data_7Z3I
#
_model_server_result.job_id            9ykH52mYLqfAqFvqz81CpQ 
_model_server_result.datetime_utc      '2024-12-31 02:40:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z3i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":203}' 
#
_entry.id    7Z3I 
#
_exptl.entry_id    7Z3I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7Z3I 
_cell.length_a            73.747 
_cell.length_b            73.747 
_cell.length_c            113.085 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z3I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,N 1 1 
B,H,I,J,K,L,M,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 73 A HIS 85 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc2 A SG CYS 147 A CYS 159 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc3 A ND1 HIS 154 A HIS 166 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc4 C CU CU . A CU 201 1_555 D O ACT . A ACT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc5 B ND1 HIS 73 B HIS 85 1_555 H CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc6 B SG CYS 147 B CYS 159 1_555 H CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc7 B ND1 HIS 154 B HIS 166 1_555 H CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc8 H CU CU . B CU 201 1_555 I OXT ACT . B ACT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     7Z3I 
_atom_sites.fract_transf_matrix[1][1]    0.01356 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01356 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008843 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CU A 1 201 1 CU CU . 
D 3 ACT A 1 202 1 ACT ACT . 
E 3 ACT A 1 203 3 ACT ACT . 
F 3 ACT A 1 204 4 ACT ACT . 
G 4 GOL A 1 205 4 GOL GOL . 
H 2 CU B 1 201 2 CU CU . 
I 3 ACT B 1 202 2 ACT ACT . 
J 4 GOL B 1 203 1 GOL GOL . 
K 4 GOL B 1 204 2 GOL GOL . 
L 4 GOL B 1 205 3 GOL GOL . 
M 4 GOL B 1 206 5 GOL GOL . 
N 5 HOH A 1 301 166 HOH HOH . 
N 5 HOH A 2 302 130 HOH HOH . 
N 5 HOH A 3 303 50 HOH HOH . 
N 5 HOH A 4 304 83 HOH HOH . 
N 5 HOH A 5 305 95 HOH HOH . 
N 5 HOH A 6 306 174 HOH HOH . 
N 5 HOH A 7 307 68 HOH HOH . 
N 5 HOH A 8 308 16 HOH HOH . 
N 5 HOH A 9 309 398 HOH HOH . 
N 5 HOH A 10 310 299 HOH HOH . 
N 5 HOH A 11 311 80 HOH HOH . 
N 5 HOH A 12 312 295 HOH HOH . 
N 5 HOH A 13 313 120 HOH HOH . 
N 5 HOH A 14 314 23 HOH HOH . 
N 5 HOH A 15 315 41 HOH HOH . 
N 5 HOH A 16 316 85 HOH HOH . 
N 5 HOH A 17 317 2 HOH HOH . 
N 5 HOH A 18 318 297 HOH HOH . 
N 5 HOH A 19 319 118 HOH HOH . 
N 5 HOH A 20 320 39 HOH HOH . 
N 5 HOH A 21 321 45 HOH HOH . 
N 5 HOH A 22 322 60 HOH HOH . 
N 5 HOH A 23 323 53 HOH HOH . 
N 5 HOH A 24 324 67 HOH HOH . 
N 5 HOH A 25 325 332 HOH HOH . 
N 5 HOH A 26 326 378 HOH HOH . 
N 5 HOH A 27 327 286 HOH HOH . 
N 5 HOH A 28 328 316 HOH HOH . 
N 5 HOH A 29 329 115 HOH HOH . 
N 5 HOH A 30 330 328 HOH HOH . 
N 5 HOH A 31 331 3 HOH HOH . 
N 5 HOH A 32 332 37 HOH HOH . 
N 5 HOH A 33 333 12 HOH HOH . 
N 5 HOH A 34 334 78 HOH HOH . 
N 5 HOH A 35 335 122 HOH HOH . 
N 5 HOH A 36 336 360 HOH HOH . 
N 5 HOH A 37 337 353 HOH HOH . 
N 5 HOH A 38 338 20 HOH HOH . 
N 5 HOH A 39 339 48 HOH HOH . 
N 5 HOH A 40 340 341 HOH HOH . 
N 5 HOH A 41 341 66 HOH HOH . 
N 5 HOH A 42 342 106 HOH HOH . 
N 5 HOH A 43 343 113 HOH HOH . 
N 5 HOH A 44 344 100 HOH HOH . 
N 5 HOH A 45 345 377 HOH HOH . 
N 5 HOH A 46 346 17 HOH HOH . 
N 5 HOH A 47 347 63 HOH HOH . 
N 5 HOH A 48 348 57 HOH HOH . 
N 5 HOH A 49 349 22 HOH HOH . 
N 5 HOH A 50 350 300 HOH HOH . 
N 5 HOH A 51 351 32 HOH HOH . 
N 5 HOH A 52 352 38 HOH HOH . 
N 5 HOH A 53 353 121 HOH HOH . 
N 5 HOH A 54 354 59 HOH HOH . 
N 5 HOH A 55 355 101 HOH HOH . 
N 5 HOH A 56 356 293 HOH HOH . 
N 5 HOH A 57 357 21 HOH HOH . 
N 5 HOH A 58 358 314 HOH HOH . 
N 5 HOH A 59 359 131 HOH HOH . 
N 5 HOH A 60 360 11 HOH HOH . 
N 5 HOH A 61 361 10 HOH HOH . 
N 5 HOH A 62 362 142 HOH HOH . 
N 5 HOH A 63 363 315 HOH HOH . 
N 5 HOH A 64 364 79 HOH HOH . 
N 5 HOH A 65 365 110 HOH HOH . 
N 5 HOH A 66 366 367 HOH HOH . 
N 5 HOH A 67 367 291 HOH HOH . 
N 5 HOH A 68 368 312 HOH HOH . 
N 5 HOH A 69 369 28 HOH HOH . 
N 5 HOH A 70 370 55 HOH HOH . 
N 5 HOH A 71 371 322 HOH HOH . 
N 5 HOH A 72 372 52 HOH HOH . 
N 5 HOH A 73 373 19 HOH HOH . 
N 5 HOH A 74 374 125 HOH HOH . 
N 5 HOH A 75 375 26 HOH HOH . 
N 5 HOH A 76 376 102 HOH HOH . 
N 5 HOH A 77 377 9 HOH HOH . 
N 5 HOH A 78 378 153 HOH HOH . 
N 5 HOH A 79 379 179 HOH HOH . 
N 5 HOH A 80 380 306 HOH HOH . 
N 5 HOH A 81 381 307 HOH HOH . 
N 5 HOH A 82 382 47 HOH HOH . 
N 5 HOH A 83 383 373 HOH HOH . 
N 5 HOH A 84 384 152 HOH HOH . 
N 5 HOH A 85 385 178 HOH HOH . 
N 5 HOH A 86 386 33 HOH HOH . 
N 5 HOH A 87 387 14 HOH HOH . 
N 5 HOH A 88 388 355 HOH HOH . 
N 5 HOH A 89 389 319 HOH HOH . 
N 5 HOH A 90 390 275 HOH HOH . 
N 5 HOH A 91 391 7 HOH HOH . 
N 5 HOH A 92 392 75 HOH HOH . 
N 5 HOH A 93 393 91 HOH HOH . 
N 5 HOH A 94 394 8 HOH HOH . 
N 5 HOH A 95 395 111 HOH HOH . 
N 5 HOH A 96 396 146 HOH HOH . 
N 5 HOH A 97 397 29 HOH HOH . 
N 5 HOH A 98 398 288 HOH HOH . 
N 5 HOH A 99 399 313 HOH HOH . 
N 5 HOH A 100 400 292 HOH HOH . 
N 5 HOH A 101 401 34 HOH HOH . 
N 5 HOH A 102 402 304 HOH HOH . 
N 5 HOH A 103 403 71 HOH HOH . 
N 5 HOH A 104 404 30 HOH HOH . 
N 5 HOH A 105 405 132 HOH HOH . 
N 5 HOH A 106 406 54 HOH HOH . 
N 5 HOH A 107 407 301 HOH HOH . 
N 5 HOH A 108 408 280 HOH HOH . 
N 5 HOH A 109 409 277 HOH HOH . 
N 5 HOH A 110 410 374 HOH HOH . 
N 5 HOH A 111 411 103 HOH HOH . 
N 5 HOH A 112 412 399 HOH HOH . 
N 5 HOH A 113 413 400 HOH HOH . 
N 5 HOH A 114 414 169 HOH HOH . 
N 5 HOH A 115 415 170 HOH HOH . 
N 5 HOH A 116 416 274 HOH HOH . 
N 5 HOH A 117 417 380 HOH HOH . 
N 5 HOH A 118 418 357 HOH HOH . 
N 5 HOH A 119 419 171 HOH HOH . 
N 5 HOH A 120 420 284 HOH HOH . 
N 5 HOH A 121 421 273 HOH HOH . 
N 5 HOH A 122 422 276 HOH HOH . 
N 5 HOH A 123 423 359 HOH HOH . 
N 5 HOH A 124 424 96 HOH HOH . 
N 5 HOH A 125 425 296 HOH HOH . 
N 5 HOH A 126 426 283 HOH HOH . 
O 5 HOH B 1 301 290 HOH HOH . 
O 5 HOH B 2 302 89 HOH HOH . 
O 5 HOH B 3 303 350 HOH HOH . 
O 5 HOH B 4 304 182 HOH HOH . 
O 5 HOH B 5 305 56 HOH HOH . 
O 5 HOH B 6 306 35 HOH HOH . 
O 5 HOH B 7 307 104 HOH HOH . 
O 5 HOH B 8 308 4 HOH HOH . 
O 5 HOH B 9 309 97 HOH HOH . 
O 5 HOH B 10 310 117 HOH HOH . 
O 5 HOH B 11 311 77 HOH HOH . 
O 5 HOH B 12 312 151 HOH HOH . 
O 5 HOH B 13 313 88 HOH HOH . 
O 5 HOH B 14 314 123 HOH HOH . 
O 5 HOH B 15 315 51 HOH HOH . 
O 5 HOH B 16 316 27 HOH HOH . 
O 5 HOH B 17 317 397 HOH HOH . 
O 5 HOH B 18 318 25 HOH HOH . 
O 5 HOH B 19 319 81 HOH HOH . 
O 5 HOH B 20 320 62 HOH HOH . 
O 5 HOH B 21 321 403 HOH HOH . 
O 5 HOH B 22 322 44 HOH HOH . 
O 5 HOH B 23 323 69 HOH HOH . 
O 5 HOH B 24 324 138 HOH HOH . 
O 5 HOH B 25 325 73 HOH HOH . 
O 5 HOH B 26 326 6 HOH HOH . 
O 5 HOH B 27 327 61 HOH HOH . 
O 5 HOH B 28 328 64 HOH HOH . 
O 5 HOH B 29 329 107 HOH HOH . 
O 5 HOH B 30 330 285 HOH HOH . 
O 5 HOH B 31 331 365 HOH HOH . 
O 5 HOH B 32 332 49 HOH HOH . 
O 5 HOH B 33 333 82 HOH HOH . 
O 5 HOH B 34 334 140 HOH HOH . 
O 5 HOH B 35 335 1 HOH HOH . 
O 5 HOH B 36 336 311 HOH HOH . 
O 5 HOH B 37 337 302 HOH HOH . 
O 5 HOH B 38 338 145 HOH HOH . 
O 5 HOH B 39 339 331 HOH HOH . 
O 5 HOH B 40 340 342 HOH HOH . 
O 5 HOH B 41 341 387 HOH HOH . 
O 5 HOH B 42 342 384 HOH HOH . 
O 5 HOH B 43 343 335 HOH HOH . 
O 5 HOH B 44 344 294 HOH HOH . 
O 5 HOH B 45 345 93 HOH HOH . 
O 5 HOH B 46 346 24 HOH HOH . 
O 5 HOH B 47 347 149 HOH HOH . 
O 5 HOH B 48 348 108 HOH HOH . 
O 5 HOH B 49 349 18 HOH HOH . 
O 5 HOH B 50 350 339 HOH HOH . 
O 5 HOH B 51 351 40 HOH HOH . 
O 5 HOH B 52 352 325 HOH HOH . 
O 5 HOH B 53 353 148 HOH HOH . 
O 5 HOH B 54 354 84 HOH HOH . 
O 5 HOH B 55 355 402 HOH HOH . 
O 5 HOH B 56 356 58 HOH HOH . 
O 5 HOH B 57 357 36 HOH HOH . 
O 5 HOH B 58 358 65 HOH HOH . 
O 5 HOH B 59 359 13 HOH HOH . 
O 5 HOH B 60 360 70 HOH HOH . 
O 5 HOH B 61 361 5 HOH HOH . 
O 5 HOH B 62 362 116 HOH HOH . 
O 5 HOH B 63 363 143 HOH HOH . 
O 5 HOH B 64 364 310 HOH HOH . 
O 5 HOH B 65 365 240 HOH HOH . 
O 5 HOH B 66 366 150 HOH HOH . 
O 5 HOH B 67 367 156 HOH HOH . 
O 5 HOH B 68 368 128 HOH HOH . 
O 5 HOH B 69 369 127 HOH HOH . 
O 5 HOH B 70 370 163 HOH HOH . 
O 5 HOH B 71 371 74 HOH HOH . 
O 5 HOH B 72 372 287 HOH HOH . 
O 5 HOH B 73 373 31 HOH HOH . 
O 5 HOH B 74 374 305 HOH HOH . 
O 5 HOH B 75 375 401 HOH HOH . 
O 5 HOH B 76 376 105 HOH HOH . 
O 5 HOH B 77 377 154 HOH HOH . 
O 5 HOH B 78 378 162 HOH HOH . 
O 5 HOH B 79 379 155 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 4 -52.942 -8.353 -0.602 1 62.08 ? C1 GOL 203 B 1 
HETATM 2 O O1 GOL . . . J 4 -52.851 -7.059 -0.018 1 62.42 ? O1 GOL 203 B 1 
HETATM 3 C C2 GOL . . . J 4 -52.026 -9.353 0.068 1 60.98 ? C2 GOL 203 B 1 
HETATM 4 O O2 GOL . . . J 4 -50.805 -8.695 0.41 1 67.06 ? O2 GOL 203 B 1 
HETATM 5 C C3 GOL . . . J 4 -52.645 -9.989 1.297 1 61.5 ? C3 GOL 203 B 1 
HETATM 6 O O3 GOL . . . J 4 -53.319 -11.215 1.025 1 57.49 ? O3 GOL 203 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           40 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#