data_7Z75
#
_model_server_result.job_id            e1sZz120pHUzR9RdoS5U_A 
_model_server_result.datetime_utc      '2024-11-29 09:29:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z75 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1102}' 
#
_entry.id    7Z75 
#
_exptl.entry_id    7Z75 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7Z75 
_cell.length_a            56.064 
_cell.length_b            134.412 
_cell.length_c            152.679 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z75 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7Z75 
_atom_sites.fract_transf_matrix[1][1]    0.017837 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00744 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00655 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IG3 A 1 1101 1007 IG3 LIG . 
C 3 EDO A 1 1102 1008 EDO EDO . 
D 4 SO4 A 1 1103 1009 SO4 SO4 . 
E 5 HOH A 1 1201 1016 HOH HOH . 
E 5 HOH A 2 1202 1057 HOH HOH . 
E 5 HOH A 3 1203 1056 HOH HOH . 
E 5 HOH A 4 1204 1052 HOH HOH . 
E 5 HOH A 5 1205 1024 HOH HOH . 
E 5 HOH A 6 1206 1070 HOH HOH . 
E 5 HOH A 7 1207 1021 HOH HOH . 
E 5 HOH A 8 1208 1071 HOH HOH . 
E 5 HOH A 9 1209 1030 HOH HOH . 
E 5 HOH A 10 1210 1025 HOH HOH . 
E 5 HOH A 11 1211 1020 HOH HOH . 
E 5 HOH A 12 1212 1049 HOH HOH . 
E 5 HOH A 13 1213 1013 HOH HOH . 
E 5 HOH A 14 1214 1028 HOH HOH . 
E 5 HOH A 15 1215 1012 HOH HOH . 
E 5 HOH A 16 1216 1069 HOH HOH . 
E 5 HOH A 17 1217 1033 HOH HOH . 
E 5 HOH A 18 1218 1015 HOH HOH . 
E 5 HOH A 19 1219 1048 HOH HOH . 
E 5 HOH A 20 1220 1060 HOH HOH . 
E 5 HOH A 21 1221 1026 HOH HOH . 
E 5 HOH A 22 1222 1010 HOH HOH . 
E 5 HOH A 23 1223 1042 HOH HOH . 
E 5 HOH A 24 1224 1046 HOH HOH . 
E 5 HOH A 25 1225 1023 HOH HOH . 
E 5 HOH A 26 1226 1018 HOH HOH . 
E 5 HOH A 27 1227 1019 HOH HOH . 
E 5 HOH A 28 1228 1051 HOH HOH . 
E 5 HOH A 29 1229 1014 HOH HOH . 
E 5 HOH A 30 1230 1044 HOH HOH . 
E 5 HOH A 31 1231 1034 HOH HOH . 
E 5 HOH A 32 1232 1063 HOH HOH . 
E 5 HOH A 33 1233 1011 HOH HOH . 
E 5 HOH A 34 1234 1045 HOH HOH . 
E 5 HOH A 35 1235 1032 HOH HOH . 
E 5 HOH A 36 1236 1029 HOH HOH . 
E 5 HOH A 37 1237 1055 HOH HOH . 
E 5 HOH A 38 1238 1059 HOH HOH . 
E 5 HOH A 39 1239 1017 HOH HOH . 
E 5 HOH A 40 1240 1031 HOH HOH . 
E 5 HOH A 41 1241 1062 HOH HOH . 
E 5 HOH A 42 1242 1068 HOH HOH . 
E 5 HOH A 43 1243 1037 HOH HOH . 
E 5 HOH A 44 1244 1022 HOH HOH . 
E 5 HOH A 45 1245 1041 HOH HOH . 
E 5 HOH A 46 1246 1067 HOH HOH . 
E 5 HOH A 47 1247 1058 HOH HOH . 
E 5 HOH A 48 1248 1054 HOH HOH . 
E 5 HOH A 49 1249 1072 HOH HOH . 
E 5 HOH A 50 1250 1038 HOH HOH . 
E 5 HOH A 51 1251 1047 HOH HOH . 
E 5 HOH A 52 1252 1066 HOH HOH . 
E 5 HOH A 53 1253 1027 HOH HOH . 
E 5 HOH A 54 1254 1035 HOH HOH . 
E 5 HOH A 55 1255 1039 HOH HOH . 
E 5 HOH A 56 1256 1050 HOH HOH . 
E 5 HOH A 57 1257 1064 HOH HOH . 
E 5 HOH A 58 1258 1061 HOH HOH . 
E 5 HOH A 59 1259 1053 HOH HOH . 
E 5 HOH A 60 1260 1043 HOH HOH . 
E 5 HOH A 61 1261 1036 HOH HOH . 
E 5 HOH A 62 1262 1065 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 4.686 -1.942 -15.005 1 101.83 ? C1 EDO 1102 A 1 
HETATM 2 O O1 EDO . . . C 3 4.56 -1.632 -16.41 1 101.75 ? O1 EDO 1102 A 1 
HETATM 3 C C2 EDO . . . C 3 3.575 -2.821 -14.513 1 104.33 ? C2 EDO 1102 A 1 
HETATM 4 O O2 EDO . . . C 3 2.265 -2.478 -15.033 1 98.02 ? O2 EDO 1102 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#