DG 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 C N3 DC 11 E DC 6 1_555 C N1 DG 33 E DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 C N4 DC 11 E DC 6 1_555 C O6 DG 33 E DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 C O2 DC 11 E DC 6 1_555 C N2 DG 33 E DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 C N3 DC 12 E DC 7 1_555 C N1 DG 32 E DG 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 C N4 DC 12 E DC 7 1_555 C O6 DG 32 E DG 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 C O2 DC 12 E DC 7 1_555 C N2 DG 32 E DG 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 C N3 DT 13 E DT 8 1_555 C N1 DA 31 E DA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 C O4 DT 13 E DT 8 1_555 C N6 DA 31 E DA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 C N3 DT 14 E DT 9 1_555 C N1 DA 30 E DA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 C O4 DT 14 E DT 9 1_555 C N6 DA 30 E DA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 C N3 DC 15 E DC 10 1_555 C N1 DG 29 E DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 C N4 DC 15 E DC 10 1_555 C O6 DG 29 E DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 C O2 DC 15 E DC 10 1_555 C N2 DG 29 E DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 C N1 DG 16 E DG 11 1_555 C N3 DC 28 E DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 C N2 DG 16 E DG 11 1_555 C O2 DC 28 E DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 C O6 DG 16 E DG 11 1_555 C N4 DC 28 E DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 C N1 DG 17 E DG 12 1_555 C N3 DC 27 E DC 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 C N2 DG 17 E DG 12 1_555 C O2 DC 27 E DC 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 C O6 DG 17 E DG 12 1_555 C N4 DC 27 E DC 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 C N3 DT 18 E DT 13 1_555 C N1 DA 26 E DA 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog36 C O4 DT 18 E DT 13 1_555 C N6 DA 26 E DA 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog37 C N1 DG 19 E DG 14 1_555 C N3 DC 25 E DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog38 C N2 DG 19 E DG 14 1_555 C O2 DC 25 E DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog39 C O6 DG 19 E DG 14 1_555 C N4 DC 25 E DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog40 C N3 DC 20 E DC 15 1_555 C N1 DG 24 E DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog41 C N4 DC 20 E DC 15 1_555 C O6 DG 24 E DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog42 C O2 DC 20 E DC 15 1_555 C N2 DG 24 E DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C22 H18 N6' _chem_comp.formula_weight 366.419 _chem_comp.id T27 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Rilpivirine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C6 T27 doub 476 n y C1 C7 T27 sing 477 n n C1 C2 T27 sing 478 n y N2 C9 T27 doub 479 n y N2 C12 T27 sing 480 n y C3 C4 T27 sing 481 n y C3 C2 T27 doub 482 n y C3 C21 T27 sing 483 n n C4 C5 T27 doub 484 n y C5 C6 T27 sing 485 n y C5 C8 T27 sing 486 n n C6 N1 T27 sing 487 n n N1 C11 T27 sing 488 n n C9 C10 T27 sing 489 n y C10 C11 T27 doub 490 n y C11 N3 T27 sing 491 n y N3 C12 T27 doub 492 n y C12 N4 T27 sing 493 n n N4 C16 T27 sing 494 n n C13 C14 T27 doub 495 n y C13 C18 T27 sing 496 n y C13 C19 T27 sing 497 n n C14 C15 T27 sing 498 n y C15 C16 T27 doub 499 n y C16 C17 T27 sing 500 n y C17 C18 T27 doub 501 n y N5 C19 T27 trip 502 n n C20 C21 T27 doub 503 e n C20 C22 T27 sing 504 n n N6 C22 T27 trip 505 n n C4 H4 T27 sing 506 n n C7 H7 T27 sing 507 n n C7 H7A T27 sing 508 n n C7 H7B T27 sing 509 n n C2 H2 T27 sing 510 n n C8 H8 T27 sing 511 n n C8 H8A T27 sing 512 n n C8 H8B T27 sing 513 n n N1 HN1 T27 sing 514 n n C9 H9 T27 sing 515 n n C10 H10 T27 sing 516 n n N4 HN4 T27 sing 517 n n C14 H14 T27 sing 518 n n C15 H15 T27 sing 519 n n C17 H17 T27 sing 520 n n C18 H18 T27 sing 521 n n C20 H20 T27 sing 522 n n C21 H21 T27 sing 523 n n # _atom_sites.entry_id 7Z2E _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id T27 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 601 _pdbx_nonpoly_scheme.pdb_mon_id T27 _pdbx_nonpoly_scheme.auth_mon_id T27 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T27 . . . D 4 66.919 81.054 59.57 1 8.03 ? C1 T27 601 A 1 HETATM 2 N N2 T27 . . . D 4 70.696 79.606 63.606 1 8.03 ? N2 T27 601 A 1 HETATM 3 C C3 T27 . . . D 4 66.011 83.258 59.385 1 8.03 ? C3 T27 601 A 1 HETATM 4 C C4 T27 . . . D 4 67.285 83.789 59.508 1 8.03 ? C4 T27 601 A 1 HETATM 5 C C5 T27 . . . D 4 68.379 82.949 59.659 1 8.03 ? C5 T27 601 A 1 HETATM 6 C C6 T27 . . . D 4 68.194 81.577 59.691 1 8.03 ? C6 T27 601 A 1 HETATM 7 C C7 T27 . . . D 4 66.327 79.646 59.557 1 8.03 ? C7 T27 601 A 1 HETATM 8 C C2 T27 . . . D 4 65.823 81.886 59.417 1 8.03 ? C2 T27 601 A 1 HETATM 9 C C8 T27 . . . D 4 69.778 83.536 59.792 1 8.03 ? C8 T27 601 A 1 HETATM 10 N N1 T27 . . . D 4 69.336 80.687 59.85 1 8.03 ? N1 T27 601 A 1 HETATM 11 C C9 T27 . . . D 4 71.14 78.962 62.541 1 8.03 ? C9 T27 601 A 1 HETATM 12 C C10 T27 . . . D 4 70.7 79.311 61.311 1 8.03 ? C10 T27 601 A 1 HETATM 13 C C11 T27 . . . D 4 69.804 80.317 61.175 1 8.03 ? C11 T27 601 A 1 HETATM 14 N N3 T27 . . . D 4 69.362 80.96 62.242 1 8.03 ? N3 T27 601 A 1 HETATM 15 C C12 T27 . . . D 4 69.806 80.613 63.472 1 8.03 ? C12 T27 601 A 1 HETATM 16 N N4 T27 . . . D 4 69.332 81.302 64.66 1 8.03 ? N4 T27 601 A 1 HETATM 17 C C13 T27 . . . D 4 67.877 85.27 64.598 1 8.03 ? C13 T27 601 A 1 HETATM 18 C C14 T27 . . . D 4 69.14 84.998 65.096 1 8.03 ? C14 T27 601 A 1 HETATM 19 C C15 T27 . . . D 4 69.613 83.695 65.112 1 8.03 ? C15 T27 601 A 1 HETATM 20 C C16 T27 . . . D 4 68.826 82.665 64.629 1 8.03 ? C16 T27 601 A 1 HETATM 21 C C17 T27 . . . D 4 67.559 82.939 64.135 1 8.03 ? C17 T27 601 A 1 HETATM 22 C C18 T27 . . . D 4 67.084 84.24 64.117 1 8.03 ? C18 T27 601 A 1 HETATM 23 N N5 T27 . . . D 4 66.973 87.779 64.567 1 8.03 ? N5 T27 601 A 1 HETATM 24 C C19 T27 . . . D 4 67.357 86.709 64.58 1 8.03 ? C19 T27 601 A 1 HETATM 25 C C20 T27 . . . D 4 64.936 85.288 58.501 1 8.03 ? C20 T27 601 A 1 HETATM 26 C C21 T27 . . . D 4 64.812 84.195 59.22 1 8.03 ? C21 T27 601 A 1 HETATM 27 N N6 T27 . . . D 4 62.877 86.935 58.197 1 8.03 ? N6 T27 601 A 1 HETATM 28 C C22 T27 . . . D 4 63.752 86.233 58.327 1 8.03 ? C22 T27 601 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #