data_7Z5M
#
_model_server_result.job_id            oogooKjX8NS_9ICBEIW0uQ 
_model_server_result.datetime_utc      '2024-11-29 03:28:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z5m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":604}' 
#
_entry.id    7Z5M 
#
_exptl.entry_id    7Z5M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7Z5M 
_cell.length_a            80.33 
_cell.length_b            80.33 
_cell.length_c            114.03 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z5M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    'P 65' 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,R 1 1 
B,K,L,M,N,O,P,Q,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 J N N 
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
? 5 Q N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 151 n n 
C1 C2 GOL sing 152 n n 
C1 H11 GOL sing 153 n n 
C1 H12 GOL sing 154 n n 
O1 HO1 GOL sing 155 n n 
C2 O2 GOL sing 156 n n 
C2 C3 GOL sing 157 n n 
C2 H2 GOL sing 158 n n 
O2 HO2 GOL sing 159 n n 
C3 O3 GOL sing 160 n n 
C3 H31 GOL sing 161 n n 
C3 H32 GOL sing 162 n n 
O3 HO3 GOL sing 163 n n 
#
_atom_sites.entry_id                     7Z5M 
_atom_sites.fract_transf_matrix[1][1]    0.012449 
_atom_sites.fract_transf_matrix[1][2]    0.007187 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014374 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00877 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 601 1 SO4 SO4 . 
D 2 SO4 A 1 602 2 SO4 SO4 . 
E 2 SO4 A 1 603 3 SO4 SO4 . 
F 3 CL A 1 604 4 CL CL . 
G 3 CL A 1 605 6 CL CL . 
H 4 5ZK A 1 606 12 5ZK LIG . 
I 5 GOL A 1 607 13 GOL GOL . 
J 5 GOL A 1 608 14 GOL GOL . 
K 3 CL B 1 601 5 CL CL . 
L 4 5ZK B 1 602 7 5ZK LIG . 
M 5 GOL B 1 603 8 GOL GOL . 
N 5 GOL B 1 604 9 GOL GOL . 
O 5 GOL B 1 605 10 GOL GOL . 
P 5 GOL B 1 606 11 GOL GOL . 
Q 5 GOL B 1 607 15 GOL GOL . 
R 6 HOH A 1 701 89 HOH HOH . 
R 6 HOH A 2 702 108 HOH HOH . 
R 6 HOH A 3 703 44 HOH HOH . 
R 6 HOH A 4 704 104 HOH HOH . 
R 6 HOH A 5 705 64 HOH HOH . 
R 6 HOH A 6 706 4 HOH HOH . 
R 6 HOH A 7 707 74 HOH HOH . 
R 6 HOH A 8 708 106 HOH HOH . 
R 6 HOH A 9 709 80 HOH HOH . 
R 6 HOH A 10 710 173 HOH HOH . 
R 6 HOH A 11 711 16 HOH HOH . 
R 6 HOH A 12 712 137 HOH HOH . 
R 6 HOH A 13 713 177 HOH HOH . 
R 6 HOH A 14 714 93 HOH HOH . 
R 6 HOH A 15 715 25 HOH HOH . 
R 6 HOH A 16 716 127 HOH HOH . 
R 6 HOH A 17 717 91 HOH HOH . 
R 6 HOH A 18 718 67 HOH HOH . 
R 6 HOH A 19 719 46 HOH HOH . 
R 6 HOH A 20 720 35 HOH HOH . 
R 6 HOH A 21 721 10 HOH HOH . 
R 6 HOH A 22 722 8 HOH HOH . 
R 6 HOH A 23 723 21 HOH HOH . 
R 6 HOH A 24 724 13 HOH HOH . 
R 6 HOH A 25 725 17 HOH HOH . 
R 6 HOH A 26 726 28 HOH HOH . 
R 6 HOH A 27 727 83 HOH HOH . 
R 6 HOH A 28 728 73 HOH HOH . 
R 6 HOH A 29 729 56 HOH HOH . 
R 6 HOH A 30 730 36 HOH HOH . 
R 6 HOH A 31 731 18 HOH HOH . 
R 6 HOH A 32 732 5 HOH HOH . 
R 6 HOH A 33 733 12 HOH HOH . 
R 6 HOH A 34 734 15 HOH HOH . 
R 6 HOH A 35 735 3 HOH HOH . 
R 6 HOH A 36 736 68 HOH HOH . 
R 6 HOH A 37 737 52 HOH HOH . 
R 6 HOH A 38 738 124 HOH HOH . 
R 6 HOH A 39 739 84 HOH HOH . 
R 6 HOH A 40 740 61 HOH HOH . 
R 6 HOH A 41 741 1 HOH HOH . 
R 6 HOH A 42 742 144 HOH HOH . 
R 6 HOH A 43 743 27 HOH HOH . 
R 6 HOH A 44 744 140 HOH HOH . 
R 6 HOH A 45 745 49 HOH HOH . 
R 6 HOH A 46 746 43 HOH HOH . 
R 6 HOH A 47 747 63 HOH HOH . 
R 6 HOH A 48 748 22 HOH HOH . 
R 6 HOH A 49 749 53 HOH HOH . 
R 6 HOH A 50 750 152 HOH HOH . 
R 6 HOH A 51 751 34 HOH HOH . 
R 6 HOH A 52 752 39 HOH HOH . 
R 6 HOH A 53 753 101 HOH HOH . 
R 6 HOH A 54 754 154 HOH HOH . 
R 6 HOH A 55 755 168 HOH HOH . 
R 6 HOH A 56 756 57 HOH HOH . 
R 6 HOH A 57 757 59 HOH HOH . 
R 6 HOH A 58 758 54 HOH HOH . 
R 6 HOH A 59 759 165 HOH HOH . 
R 6 HOH A 60 760 111 HOH HOH . 
R 6 HOH A 61 761 99 HOH HOH . 
R 6 HOH A 62 762 160 HOH HOH . 
R 6 HOH A 63 763 172 HOH HOH . 
R 6 HOH A 64 764 130 HOH HOH . 
R 6 HOH A 65 765 40 HOH HOH . 
R 6 HOH A 66 766 14 HOH HOH . 
R 6 HOH A 67 767 114 HOH HOH . 
R 6 HOH A 68 768 162 HOH HOH . 
R 6 HOH A 69 769 20 HOH HOH . 
R 6 HOH A 70 770 23 HOH HOH . 
R 6 HOH A 71 771 31 HOH HOH . 
R 6 HOH A 72 772 70 HOH HOH . 
R 6 HOH A 73 773 105 HOH HOH . 
R 6 HOH A 74 774 178 HOH HOH . 
R 6 HOH A 75 775 123 HOH HOH . 
R 6 HOH A 76 776 112 HOH HOH . 
R 6 HOH A 77 777 79 HOH HOH . 
R 6 HOH A 78 778 41 HOH HOH . 
R 6 HOH A 79 779 136 HOH HOH . 
R 6 HOH A 80 780 171 HOH HOH . 
R 6 HOH A 81 781 163 HOH HOH . 
R 6 HOH A 82 782 71 HOH HOH . 
R 6 HOH A 83 783 113 HOH HOH . 
R 6 HOH A 84 784 77 HOH HOH . 
R 6 HOH A 85 785 128 HOH HOH . 
R 6 HOH A 86 786 119 HOH HOH . 
R 6 HOH A 87 787 48 HOH HOH . 
R 6 HOH A 88 788 181 HOH HOH . 
R 6 HOH A 89 789 92 HOH HOH . 
R 6 HOH A 90 790 161 HOH HOH . 
R 6 HOH A 91 791 2 HOH HOH . 
R 6 HOH A 92 792 69 HOH HOH . 
R 6 HOH A 93 793 87 HOH HOH . 
R 6 HOH A 94 794 96 HOH HOH . 
R 6 HOH A 95 795 116 HOH HOH . 
R 6 HOH A 96 796 122 HOH HOH . 
R 6 HOH A 97 797 121 HOH HOH . 
R 6 HOH A 98 798 159 HOH HOH . 
R 6 HOH A 99 799 145 HOH HOH . 
S 6 HOH B 1 701 26 HOH HOH . 
S 6 HOH B 2 702 32 HOH HOH . 
S 6 HOH B 3 703 141 HOH HOH . 
S 6 HOH B 4 704 9 HOH HOH . 
S 6 HOH B 5 705 98 HOH HOH . 
S 6 HOH B 6 706 45 HOH HOH . 
S 6 HOH B 7 707 72 HOH HOH . 
S 6 HOH B 8 708 117 HOH HOH . 
S 6 HOH B 9 709 135 HOH HOH . 
S 6 HOH B 10 710 78 HOH HOH . 
S 6 HOH B 11 711 132 HOH HOH . 
S 6 HOH B 12 712 138 HOH HOH . 
S 6 HOH B 13 713 103 HOH HOH . 
S 6 HOH B 14 714 115 HOH HOH . 
S 6 HOH B 15 715 38 HOH HOH . 
S 6 HOH B 16 716 134 HOH HOH . 
S 6 HOH B 17 717 133 HOH HOH . 
S 6 HOH B 18 718 62 HOH HOH . 
S 6 HOH B 19 719 76 HOH HOH . 
S 6 HOH B 20 720 97 HOH HOH . 
S 6 HOH B 21 721 29 HOH HOH . 
S 6 HOH B 22 722 131 HOH HOH . 
S 6 HOH B 23 723 150 HOH HOH . 
S 6 HOH B 24 724 24 HOH HOH . 
S 6 HOH B 25 725 170 HOH HOH . 
S 6 HOH B 26 726 50 HOH HOH . 
S 6 HOH B 27 727 37 HOH HOH . 
S 6 HOH B 28 728 157 HOH HOH . 
S 6 HOH B 29 729 6 HOH HOH . 
S 6 HOH B 30 730 166 HOH HOH . 
S 6 HOH B 31 731 75 HOH HOH . 
S 6 HOH B 32 732 129 HOH HOH . 
S 6 HOH B 33 733 120 HOH HOH . 
S 6 HOH B 34 734 139 HOH HOH . 
S 6 HOH B 35 735 47 HOH HOH . 
S 6 HOH B 36 736 19 HOH HOH . 
S 6 HOH B 37 737 86 HOH HOH . 
S 6 HOH B 38 738 174 HOH HOH . 
S 6 HOH B 39 739 33 HOH HOH . 
S 6 HOH B 40 740 109 HOH HOH . 
S 6 HOH B 41 741 151 HOH HOH . 
S 6 HOH B 42 742 155 HOH HOH . 
S 6 HOH B 43 743 167 HOH HOH . 
S 6 HOH B 44 744 65 HOH HOH . 
S 6 HOH B 45 745 55 HOH HOH . 
S 6 HOH B 46 746 7 HOH HOH . 
S 6 HOH B 47 747 94 HOH HOH . 
S 6 HOH B 48 748 51 HOH HOH . 
S 6 HOH B 49 749 148 HOH HOH . 
S 6 HOH B 50 750 142 HOH HOH . 
S 6 HOH B 51 751 88 HOH HOH . 
S 6 HOH B 52 752 146 HOH HOH . 
S 6 HOH B 53 753 81 HOH HOH . 
S 6 HOH B 54 754 143 HOH HOH . 
S 6 HOH B 55 755 182 HOH HOH . 
S 6 HOH B 56 756 180 HOH HOH . 
S 6 HOH B 57 757 175 HOH HOH . 
S 6 HOH B 58 758 58 HOH HOH . 
S 6 HOH B 59 759 60 HOH HOH . 
S 6 HOH B 60 760 179 HOH HOH . 
S 6 HOH B 61 761 153 HOH HOH . 
S 6 HOH B 62 762 176 HOH HOH . 
S 6 HOH B 63 763 11 HOH HOH . 
S 6 HOH B 64 764 169 HOH HOH . 
S 6 HOH B 65 765 82 HOH HOH . 
S 6 HOH B 66 766 110 HOH HOH . 
S 6 HOH B 67 767 95 HOH HOH . 
S 6 HOH B 68 768 102 HOH HOH . 
S 6 HOH B 69 769 118 HOH HOH . 
S 6 HOH B 70 770 164 HOH HOH . 
S 6 HOH B 71 771 90 HOH HOH . 
S 6 HOH B 72 772 183 HOH HOH . 
S 6 HOH B 73 773 85 HOH HOH . 
S 6 HOH B 74 774 100 HOH HOH . 
S 6 HOH B 75 775 147 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . N 5 22.226 43.203 -1.552 1 33.71 ? C1 GOL 604 B 1 
HETATM 2 O O1 GOL . . . N 5 23.165 42.772 -2.471 1 36.27 ? O1 GOL 604 B 1 
HETATM 3 C C2 GOL . . . N 5 21.025 42.235 -1.597 1 35.5 ? C2 GOL 604 B 1 
HETATM 4 O O2 GOL . . . N 5 21.085 41.272 -0.605 1 57.09 ? O2 GOL 604 B 1 
HETATM 5 C C3 GOL . . . N 5 19.805 43.139 -1.437 1 31.13 ? C3 GOL 604 B 1 
HETATM 6 O O3 GOL . . . N 5 18.677 42.336 -1.596 1 47.47 ? O3 GOL 604 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           375 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#