data_7Z3D # _model_server_result.job_id AnxG1k59Tz4pj8Xu3LsGfw _model_server_result.datetime_utc '2025-03-02 15:12:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z3d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7Z3D # _exptl.entry_id 7Z3D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z3D _cell.length_a 61.438 _cell.length_b 125.634 _cell.length_c 144.997 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z3D _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 62 A ASP 62 1_555 D MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc2 A OE2 GLU 93 A GLU 93 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc3 A OE1 GLU 93 A GLU 93 1_555 D MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc4 A ND1 HIS 96 A HIS 96 1_555 D MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc5 A OE1 GLU 161 A GLU 161 1_555 C MN MN . A MN 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc6 A OE1 GLU 161 A GLU 161 1_555 C MN MN . A MN 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc7 A OE2 GLU 161 A GLU 161 1_555 C MN MN . A MN 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc8 A OE2 GLU 161 A GLU 161 1_555 C MN MN . A MN 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc9 A OE1 GLU 195 A GLU 195 1_555 C MN MN . A MN 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc10 A OE1 GLU 195 A GLU 195 1_555 C MN MN . A MN 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc11 A OE2 GLU 195 A GLU 195 1_555 C MN MN . A MN 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc12 A OE2 GLU 195 A GLU 195 1_555 D MN MN . A MN 402 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc13 A OE2 GLU 195 A GLU 195 1_555 D MN MN . A MN 402 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc14 A ND1 HIS 198 A HIS 198 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7Z3D _atom_sites.fract_transf_matrix[1][1] 0.016277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00796 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006897 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MN A 1 401 1 MN MN . D 3 MN A 1 402 2 MN MN . E 4 UNX A 1 403 1 UNX UNX . F 5 FMN B 1 201 1120 FMN FMN . G 6 HOH A 1 501 102 HOH HOH . G 6 HOH A 2 502 89 HOH HOH . G 6 HOH A 3 503 34 HOH HOH . G 6 HOH A 4 504 150 HOH HOH . G 6 HOH A 5 505 134 HOH HOH . G 6 HOH A 6 506 118 HOH HOH . G 6 HOH A 7 507 105 HOH HOH . G 6 HOH A 8 508 136 HOH HOH . G 6 HOH A 9 509 149 HOH HOH . G 6 HOH A 10 510 33 HOH HOH . G 6 HOH A 11 511 123 HOH HOH . G 6 HOH A 12 512 15 HOH HOH . G 6 HOH A 13 513 126 HOH HOH . G 6 HOH A 14 514 93 HOH HOH . G 6 HOH A 15 515 40 HOH HOH . G 6 HOH A 16 516 133 HOH HOH . G 6 HOH A 17 517 91 HOH HOH . G 6 HOH A 18 518 26 HOH HOH . G 6 HOH A 19 519 7 HOH HOH . G 6 HOH A 20 520 9 HOH HOH . G 6 HOH A 21 521 35 HOH HOH . G 6 HOH A 22 522 76 HOH HOH . G 6 HOH A 23 523 42 HOH HOH . G 6 HOH A 24 524 4 HOH HOH . G 6 HOH A 25 525 153 HOH HOH . G 6 HOH A 26 526 3 HOH HOH . G 6 HOH A 27 527 58 HOH HOH . G 6 HOH A 28 528 79 HOH HOH . G 6 HOH A 29 529 50 HOH HOH . G 6 HOH A 30 530 29 HOH HOH . G 6 HOH A 31 531 158 HOH HOH . G 6 HOH A 32 532 37 HOH HOH . G 6 HOH A 33 533 18 HOH HOH . G 6 HOH A 34 534 84 HOH HOH . G 6 HOH A 35 535 41 HOH HOH . G 6 HOH A 36 536 1 HOH HOH . G 6 HOH A 37 537 109 HOH HOH . G 6 HOH A 38 538 97 HOH HOH . G 6 HOH A 39 539 145 HOH HOH . G 6 HOH A 40 540 98 HOH HOH . G 6 HOH A 41 541 38 HOH HOH . G 6 HOH A 42 542 87 HOH HOH . G 6 HOH A 43 543 69 HOH HOH . G 6 HOH A 44 544 46 HOH HOH . G 6 HOH A 45 545 20 HOH HOH . G 6 HOH A 46 546 103 HOH HOH . G 6 HOH A 47 547 92 HOH HOH . G 6 HOH A 48 548 94 HOH HOH . G 6 HOH A 49 549 6 HOH HOH . G 6 HOH A 50 550 169 HOH HOH . G 6 HOH A 51 551 66 HOH HOH . G 6 HOH A 52 552 113 HOH HOH . G 6 HOH A 53 553 77 HOH HOH . G 6 HOH A 54 554 138 HOH HOH . G 6 HOH A 55 555 122 HOH HOH . G 6 HOH A 56 556 5 HOH HOH . G 6 HOH A 57 557 43 HOH HOH . G 6 HOH A 58 558 36 HOH HOH . G 6 HOH A 59 559 59 HOH HOH . G 6 HOH A 60 560 82 HOH HOH . G 6 HOH A 61 561 39 HOH HOH . G 6 HOH A 62 562 12 HOH HOH . G 6 HOH A 63 563 8 HOH HOH . G 6 HOH A 64 564 65 HOH HOH . G 6 HOH A 65 565 49 HOH HOH . G 6 HOH A 66 566 10 HOH HOH . G 6 HOH A 67 567 67 HOH HOH . G 6 HOH A 68 568 73 HOH HOH . G 6 HOH A 69 569 24 HOH HOH . G 6 HOH A 70 570 16 HOH HOH . G 6 HOH A 71 571 22 HOH HOH . G 6 HOH A 72 572 62 HOH HOH . G 6 HOH A 73 573 44 HOH HOH . G 6 HOH A 74 574 47 HOH HOH . G 6 HOH A 75 575 30 HOH HOH . G 6 HOH A 76 576 19 HOH HOH . G 6 HOH A 77 577 28 HOH HOH . G 6 HOH A 78 578 108 HOH HOH . G 6 HOH A 79 579 21 HOH HOH . G 6 HOH A 80 580 140 HOH HOH . G 6 HOH A 81 581 112 HOH HOH . G 6 HOH A 82 582 17 HOH HOH . G 6 HOH A 83 583 71 HOH HOH . G 6 HOH A 84 584 101 HOH HOH . G 6 HOH A 85 585 132 HOH HOH . G 6 HOH A 86 586 137 HOH HOH . G 6 HOH A 87 587 167 HOH HOH . G 6 HOH A 88 588 144 HOH HOH . G 6 HOH A 89 589 25 HOH HOH . G 6 HOH A 90 590 63 HOH HOH . G 6 HOH A 91 591 53 HOH HOH . G 6 HOH A 92 592 121 HOH HOH . G 6 HOH A 93 593 27 HOH HOH . G 6 HOH A 94 594 57 HOH HOH . G 6 HOH A 95 595 11 HOH HOH . G 6 HOH A 96 596 32 HOH HOH . G 6 HOH A 97 597 78 HOH HOH . G 6 HOH A 98 598 142 HOH HOH . G 6 HOH A 99 599 74 HOH HOH . G 6 HOH A 100 600 70 HOH HOH . G 6 HOH A 101 601 146 HOH HOH . G 6 HOH A 102 602 80 HOH HOH . G 6 HOH A 103 603 75 HOH HOH . G 6 HOH A 104 604 72 HOH HOH . G 6 HOH A 105 605 61 HOH HOH . G 6 HOH A 106 606 107 HOH HOH . G 6 HOH A 107 607 152 HOH HOH . G 6 HOH A 108 608 148 HOH HOH . G 6 HOH A 109 609 139 HOH HOH . G 6 HOH A 110 610 125 HOH HOH . G 6 HOH A 111 611 173 HOH HOH . G 6 HOH A 112 612 85 HOH HOH . G 6 HOH A 113 613 56 HOH HOH . G 6 HOH A 114 614 115 HOH HOH . G 6 HOH A 115 615 106 HOH HOH . G 6 HOH A 116 616 88 HOH HOH . G 6 HOH A 117 617 119 HOH HOH . G 6 HOH A 118 618 45 HOH HOH . G 6 HOH A 119 619 54 HOH HOH . G 6 HOH A 120 620 100 HOH HOH . G 6 HOH A 121 621 147 HOH HOH . G 6 HOH A 122 622 124 HOH HOH . G 6 HOH A 123 623 141 HOH HOH . G 6 HOH A 124 624 160 HOH HOH . G 6 HOH A 125 625 99 HOH HOH . G 6 HOH A 126 626 157 HOH HOH . H 6 HOH B 1 301 90 HOH HOH . H 6 HOH B 2 302 170 HOH HOH . H 6 HOH B 3 303 165 HOH HOH . H 6 HOH B 4 304 128 HOH HOH . H 6 HOH B 5 305 31 HOH HOH . H 6 HOH B 6 306 164 HOH HOH . H 6 HOH B 7 307 95 HOH HOH . H 6 HOH B 8 308 155 HOH HOH . H 6 HOH B 9 309 117 HOH HOH . H 6 HOH B 10 310 120 HOH HOH . H 6 HOH B 11 311 23 HOH HOH . H 6 HOH B 12 312 111 HOH HOH . H 6 HOH B 13 313 166 HOH HOH . H 6 HOH B 14 314 55 HOH HOH . H 6 HOH B 15 315 51 HOH HOH . H 6 HOH B 16 316 60 HOH HOH . H 6 HOH B 17 317 129 HOH HOH . H 6 HOH B 18 318 162 HOH HOH . H 6 HOH B 19 319 83 HOH HOH . H 6 HOH B 20 320 13 HOH HOH . H 6 HOH B 21 321 86 HOH HOH . H 6 HOH B 22 322 2 HOH HOH . H 6 HOH B 23 323 52 HOH HOH . H 6 HOH B 24 324 64 HOH HOH . H 6 HOH B 25 325 151 HOH HOH . H 6 HOH B 26 326 154 HOH HOH . H 6 HOH B 27 327 159 HOH HOH . H 6 HOH B 28 328 14 HOH HOH . H 6 HOH B 29 329 68 HOH HOH . H 6 HOH B 30 330 81 HOH HOH . H 6 HOH B 31 331 110 HOH HOH . H 6 HOH B 32 332 116 HOH HOH . H 6 HOH B 33 333 48 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 22.578 _atom_site.Cartn_y 11.629 _atom_site.Cartn_z -0.73 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 47 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 1273 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #