data_7Z6R
#
_model_server_result.job_id            O-9xy820olItT0XPFjgDUg 
_model_server_result.datetime_utc      '2025-07-04 22:59:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z6r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    7Z6R 
#
_exptl.entry_id    7Z6R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.48 
_cell.angle_gamma         90 
_cell.entry_id            7Z6R 
_cell.length_a            102.155 
_cell.length_b            145.525 
_cell.length_c            93.812 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z6R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7Z6R 
_atom_sites.fract_transf_matrix[1][1]    0.009789 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002167 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006872 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010918 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ATP C 1 401 401 ATP ATP . 
F 4 PRP C 1 402 501 PRP PRP . 
G 4 PRP D 1 501 501 PRP PRP . 
H 3 ATP D 1 502 401 ATP ATP . 
I 5 HOH A 1 401 13 HOH HOH . 
I 5 HOH A 2 402 16 HOH HOH . 
I 5 HOH A 3 403 7 HOH HOH . 
I 5 HOH A 4 404 5 HOH HOH . 
I 5 HOH A 5 405 9 HOH HOH . 
I 5 HOH A 6 406 8 HOH HOH . 
I 5 HOH A 7 407 12 HOH HOH . 
I 5 HOH A 8 408 6 HOH HOH . 
J 5 HOH B 1 401 3 HOH HOH . 
J 5 HOH B 2 402 14 HOH HOH . 
J 5 HOH B 3 403 1 HOH HOH . 
J 5 HOH B 4 404 10 HOH HOH . 
K 5 HOH C 1 501 2 HOH HOH . 
K 5 HOH C 2 502 15 HOH HOH . 
K 5 HOH C 3 503 11 HOH HOH . 
L 5 HOH D 1 601 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . E 3 35.363 -7.208 28.628 0.8 111.93 ? PG ATP 401 C 1 
HETATM 2 O O1G ATP . . . E 3 35.054 -8.437 29.451 0.8 109.86 ? O1G ATP 401 C 1 
HETATM 3 O O2G ATP . . . E 3 36.776 -7.209 28.091 0.8 108.61 ? O2G ATP 401 C 1 
HETATM 4 O O3G ATP . . . E 3 35.012 -5.921 29.348 0.8 108.85 ? O3G ATP 401 C 1 
HETATM 5 P PB ATP . . . E 3 33.341 -8.325 26.741 0.8 103.27 ? PB ATP 401 C 1 
HETATM 6 O O1B ATP . . . E 3 31.978 -7.966 27.236 0.8 100.35 ? O1B ATP 401 C 1 
HETATM 7 O O2B ATP . . . E 3 33.573 -8.442 25.271 0.8 103.74 ? O2B ATP 401 C 1 
HETATM 8 O O3B ATP . . . E 3 34.397 -7.272 27.328 0.8 107.04 ? O3B ATP 401 C 1 
HETATM 9 P PA ATP . . . E 3 35.004 -10.732 27.162 0.8 99.05 ? PA ATP 401 C 1 
HETATM 10 O O1A ATP . . . E 3 35.434 -11.38 28.435 0.8 98.02 ? O1A ATP 401 C 1 
HETATM 11 O O2A ATP . . . E 3 36.051 -10.054 26.342 0.8 102.32 ? O2A ATP 401 C 1 
HETATM 12 O O3A ATP . . . E 3 33.824 -9.678 27.456 0.8 103.11 ? O3A ATP 401 C 1 
HETATM 13 O O5' ATP . . . E 3 34.231 -11.807 26.26 0.8 95.59 ? O5' ATP 401 C 1 
HETATM 14 C C5' ATP . . . E 3 33.018 -12.379 26.799 0.8 92.78 ? C5' ATP 401 C 1 
HETATM 15 C C4' ATP . . . E 3 32.609 -13.572 25.971 0.8 90.15 ? C4' ATP 401 C 1 
HETATM 16 O O4' ATP . . . E 3 33.172 -14.772 26.556 0.8 89.09 ? O4' ATP 401 C 1 
HETATM 17 C C3' ATP . . . E 3 31.095 -13.802 25.864 0.8 89.44 ? C3' ATP 401 C 1 
HETATM 18 O O3' ATP . . . E 3 30.678 -13.63 24.516 0.8 89.55 ? O3' ATP 401 C 1 
HETATM 19 C C2' ATP . . . E 3 30.863 -15.24 26.342 0.8 89.34 ? C2' ATP 401 C 1 
HETATM 20 O O2' ATP . . . E 3 30.623 -16.128 25.273 0.8 89.44 ? O2' ATP 401 C 1 
HETATM 21 C C1' ATP . . . E 3 32.157 -15.61 27.06 0.8 90.39 ? C1' ATP 401 C 1 
HETATM 22 N N9 ATP . . . E 3 32.1 -15.463 28.52 0.8 91.85 ? N9 ATP 401 C 1 
HETATM 23 C C8 ATP . . . E 3 31.675 -14.374 29.237 0.8 92.52 ? C8 ATP 401 C 1 
HETATM 24 N N7 ATP . . . E 3 31.746 -14.562 30.535 0.8 92.16 ? N7 ATP 401 C 1 
HETATM 25 C C5 ATP . . . E 3 32.244 -15.85 30.678 0.8 92.75 ? C5 ATP 401 C 1 
HETATM 26 C C6 ATP . . . E 3 32.548 -16.637 31.807 0.8 93.33 ? C6 ATP 401 C 1 
HETATM 27 N N6 ATP . . . E 3 32.385 -16.225 33.061 0.8 92.23 ? N6 ATP 401 C 1 
HETATM 28 N N1 ATP . . . E 3 33.034 -17.883 31.588 0.8 94 ? N1 ATP 401 C 1 
HETATM 29 C C2 ATP . . . E 3 33.194 -18.294 30.323 0.8 93.21 ? C2 ATP 401 C 1 
HETATM 30 N N3 ATP . . . E 3 32.941 -17.643 29.189 0.8 92.76 ? N3 ATP 401 C 1 
HETATM 31 C C4 ATP . . . E 3 32.466 -16.412 29.439 0.8 92.47 ? C4 ATP 401 C 1 
#
_model_server_stats.io_time_ms              125 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           222 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#