data_7Z4U # _model_server_result.job_id KMpunmaXMxtVq1WYTsI6fQ _model_server_result.datetime_utc '2025-02-17 14:36:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z4u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":604}' # _entry.id 7Z4U # _exptl.entry_id 7Z4U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7Z4U _cell.length_a 80.83 _cell.length_b 80.83 _cell.length_c 113.39 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z4U _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 152 n n C1 C2 GOL sing 153 n n C1 H11 GOL sing 154 n n C1 H12 GOL sing 155 n n O1 HO1 GOL sing 156 n n C2 O2 GOL sing 157 n n C2 C3 GOL sing 158 n n C2 H2 GOL sing 159 n n O2 HO2 GOL sing 160 n n C3 O3 GOL sing 161 n n C3 H31 GOL sing 162 n n C3 H32 GOL sing 163 n n O3 HO3 GOL sing 164 n n # _atom_sites.entry_id 7Z4U _atom_sites.fract_transf_matrix[1][1] 0.012372 _atom_sites.fract_transf_matrix[1][2] 0.007143 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008819 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 601 1 SO4 SO4 . D 2 SO4 A 1 602 3 SO4 SO4 . E 3 CL A 1 603 5 CL CL . F 4 FIQ A 1 604 6 FIQ LIG . G 2 SO4 B 1 601 2 SO4 SO4 . H 2 SO4 B 1 602 4 SO4 SO4 . I 4 FIQ B 1 603 7 FIQ LIG . J 5 GOL B 1 604 8 GOL GOL . K 6 HOH A 1 701 124 HOH HOH . K 6 HOH A 2 702 52 HOH HOH . K 6 HOH A 3 703 3 HOH HOH . K 6 HOH A 4 704 7 HOH HOH . K 6 HOH A 5 705 31 HOH HOH . K 6 HOH A 6 706 37 HOH HOH . K 6 HOH A 7 707 55 HOH HOH . K 6 HOH A 8 708 20 HOH HOH . K 6 HOH A 9 709 46 HOH HOH . K 6 HOH A 10 710 38 HOH HOH . K 6 HOH A 11 711 9 HOH HOH . K 6 HOH A 12 712 69 HOH HOH . K 6 HOH A 13 713 25 HOH HOH . K 6 HOH A 14 714 30 HOH HOH . K 6 HOH A 15 715 50 HOH HOH . K 6 HOH A 16 716 28 HOH HOH . K 6 HOH A 17 717 15 HOH HOH . K 6 HOH A 18 718 59 HOH HOH . K 6 HOH A 19 719 94 HOH HOH . K 6 HOH A 20 720 103 HOH HOH . K 6 HOH A 21 721 84 HOH HOH . K 6 HOH A 22 722 21 HOH HOH . K 6 HOH A 23 723 36 HOH HOH . K 6 HOH A 24 724 6 HOH HOH . K 6 HOH A 25 725 16 HOH HOH . K 6 HOH A 26 726 58 HOH HOH . K 6 HOH A 27 727 73 HOH HOH . K 6 HOH A 28 728 1 HOH HOH . K 6 HOH A 29 729 27 HOH HOH . K 6 HOH A 30 730 122 HOH HOH . K 6 HOH A 31 731 100 HOH HOH . K 6 HOH A 32 732 93 HOH HOH . K 6 HOH A 33 733 60 HOH HOH . K 6 HOH A 34 734 118 HOH HOH . K 6 HOH A 35 735 127 HOH HOH . K 6 HOH A 36 736 19 HOH HOH . K 6 HOH A 37 737 129 HOH HOH . K 6 HOH A 38 738 14 HOH HOH . K 6 HOH A 39 739 72 HOH HOH . K 6 HOH A 40 740 106 HOH HOH . K 6 HOH A 41 741 62 HOH HOH . K 6 HOH A 42 742 54 HOH HOH . K 6 HOH A 43 743 23 HOH HOH . K 6 HOH A 44 744 86 HOH HOH . K 6 HOH A 45 745 11 HOH HOH . K 6 HOH A 46 746 47 HOH HOH . K 6 HOH A 47 747 75 HOH HOH . K 6 HOH A 48 748 65 HOH HOH . K 6 HOH A 49 749 35 HOH HOH . K 6 HOH A 50 750 22 HOH HOH . K 6 HOH A 51 751 102 HOH HOH . K 6 HOH A 52 752 70 HOH HOH . K 6 HOH A 53 753 18 HOH HOH . K 6 HOH A 54 754 95 HOH HOH . K 6 HOH A 55 755 91 HOH HOH . K 6 HOH A 56 756 4 HOH HOH . K 6 HOH A 57 757 99 HOH HOH . K 6 HOH A 58 758 120 HOH HOH . K 6 HOH A 59 759 105 HOH HOH . K 6 HOH A 60 760 51 HOH HOH . K 6 HOH A 61 761 88 HOH HOH . K 6 HOH A 62 762 116 HOH HOH . K 6 HOH A 63 763 98 HOH HOH . K 6 HOH A 64 764 112 HOH HOH . K 6 HOH A 65 765 121 HOH HOH . K 6 HOH A 66 766 114 HOH HOH . K 6 HOH A 67 767 49 HOH HOH . K 6 HOH A 68 768 107 HOH HOH . K 6 HOH A 69 769 77 HOH HOH . K 6 HOH A 70 770 83 HOH HOH . K 6 HOH A 71 771 92 HOH HOH . L 6 HOH B 1 701 76 HOH HOH . L 6 HOH B 2 702 17 HOH HOH . L 6 HOH B 3 703 39 HOH HOH . L 6 HOH B 4 704 57 HOH HOH . L 6 HOH B 5 705 24 HOH HOH . L 6 HOH B 6 706 113 HOH HOH . L 6 HOH B 7 707 48 HOH HOH . L 6 HOH B 8 708 82 HOH HOH . L 6 HOH B 9 709 104 HOH HOH . L 6 HOH B 10 710 45 HOH HOH . L 6 HOH B 11 711 78 HOH HOH . L 6 HOH B 12 712 81 HOH HOH . L 6 HOH B 13 713 66 HOH HOH . L 6 HOH B 14 714 41 HOH HOH . L 6 HOH B 15 715 8 HOH HOH . L 6 HOH B 16 716 63 HOH HOH . L 6 HOH B 17 717 115 HOH HOH . L 6 HOH B 18 718 110 HOH HOH . L 6 HOH B 19 719 74 HOH HOH . L 6 HOH B 20 720 117 HOH HOH . L 6 HOH B 21 721 5 HOH HOH . L 6 HOH B 22 722 128 HOH HOH . L 6 HOH B 23 723 97 HOH HOH . L 6 HOH B 24 724 56 HOH HOH . L 6 HOH B 25 725 96 HOH HOH . L 6 HOH B 26 726 40 HOH HOH . L 6 HOH B 27 727 32 HOH HOH . L 6 HOH B 28 728 53 HOH HOH . L 6 HOH B 29 729 89 HOH HOH . L 6 HOH B 30 730 12 HOH HOH . L 6 HOH B 31 731 101 HOH HOH . L 6 HOH B 32 732 111 HOH HOH . L 6 HOH B 33 733 125 HOH HOH . L 6 HOH B 34 734 119 HOH HOH . L 6 HOH B 35 735 42 HOH HOH . L 6 HOH B 36 736 64 HOH HOH . L 6 HOH B 37 737 61 HOH HOH . L 6 HOH B 38 738 10 HOH HOH . L 6 HOH B 39 739 13 HOH HOH . L 6 HOH B 40 740 29 HOH HOH . L 6 HOH B 41 741 34 HOH HOH . L 6 HOH B 42 742 33 HOH HOH . L 6 HOH B 43 743 126 HOH HOH . L 6 HOH B 44 744 44 HOH HOH . L 6 HOH B 45 745 71 HOH HOH . L 6 HOH B 46 746 130 HOH HOH . L 6 HOH B 47 747 67 HOH HOH . L 6 HOH B 48 748 85 HOH HOH . L 6 HOH B 49 749 43 HOH HOH . L 6 HOH B 50 750 87 HOH HOH . L 6 HOH B 51 751 123 HOH HOH . L 6 HOH B 52 752 26 HOH HOH . L 6 HOH B 53 753 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . J 5 33.031 45.109 -4.876 1 51.85 ? C1 GOL 604 B 1 HETATM 2 O O1 GOL . . . J 5 33.705 45.063 -6.125 1 48.2 ? O1 GOL 604 B 1 HETATM 3 C C2 GOL . . . J 5 32.34 43.733 -4.673 1 54.89 ? C2 GOL 604 B 1 HETATM 4 O O2 GOL . . . J 5 32.708 42.821 -5.656 1 55.62 ? O2 GOL 604 B 1 HETATM 5 C C3 GOL . . . J 5 30.777 43.983 -4.591 1 52.23 ? C3 GOL 604 B 1 HETATM 6 O O3 GOL . . . J 5 30.523 45.351 -4.842 1 52.3 ? O3 GOL 604 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #