data_7Z6U
#
_model_server_result.job_id            uPqBd3AaBc2r6QEHqKq0JQ 
_model_server_result.datetime_utc      '2025-03-05 19:08:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z6u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    7Z6U 
#
_exptl.entry_id    7Z6U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              280.278 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-[(~{E})-(6-azanyl-2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7Z6U 
_cell.length_a            97.797 
_cell.length_b            97.797 
_cell.length_c            80.067 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z6U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    'P 65' 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 260 A SER 260 1_555 A N SEP 261 A SEP 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C SEP 261 A SEP 261 1_555 A N GLU 262 A GLU 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C16 H12 N2 O3' 
_chem_comp.formula_weight    280.278 
_chem_comp.id                IJB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-[(~{E})-(6-azanyl-2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C5 IJB sing 165 n n 
C5 C4 IJB doub 166 n y 
C5 C6 IJB sing 167 n y 
C4 C3 IJB sing 168 n y 
C6 C7 IJB doub 169 n y 
C3 N IJB sing 170 n n 
C3 C2 IJB doub 171 n y 
N C IJB sing 172 n n 
C7 C2 IJB sing 173 n y 
C2 C1 IJB sing 174 n n 
C C1 IJB sing 175 n n 
C O IJB doub 176 n n 
C1 C8 IJB doub 177 e n 
C15 C14 IJB doub 178 n y 
C15 C9 IJB sing 179 n y 
C8 C9 IJB sing 180 n n 
C14 C12 IJB sing 181 n y 
C9 C10 IJB doub 182 n y 
O2 C13 IJB doub 183 n n 
C12 C13 IJB sing 184 n n 
C12 C11 IJB doub 185 n y 
C10 C11 IJB sing 186 n y 
C13 O1 IJB sing 187 n n 
C4 H1 IJB sing 188 n n 
C6 H2 IJB sing 189 n n 
C7 H3 IJB sing 190 n n 
C8 H4 IJB sing 191 n n 
C10 H5 IJB sing 192 n n 
C11 H6 IJB sing 193 n n 
C14 H7 IJB sing 194 n n 
C15 H8 IJB sing 195 n n 
O1 H9 IJB sing 196 n n 
N1 H10 IJB sing 197 n n 
N1 H11 IJB sing 198 n n 
N H12 IJB sing 199 n n 
#
_atom_sites.entry_id                     7Z6U 
_atom_sites.fract_transf_matrix[1][1]    0.010225 
_atom_sites.fract_transf_matrix[1][2]    0.005904 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011807 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01249 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 401 1 GOL GOL . 
D 4 IJB A 1 402 1 IJB 555 . 
E 5 HOH A 1 501 28 HOH HOH . 
E 5 HOH A 2 502 24 HOH HOH . 
E 5 HOH A 3 503 17 HOH HOH . 
E 5 HOH A 4 504 48 HOH HOH . 
E 5 HOH A 5 505 53 HOH HOH . 
E 5 HOH A 6 506 43 HOH HOH . 
E 5 HOH A 7 507 25 HOH HOH . 
E 5 HOH A 8 508 45 HOH HOH . 
E 5 HOH A 9 509 3 HOH HOH . 
E 5 HOH A 10 510 61 HOH HOH . 
E 5 HOH A 11 511 29 HOH HOH . 
E 5 HOH A 12 512 34 HOH HOH . 
E 5 HOH A 13 513 4 HOH HOH . 
E 5 HOH A 14 514 6 HOH HOH . 
E 5 HOH A 15 515 41 HOH HOH . 
E 5 HOH A 16 516 2 HOH HOH . 
E 5 HOH A 17 517 40 HOH HOH . 
E 5 HOH A 18 518 104 HOH HOH . 
E 5 HOH A 19 519 20 HOH HOH . 
E 5 HOH A 20 520 100 HOH HOH . 
E 5 HOH A 21 521 23 HOH HOH . 
E 5 HOH A 22 522 90 HOH HOH . 
E 5 HOH A 23 523 42 HOH HOH . 
E 5 HOH A 24 524 36 HOH HOH . 
E 5 HOH A 25 525 96 HOH HOH . 
E 5 HOH A 26 526 74 HOH HOH . 
E 5 HOH A 27 527 91 HOH HOH . 
E 5 HOH A 28 528 33 HOH HOH . 
E 5 HOH A 29 529 15 HOH HOH . 
E 5 HOH A 30 530 88 HOH HOH . 
E 5 HOH A 31 531 78 HOH HOH . 
E 5 HOH A 32 532 105 HOH HOH . 
E 5 HOH A 33 533 44 HOH HOH . 
E 5 HOH A 34 534 70 HOH HOH . 
E 5 HOH A 35 535 86 HOH HOH . 
E 5 HOH A 36 536 9 HOH HOH . 
E 5 HOH A 37 537 19 HOH HOH . 
E 5 HOH A 38 538 58 HOH HOH . 
E 5 HOH A 39 539 67 HOH HOH . 
E 5 HOH A 40 540 101 HOH HOH . 
E 5 HOH A 41 541 56 HOH HOH . 
E 5 HOH A 42 542 7 HOH HOH . 
E 5 HOH A 43 543 75 HOH HOH . 
E 5 HOH A 44 544 98 HOH HOH . 
E 5 HOH A 45 545 51 HOH HOH . 
E 5 HOH A 46 546 11 HOH HOH . 
E 5 HOH A 47 547 106 HOH HOH . 
E 5 HOH A 48 548 92 HOH HOH . 
E 5 HOH A 49 549 83 HOH HOH . 
E 5 HOH A 50 550 5 HOH HOH . 
E 5 HOH A 51 551 16 HOH HOH . 
E 5 HOH A 52 552 1 HOH HOH . 
E 5 HOH A 53 553 12 HOH HOH . 
E 5 HOH A 54 554 49 HOH HOH . 
E 5 HOH A 55 555 8 HOH HOH . 
E 5 HOH A 56 556 64 HOH HOH . 
E 5 HOH A 57 557 81 HOH HOH . 
E 5 HOH A 58 558 107 HOH HOH . 
E 5 HOH A 59 559 77 HOH HOH . 
E 5 HOH A 60 560 84 HOH HOH . 
E 5 HOH A 61 561 26 HOH HOH . 
E 5 HOH A 62 562 47 HOH HOH . 
E 5 HOH A 63 563 102 HOH HOH . 
E 5 HOH A 64 564 99 HOH HOH . 
E 5 HOH A 65 565 87 HOH HOH . 
E 5 HOH A 66 566 10 HOH HOH . 
E 5 HOH A 67 567 82 HOH HOH . 
E 5 HOH A 68 568 57 HOH HOH . 
E 5 HOH A 69 569 35 HOH HOH . 
E 5 HOH A 70 570 37 HOH HOH . 
E 5 HOH A 71 571 108 HOH HOH . 
E 5 HOH A 72 572 21 HOH HOH . 
E 5 HOH A 73 573 46 HOH HOH . 
E 5 HOH A 74 574 30 HOH HOH . 
E 5 HOH A 75 575 55 HOH HOH . 
E 5 HOH A 76 576 31 HOH HOH . 
E 5 HOH A 77 577 59 HOH HOH . 
E 5 HOH A 78 578 94 HOH HOH . 
E 5 HOH A 79 579 14 HOH HOH . 
E 5 HOH A 80 580 89 HOH HOH . 
E 5 HOH A 81 581 13 HOH HOH . 
E 5 HOH A 82 582 54 HOH HOH . 
E 5 HOH A 83 583 22 HOH HOH . 
E 5 HOH A 84 584 103 HOH HOH . 
E 5 HOH A 85 585 93 HOH HOH . 
E 5 HOH A 86 586 73 HOH HOH . 
E 5 HOH A 87 587 39 HOH HOH . 
E 5 HOH A 88 588 38 HOH HOH . 
E 5 HOH A 89 589 80 HOH HOH . 
E 5 HOH A 90 590 97 HOH HOH . 
F 5 HOH D 1 101 95 HOH HOH . 
F 5 HOH D 2 102 63 HOH HOH . 
F 5 HOH D 3 103 62 HOH HOH . 
F 5 HOH D 4 104 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IJB . . . D 4 120.901 207.005 -4.061 0.97 37.17 ? C1 IJB 402 A 1 
HETATM 2 C C2 IJB . . . D 4 121.13 206.277 -5.302 0.97 44.1 ? C2 IJB 402 A 1 
HETATM 3 C C3 IJB . . . D 4 121.383 207.239 -6.3 0.97 44.15 ? C3 IJB 402 A 1 
HETATM 4 C C4 IJB . . . D 4 121.679 206.876 -7.611 0.97 42.08 ? C4 IJB 402 A 1 
HETATM 5 C C5 IJB . . . D 4 121.753 205.522 -7.942 0.97 44.66 ? C5 IJB 402 A 1 
HETATM 6 C C6 IJB . . . D 4 121.488 204.56 -6.951 0.97 40.08 ? C6 IJB 402 A 1 
HETATM 7 C C7 IJB . . . D 4 121.181 204.931 -5.652 0.97 40.62 ? C7 IJB 402 A 1 
HETATM 8 C C8 IJB . . . D 4 120.587 206.68 -2.796 0.97 40.15 ? C8 IJB 402 A 1 
HETATM 9 C C9 IJB . . . D 4 120.357 205.363 -2.19 0.97 33 ? C9 IJB 402 A 1 
HETATM 10 C C10 IJB . . . D 4 120.855 205.043 -0.926 0.97 33.18 ? C10 IJB 402 A 1 
HETATM 11 C C11 IJB . . . D 4 120.631 203.799 -0.36 0.97 33.23 ? C11 IJB 402 A 1 
HETATM 12 C C12 IJB . . . D 4 119.907 202.829 -1.042 0.97 36.53 ? C12 IJB 402 A 1 
HETATM 13 C C13 IJB . . . D 4 119.733 201.464 -0.47 0.97 39.45 ? C13 IJB 402 A 1 
HETATM 14 C C14 IJB . . . D 4 119.402 203.14 -2.3 0.97 43.4 ? C14 IJB 402 A 1 
HETATM 15 C C15 IJB . . . D 4 119.626 204.385 -2.863 0.97 33.18 ? C15 IJB 402 A 1 
HETATM 16 O O1 IJB . . . D 4 120.327 201.276 0.684 0.97 34.94 ? O1 IJB 402 A 1 
HETATM 17 N N1 IJB . . . D 4 122.151 205.128 -9.228 0.97 40.43 ? N1 IJB 402 A 1 
HETATM 18 O O2 IJB . . . D 4 119.075 200.595 -1.05 0.97 38.34 ? O2 IJB 402 A 1 
HETATM 19 N N IJB . . . D 4 121.333 208.513 -5.742 0.97 40.48 ? N IJB 402 A 1 
HETATM 20 C C IJB . . . D 4 121.065 208.454 -4.417 0.97 43.18 ? C IJB 402 A 1 
HETATM 21 O O IJB . . . D 4 121.009 209.42 -3.654 0.97 50.09 ? O IJB 402 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           21 
#