data_7Z5A # _model_server_result.job_id Au3ZGPgrefvZwN5VYkKmjg _model_server_result.datetime_utc '2024-10-18 18:15:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z5a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7Z5A # _exptl.entry_id 7Z5A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z5A _cell.length_a 56.117 _cell.length_b 71.528 _cell.length_c 94.437 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z5A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N MET 1 A MET 1 1_555 B C1' PED 7 E PED 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.41 ? covale ? covale2 B O3' DT 6 E DT 6 1_555 B P PED 7 E PED 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.626 ? covale ? covale3 B O3' PED 7 E PED 7 1_555 B P DA 8 E DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? metalc ? metalc1 A SG CYS 255 A CYS 255 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 A SG CYS 258 A CYS 258 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc3 A SG CYS 277 A CYS 277 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc4 A SG CYS 280 A CYS 280 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? hydrog WATSON-CRICK hydrog1 B N1 DA 8 E DA 8 1_555 B N3 DT 18 E DT 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N6 DA 8 E DA 8 1_555 B O4 DT 18 E DT 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N3 DC 9 E DC 9 1_555 B N1 DG 17 E DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N4 DC 9 E DC 9 1_555 B O6 DG 17 E DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B O2 DC 9 E DC 9 1_555 B N2 DG 17 E DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N1 DG 10 E DG 10 1_555 B N3 DC 16 E DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N2 DG 10 E DG 10 1_555 B O2 DC 16 E DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B O6 DG 10 E DG 10 1_555 B N4 DC 16 E DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N3 DC 11 E DC 11 1_555 B N1 DG 15 E DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N4 DC 11 E DC 11 1_555 B O6 DG 15 E DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B O2 DC 11 E DC 11 1_555 B N2 DG 15 E DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog12 B N2 DG 12 E DG 12 1_555 B N7 DA 14 E DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog13 B N3 DG 12 E DG 12 1_555 B N6 DA 14 E DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7Z5A _atom_sites.fract_transf_matrix[1][1] 0.01782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01398 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 1 ZN ZN . D 4 HOH A 1 501 113 HOH HOH . D 4 HOH A 2 502 75 HOH HOH . D 4 HOH A 3 503 59 HOH HOH . D 4 HOH A 4 504 87 HOH HOH . D 4 HOH A 5 505 89 HOH HOH . D 4 HOH A 6 506 7 HOH HOH . D 4 HOH A 7 507 28 HOH HOH . D 4 HOH A 8 508 50 HOH HOH . D 4 HOH A 9 509 47 HOH HOH . D 4 HOH A 10 510 30 HOH HOH . D 4 HOH A 11 511 12 HOH HOH . D 4 HOH A 12 512 71 HOH HOH . D 4 HOH A 13 513 35 HOH HOH . D 4 HOH A 14 514 27 HOH HOH . D 4 HOH A 15 515 41 HOH HOH . D 4 HOH A 16 516 100 HOH HOH . D 4 HOH A 17 517 10 HOH HOH . D 4 HOH A 18 518 64 HOH HOH . D 4 HOH A 19 519 135 HOH HOH . D 4 HOH A 20 520 39 HOH HOH . D 4 HOH A 21 521 84 HOH HOH . D 4 HOH A 22 522 40 HOH HOH . D 4 HOH A 23 523 45 HOH HOH . D 4 HOH A 24 524 8 HOH HOH . D 4 HOH A 25 525 130 HOH HOH . D 4 HOH A 26 526 24 HOH HOH . D 4 HOH A 27 527 2 HOH HOH . D 4 HOH A 28 528 19 HOH HOH . D 4 HOH A 29 529 52 HOH HOH . D 4 HOH A 30 530 92 HOH HOH . D 4 HOH A 31 531 128 HOH HOH . D 4 HOH A 32 532 67 HOH HOH . D 4 HOH A 33 533 49 HOH HOH . D 4 HOH A 34 534 116 HOH HOH . D 4 HOH A 35 535 20 HOH HOH . D 4 HOH A 36 536 5 HOH HOH . D 4 HOH A 37 537 13 HOH HOH . D 4 HOH A 38 538 53 HOH HOH . D 4 HOH A 39 539 68 HOH HOH . D 4 HOH A 40 540 14 HOH HOH . D 4 HOH A 41 541 66 HOH HOH . D 4 HOH A 42 542 11 HOH HOH . D 4 HOH A 43 543 3 HOH HOH . D 4 HOH A 44 544 1 HOH HOH . D 4 HOH A 45 545 21 HOH HOH . D 4 HOH A 46 546 16 HOH HOH . D 4 HOH A 47 547 15 HOH HOH . D 4 HOH A 48 548 18 HOH HOH . D 4 HOH A 49 549 32 HOH HOH . D 4 HOH A 50 550 63 HOH HOH . D 4 HOH A 51 551 145 HOH HOH . D 4 HOH A 52 552 123 HOH HOH . D 4 HOH A 53 553 31 HOH HOH . D 4 HOH A 54 554 34 HOH HOH . D 4 HOH A 55 555 140 HOH HOH . D 4 HOH A 56 556 4 HOH HOH . D 4 HOH A 57 557 48 HOH HOH . D 4 HOH A 58 558 17 HOH HOH . D 4 HOH A 59 559 26 HOH HOH . D 4 HOH A 60 560 55 HOH HOH . D 4 HOH A 61 561 138 HOH HOH . D 4 HOH A 62 562 93 HOH HOH . D 4 HOH A 63 563 36 HOH HOH . D 4 HOH A 64 564 54 HOH HOH . D 4 HOH A 65 565 143 HOH HOH . D 4 HOH A 66 566 60 HOH HOH . D 4 HOH A 67 567 42 HOH HOH . D 4 HOH A 68 568 86 HOH HOH . D 4 HOH A 69 569 9 HOH HOH . D 4 HOH A 70 570 57 HOH HOH . D 4 HOH A 71 571 120 HOH HOH . D 4 HOH A 72 572 80 HOH HOH . D 4 HOH A 73 573 133 HOH HOH . D 4 HOH A 74 574 46 HOH HOH . D 4 HOH A 75 575 88 HOH HOH . D 4 HOH A 76 576 125 HOH HOH . D 4 HOH A 77 577 136 HOH HOH . D 4 HOH A 78 578 114 HOH HOH . D 4 HOH A 79 579 146 HOH HOH . D 4 HOH A 80 580 23 HOH HOH . D 4 HOH A 81 581 111 HOH HOH . D 4 HOH A 82 582 79 HOH HOH . D 4 HOH A 83 583 139 HOH HOH . D 4 HOH A 84 584 25 HOH HOH . D 4 HOH A 85 585 110 HOH HOH . D 4 HOH A 86 586 74 HOH HOH . D 4 HOH A 87 587 90 HOH HOH . D 4 HOH A 88 588 38 HOH HOH . D 4 HOH A 89 589 82 HOH HOH . D 4 HOH A 90 590 51 HOH HOH . D 4 HOH A 91 591 137 HOH HOH . D 4 HOH A 92 592 117 HOH HOH . D 4 HOH A 93 593 99 HOH HOH . D 4 HOH A 94 594 96 HOH HOH . D 4 HOH A 95 595 73 HOH HOH . D 4 HOH A 96 596 106 HOH HOH . D 4 HOH A 97 597 121 HOH HOH . D 4 HOH A 98 598 102 HOH HOH . D 4 HOH A 99 599 72 HOH HOH . D 4 HOH A 100 600 62 HOH HOH . D 4 HOH A 101 601 97 HOH HOH . D 4 HOH A 102 602 78 HOH HOH . E 4 HOH E 1 101 6 HOH HOH . E 4 HOH E 2 102 85 HOH HOH . E 4 HOH E 3 103 95 HOH HOH . E 4 HOH E 4 104 91 HOH HOH . E 4 HOH E 5 105 29 HOH HOH . E 4 HOH E 6 106 33 HOH HOH . E 4 HOH E 7 107 109 HOH HOH . E 4 HOH E 8 108 115 HOH HOH . E 4 HOH E 9 109 43 HOH HOH . E 4 HOH E 10 110 94 HOH HOH . E 4 HOH E 11 111 104 HOH HOH . E 4 HOH E 12 112 107 HOH HOH . E 4 HOH E 13 113 56 HOH HOH . E 4 HOH E 14 114 22 HOH HOH . E 4 HOH E 15 115 132 HOH HOH . E 4 HOH E 16 116 44 HOH HOH . E 4 HOH E 17 117 81 HOH HOH . E 4 HOH E 18 118 61 HOH HOH . E 4 HOH E 19 119 70 HOH HOH . E 4 HOH E 20 120 144 HOH HOH . E 4 HOH E 21 121 131 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -30.024 _atom_site.Cartn_y -7.161 _atom_site.Cartn_z -11.781 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #