data_7Z3V # _model_server_result.job_id eoTCQWhkHCxg4znZA3cJKg _model_server_result.datetime_utc '2024-10-19 13:20:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z3v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7Z3V # _exptl.entry_id 7Z3V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 660.535 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MYO-INOSITOL-HEXASULPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.27 _cell.angle_gamma 90 _cell.entry_id 7Z3V _cell.length_a 63.712 _cell.length_b 44.35 _cell.length_c 66.559 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z3V _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 79 A CYS 77 1_555 A SG CYS 110 A CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 135 A CYS 133 1_555 A SG CYS 410 A CYS 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 180 A CYS 178 1_555 A SG CYS 190 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 A SG CYS 384 A CYS 382 1_555 A SG CYS 393 A CYS 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc1 A O THR 41 A THR 39 1_555 D K K . A K 503 2_657 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc2 C O1 IHS . A IHS 502 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.071 ? metalc ? metalc3 C O4 IHS . A IHS 502 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.061 ? metalc ? metalc4 C O12 IHS . A IHS 502 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc5 C O13 IHS . A IHS 502 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc6 C O43 IHS . A IHS 502 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.374 ? # _chem_comp.formula 'C6 H12 O24 S6' _chem_comp.formula_weight 660.535 _chem_comp.id IHS _chem_comp.mon_nstd_flag . _chem_comp.name D-MYO-INOSITOL-HEXASULPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 IHS sing 152 n n C6 C1 IHS sing 153 n n C1 O1 IHS sing 154 n n C1 H1 IHS sing 155 n n O1 S1 IHS sing 156 n n O3 S1 IHS doub 157 n n O4 S1 IHS doub 158 n n S1 O2 IHS sing 159 n n C3 C2 IHS sing 160 n n C2 O12 IHS sing 161 n n C2 H2 IHS sing 162 n n O2 HO2 IHS sing 163 n n O22 S2 IHS doub 164 n n O12 S2 IHS sing 165 n n S2 O42 IHS doub 166 n n S2 O32 IHS sing 167 n n C4 C3 IHS sing 168 n n C3 O13 IHS sing 169 n n C3 H3 IHS sing 170 n n O43 S3 IHS doub 171 n n O23 S3 IHS doub 172 n n S3 O33 IHS sing 173 n n S3 O13 IHS sing 174 n n O14 C4 IHS sing 175 n n C4 C5 IHS sing 176 n n C4 H4 IHS sing 177 n n O34 S4 IHS doub 178 n n O24 S4 IHS doub 179 n n S4 O44 IHS sing 180 n n S4 O14 IHS sing 181 n n O15 C5 IHS sing 182 n n C5 C6 IHS sing 183 n n C5 H5 IHS sing 184 n n O45 S5 IHS doub 185 n n O25 S5 IHS doub 186 n n S5 O35 IHS sing 187 n n S5 O15 IHS sing 188 n n O16 C6 IHS sing 189 n n C6 H6 IHS sing 190 n n O16 S6 IHS sing 191 n n O36 S6 IHS doub 192 n n S6 O26 IHS doub 193 n n S6 O46 IHS sing 194 n n O32 HO32 IHS sing 195 n n O33 HO33 IHS sing 196 n n O35 HO35 IHS sing 197 n n O44 HO44 IHS sing 198 n n O46 HO46 IHS sing 199 n n # _atom_sites.entry_id 7Z3V _atom_sites.fract_transf_matrix[1][1] 0.015696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003128 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022548 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01532 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IHS A 1 501 1 IHS IHS . C 2 IHS A 1 502 2 IHS IHS . D 3 K A 1 503 1 K K . E 4 HOH A 1 601 72 HOH HOH . E 4 HOH A 2 602 12 HOH HOH . E 4 HOH A 3 603 101 HOH HOH . E 4 HOH A 4 604 82 HOH HOH . E 4 HOH A 5 605 59 HOH HOH . E 4 HOH A 6 606 10 HOH HOH . E 4 HOH A 7 607 74 HOH HOH . E 4 HOH A 8 608 87 HOH HOH . E 4 HOH A 9 609 25 HOH HOH . E 4 HOH A 10 610 67 HOH HOH . E 4 HOH A 11 611 22 HOH HOH . E 4 HOH A 12 612 79 HOH HOH . E 4 HOH A 13 613 76 HOH HOH . E 4 HOH A 14 614 53 HOH HOH . E 4 HOH A 15 615 1 HOH HOH . E 4 HOH A 16 616 57 HOH HOH . E 4 HOH A 17 617 38 HOH HOH . E 4 HOH A 18 618 77 HOH HOH . E 4 HOH A 19 619 95 HOH HOH . E 4 HOH A 20 620 8 HOH HOH . E 4 HOH A 21 621 92 HOH HOH . E 4 HOH A 22 622 36 HOH HOH . E 4 HOH A 23 623 6 HOH HOH . E 4 HOH A 24 624 15 HOH HOH . E 4 HOH A 25 625 44 HOH HOH . E 4 HOH A 26 626 33 HOH HOH . E 4 HOH A 27 627 21 HOH HOH . E 4 HOH A 28 628 42 HOH HOH . E 4 HOH A 29 629 29 HOH HOH . E 4 HOH A 30 630 47 HOH HOH . E 4 HOH A 31 631 3 HOH HOH . E 4 HOH A 32 632 30 HOH HOH . E 4 HOH A 33 633 81 HOH HOH . E 4 HOH A 34 634 51 HOH HOH . E 4 HOH A 35 635 9 HOH HOH . E 4 HOH A 36 636 54 HOH HOH . E 4 HOH A 37 637 7 HOH HOH . E 4 HOH A 38 638 31 HOH HOH . E 4 HOH A 39 639 4 HOH HOH . E 4 HOH A 40 640 86 HOH HOH . E 4 HOH A 41 641 63 HOH HOH . E 4 HOH A 42 642 68 HOH HOH . E 4 HOH A 43 643 18 HOH HOH . E 4 HOH A 44 644 32 HOH HOH . E 4 HOH A 45 645 48 HOH HOH . E 4 HOH A 46 646 49 HOH HOH . E 4 HOH A 47 647 71 HOH HOH . E 4 HOH A 48 648 5 HOH HOH . E 4 HOH A 49 649 34 HOH HOH . E 4 HOH A 50 650 2 HOH HOH . E 4 HOH A 51 651 78 HOH HOH . E 4 HOH A 52 652 93 HOH HOH . E 4 HOH A 53 653 75 HOH HOH . E 4 HOH A 54 654 46 HOH HOH . E 4 HOH A 55 655 85 HOH HOH . E 4 HOH A 56 656 65 HOH HOH . E 4 HOH A 57 657 100 HOH HOH . E 4 HOH A 58 658 66 HOH HOH . E 4 HOH A 59 659 62 HOH HOH . E 4 HOH A 60 660 35 HOH HOH . E 4 HOH A 61 661 58 HOH HOH . E 4 HOH A 62 662 26 HOH HOH . E 4 HOH A 63 663 23 HOH HOH . E 4 HOH A 64 664 41 HOH HOH . E 4 HOH A 65 665 16 HOH HOH . E 4 HOH A 66 666 19 HOH HOH . E 4 HOH A 67 667 43 HOH HOH . E 4 HOH A 68 668 84 HOH HOH . E 4 HOH A 69 669 20 HOH HOH . E 4 HOH A 70 670 64 HOH HOH . E 4 HOH A 71 671 90 HOH HOH . E 4 HOH A 72 672 97 HOH HOH . E 4 HOH A 73 673 27 HOH HOH . E 4 HOH A 74 674 55 HOH HOH . E 4 HOH A 75 675 14 HOH HOH . E 4 HOH A 76 676 13 HOH HOH . E 4 HOH A 77 677 40 HOH HOH . E 4 HOH A 78 678 52 HOH HOH . E 4 HOH A 79 679 89 HOH HOH . E 4 HOH A 80 680 70 HOH HOH . E 4 HOH A 81 681 94 HOH HOH . E 4 HOH A 82 682 61 HOH HOH . E 4 HOH A 83 683 73 HOH HOH . E 4 HOH A 84 684 24 HOH HOH . E 4 HOH A 85 685 11 HOH HOH . E 4 HOH A 86 686 56 HOH HOH . E 4 HOH A 87 687 88 HOH HOH . E 4 HOH A 88 688 91 HOH HOH . E 4 HOH A 89 689 80 HOH HOH . E 4 HOH A 90 690 17 HOH HOH . E 4 HOH A 91 691 96 HOH HOH . E 4 HOH A 92 692 83 HOH HOH . E 4 HOH A 93 693 98 HOH HOH . E 4 HOH A 94 694 39 HOH HOH . E 4 HOH A 95 695 50 HOH HOH . E 4 HOH A 96 696 45 HOH HOH . E 4 HOH A 97 697 28 HOH HOH . E 4 HOH A 98 698 60 HOH HOH . E 4 HOH A 99 699 69 HOH HOH . E 4 HOH A 100 700 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHS . . . C 2 12.91 -20.422 64.274 0.9 24.54 ? C1 IHS 502 A 1 HETATM 2 O O1 IHS . . . C 2 13.326 -21.839 64.366 0.9 23.12 ? O1 IHS 502 A 1 HETATM 3 S S1 IHS . . . C 2 13.669 -22.467 65.797 0.9 28.93 ? S1 IHS 502 A 1 HETATM 4 C C2 IHS . . . C 2 13.811 -19.772 63.24 0.9 23.82 ? C2 IHS 502 A 1 HETATM 5 O O2 IHS . . . C 2 12.47 -22.36 66.602 0.9 25.35 ? O2 IHS 502 A 1 HETATM 6 S S2 IHS . . . C 2 15.733 -18.011 63.099 0.9 23.79 ? S2 IHS 502 A 1 HETATM 7 C C3 IHS . . . C 2 13.625 -20.389 61.897 0.9 25.65 ? C3 IHS 502 A 1 HETATM 8 O O3 IHS . . . C 2 14.043 -23.836 65.544 0.9 22.45 ? O3 IHS 502 A 1 HETATM 9 S S3 IHS . . . C 2 14.809 -22.071 60.215 0.9 21.78 ? S3 IHS 502 A 1 HETATM 10 C C4 IHS . . . C 2 12.216 -20.25 61.423 0.9 26.79 ? C4 IHS 502 A 1 HETATM 11 O O4 IHS . . . C 2 14.77 -21.686 66.313 0.9 18.05 ? O4 IHS 502 A 1 HETATM 12 S S4 IHS . . . C 2 11.483 -18.128 60.006 0.9 22.23 ? S4 IHS 502 A 1 HETATM 13 C C5 IHS . . . C 2 11.288 -20.926 62.439 0.9 28 ? C5 IHS 502 A 1 HETATM 14 S S5 IHS . . . C 2 10.596 -23.452 62.792 0.9 42.02 ? S5 IHS 502 A 1 HETATM 15 C C6 IHS . . . C 2 11.496 -20.358 63.809 0.9 26.45 ? C6 IHS 502 A 1 HETATM 16 S S6 IHS . . . C 2 10.587 -18.802 65.716 0.9 33.73 ? S6 IHS 502 A 1 HETATM 17 O O12 IHS . . . C 2 15.132 -19.354 63.666 0.9 27.88 ? O12 IHS 502 A 1 HETATM 18 O O13 IHS . . . C 2 14.379 -21.62 61.67 0.9 25.77 ? O13 IHS 502 A 1 HETATM 19 O O14 IHS . . . C 2 11.964 -18.795 61.348 0.9 26.86 ? O14 IHS 502 A 1 HETATM 20 O O15 IHS . . . C 2 11.67 -22.357 62.467 0.9 27.25 ? O15 IHS 502 A 1 HETATM 21 O O16 IHS . . . C 2 10.736 -19.177 64.204 0.9 27.44 ? O16 IHS 502 A 1 HETATM 22 O O22 IHS . . . C 2 15.082 -17.757 61.832 0.9 23.84 ? O22 IHS 502 A 1 HETATM 23 O O23 IHS . . . C 2 14.66 -21.014 59.285 0.9 20.37 ? O23 IHS 502 A 1 HETATM 24 O O24 IHS . . . C 2 12.175 -16.896 59.909 0.9 14.79 ? O24 IHS 502 A 1 HETATM 25 O O25 IHS . . . C 2 9.557 -23.307 61.838 0.9 21.33 ? O25 IHS 502 A 1 HETATM 26 O O26 IHS . . . C 2 9.657 -17.738 65.707 0.9 24.06 ? O26 IHS 502 A 1 HETATM 27 O O32 IHS . . . C 2 15.423 -17.046 64.126 0.9 21.46 ? O32 IHS 502 A 1 HETATM 28 O O33 IHS . . . C 2 13.867 -23.21 59.759 0.9 16.25 ? O33 IHS 502 A 1 HETATM 29 O O34 IHS . . . C 2 10.072 -18.144 60.005 0.9 16.92 ? O34 IHS 502 A 1 HETATM 30 O O35 IHS . . . C 2 11.284 -24.687 62.88 0.9 24.5 ? O35 IHS 502 A 1 HETATM 31 O O36 IHS . . . C 2 10.279 -19.976 66.444 0.9 35.32 ? O36 IHS 502 A 1 HETATM 32 O O42 IHS . . . C 2 17.147 -18.293 62.971 0.9 25.21 ? O42 IHS 502 A 1 HETATM 33 O O43 IHS . . . C 2 16.086 -22.638 60.428 0.9 17.11 ? O43 IHS 502 A 1 HETATM 34 O O44 IHS . . . C 2 11.949 -19.053 58.849 0.9 20.87 ? O44 IHS 502 A 1 HETATM 35 O O45 IHS . . . C 2 10.017 -23.14 64.198 0.9 28.5 ? O45 IHS 502 A 1 HETATM 36 O O46 IHS . . . C 2 11.928 -18.251 66.246 0.9 24.53 ? O46 IHS 502 A 1 HETATM 37 H H1 IHS . . . C 2 12.991 -19.996 65.163 0.9 29.45 ? H1 IHS 502 A 1 HETATM 38 H H2 IHS . . . C 2 13.55 -18.824 63.138 0.9 28.59 ? H2 IHS 502 A 1 HETATM 39 H H3 IHS . . . C 2 14.142 -19.909 61.204 0.9 30.78 ? H3 IHS 502 A 1 HETATM 40 H H4 IHS . . . C 2 12.049 -20.642 60.531 0.9 32.15 ? H4 IHS 502 A 1 HETATM 41 H H5 IHS . . . C 2 10.339 -20.825 62.181 0.9 33.6 ? H5 IHS 502 A 1 HETATM 42 H H6 IHS . . . C 2 10.97 -20.959 64.391 0.9 31.75 ? H6 IHS 502 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 42 #