data_7Z7B # _model_server_result.job_id 3rxBsAQ78aDrOymzX5EXyw _model_server_result.datetime_utc '2024-11-17 02:34:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z7b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":603}' # _entry.id 7Z7B # _exptl.entry_id 7Z7B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7Z7B _cell.length_a 80.38 _cell.length_b 80.38 _cell.length_c 113.44 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z7B _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,P 1 1 B,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7Z7B _atom_sites.fract_transf_matrix[1][1] 0.012441 _atom_sites.fract_transf_matrix[1][2] 0.007183 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014366 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008815 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 601 1 SO4 SO4 . D 2 SO4 A 1 602 2 SO4 SO4 . E 2 SO4 A 1 603 4 SO4 SO4 . F 2 SO4 A 1 604 5 SO4 SO4 . G 3 CL A 1 605 6 CL CL . H 3 CL A 1 606 7 CL CL . I 4 OYK A 1 607 10 OYK LIG . J 2 SO4 A 1 608 11 SO4 SO4 . K 3 CL A 1 609 13 CL CL . L 2 SO4 B 1 601 3 SO4 SO4 . M 4 OYK B 1 602 8 OYK LIG . N 5 GOL B 1 603 9 GOL GOL . O 3 CL B 1 604 12 CL CL . P 6 HOH A 1 701 157 HOH HOH . P 6 HOH A 2 702 188 HOH HOH . P 6 HOH A 3 703 37 HOH HOH . P 6 HOH A 4 704 63 HOH HOH . P 6 HOH A 5 705 9 HOH HOH . P 6 HOH A 6 706 150 HOH HOH . P 6 HOH A 7 707 73 HOH HOH . P 6 HOH A 8 708 41 HOH HOH . P 6 HOH A 9 709 45 HOH HOH . P 6 HOH A 10 710 5 HOH HOH . P 6 HOH A 11 711 83 HOH HOH . P 6 HOH A 12 712 14 HOH HOH . P 6 HOH A 13 713 175 HOH HOH . P 6 HOH A 14 714 49 HOH HOH . P 6 HOH A 15 715 55 HOH HOH . P 6 HOH A 16 716 140 HOH HOH . P 6 HOH A 17 717 11 HOH HOH . P 6 HOH A 18 718 15 HOH HOH . P 6 HOH A 19 719 200 HOH HOH . P 6 HOH A 20 720 21 HOH HOH . P 6 HOH A 21 721 53 HOH HOH . P 6 HOH A 22 722 40 HOH HOH . P 6 HOH A 23 723 8 HOH HOH . P 6 HOH A 24 724 6 HOH HOH . P 6 HOH A 25 725 57 HOH HOH . P 6 HOH A 26 726 103 HOH HOH . P 6 HOH A 27 727 127 HOH HOH . P 6 HOH A 28 728 30 HOH HOH . P 6 HOH A 29 729 25 HOH HOH . P 6 HOH A 30 730 28 HOH HOH . P 6 HOH A 31 731 46 HOH HOH . P 6 HOH A 32 732 44 HOH HOH . P 6 HOH A 33 733 4 HOH HOH . P 6 HOH A 34 734 27 HOH HOH . P 6 HOH A 35 735 133 HOH HOH . P 6 HOH A 36 736 39 HOH HOH . P 6 HOH A 37 737 75 HOH HOH . P 6 HOH A 38 738 35 HOH HOH . P 6 HOH A 39 739 13 HOH HOH . P 6 HOH A 40 740 20 HOH HOH . P 6 HOH A 41 741 23 HOH HOH . P 6 HOH A 42 742 22 HOH HOH . P 6 HOH A 43 743 2 HOH HOH . P 6 HOH A 44 744 163 HOH HOH . P 6 HOH A 45 745 96 HOH HOH . P 6 HOH A 46 746 151 HOH HOH . P 6 HOH A 47 747 80 HOH HOH . P 6 HOH A 48 748 56 HOH HOH . P 6 HOH A 49 749 77 HOH HOH . P 6 HOH A 50 750 19 HOH HOH . P 6 HOH A 51 751 16 HOH HOH . P 6 HOH A 52 752 95 HOH HOH . P 6 HOH A 53 753 36 HOH HOH . P 6 HOH A 54 754 66 HOH HOH . P 6 HOH A 55 755 84 HOH HOH . P 6 HOH A 56 756 145 HOH HOH . P 6 HOH A 57 757 205 HOH HOH . P 6 HOH A 58 758 208 HOH HOH . P 6 HOH A 59 759 17 HOH HOH . P 6 HOH A 60 760 32 HOH HOH . P 6 HOH A 61 761 48 HOH HOH . P 6 HOH A 62 762 52 HOH HOH . P 6 HOH A 63 763 113 HOH HOH . P 6 HOH A 64 764 168 HOH HOH . P 6 HOH A 65 765 112 HOH HOH . P 6 HOH A 66 766 59 HOH HOH . P 6 HOH A 67 767 24 HOH HOH . P 6 HOH A 68 768 71 HOH HOH . P 6 HOH A 69 769 160 HOH HOH . P 6 HOH A 70 770 38 HOH HOH . P 6 HOH A 71 771 209 HOH HOH . P 6 HOH A 72 772 111 HOH HOH . P 6 HOH A 73 773 155 HOH HOH . P 6 HOH A 74 774 179 HOH HOH . P 6 HOH A 75 775 51 HOH HOH . P 6 HOH A 76 776 181 HOH HOH . P 6 HOH A 77 777 78 HOH HOH . P 6 HOH A 78 778 100 HOH HOH . P 6 HOH A 79 779 152 HOH HOH . P 6 HOH A 80 780 58 HOH HOH . P 6 HOH A 81 781 105 HOH HOH . P 6 HOH A 82 782 34 HOH HOH . P 6 HOH A 83 783 79 HOH HOH . P 6 HOH A 84 784 92 HOH HOH . P 6 HOH A 85 785 65 HOH HOH . P 6 HOH A 86 786 101 HOH HOH . P 6 HOH A 87 787 138 HOH HOH . P 6 HOH A 88 788 114 HOH HOH . P 6 HOH A 89 789 70 HOH HOH . P 6 HOH A 90 790 86 HOH HOH . P 6 HOH A 91 791 197 HOH HOH . P 6 HOH A 92 792 201 HOH HOH . P 6 HOH A 93 793 194 HOH HOH . P 6 HOH A 94 794 110 HOH HOH . P 6 HOH A 95 795 141 HOH HOH . P 6 HOH A 96 796 173 HOH HOH . P 6 HOH A 97 797 68 HOH HOH . P 6 HOH A 98 798 62 HOH HOH . P 6 HOH A 99 799 130 HOH HOH . P 6 HOH A 100 800 3 HOH HOH . P 6 HOH A 101 801 172 HOH HOH . P 6 HOH A 102 802 137 HOH HOH . P 6 HOH A 103 803 203 HOH HOH . P 6 HOH A 104 804 186 HOH HOH . P 6 HOH A 105 805 142 HOH HOH . P 6 HOH A 106 806 139 HOH HOH . P 6 HOH A 107 807 169 HOH HOH . P 6 HOH A 108 808 176 HOH HOH . P 6 HOH A 109 809 132 HOH HOH . P 6 HOH A 110 810 116 HOH HOH . P 6 HOH A 111 811 171 HOH HOH . Q 6 HOH B 1 701 89 HOH HOH . Q 6 HOH B 2 702 119 HOH HOH . Q 6 HOH B 3 703 109 HOH HOH . Q 6 HOH B 4 704 31 HOH HOH . Q 6 HOH B 5 705 74 HOH HOH . Q 6 HOH B 6 706 199 HOH HOH . Q 6 HOH B 7 707 50 HOH HOH . Q 6 HOH B 8 708 18 HOH HOH . Q 6 HOH B 9 709 134 HOH HOH . Q 6 HOH B 10 710 43 HOH HOH . Q 6 HOH B 11 711 42 HOH HOH . Q 6 HOH B 12 712 97 HOH HOH . Q 6 HOH B 13 713 153 HOH HOH . Q 6 HOH B 14 714 93 HOH HOH . Q 6 HOH B 15 715 82 HOH HOH . Q 6 HOH B 16 716 198 HOH HOH . Q 6 HOH B 17 717 10 HOH HOH . Q 6 HOH B 18 718 47 HOH HOH . Q 6 HOH B 19 719 144 HOH HOH . Q 6 HOH B 20 720 107 HOH HOH . Q 6 HOH B 21 721 147 HOH HOH . Q 6 HOH B 22 722 69 HOH HOH . Q 6 HOH B 23 723 183 HOH HOH . Q 6 HOH B 24 724 81 HOH HOH . Q 6 HOH B 25 725 26 HOH HOH . Q 6 HOH B 26 726 7 HOH HOH . Q 6 HOH B 27 727 94 HOH HOH . Q 6 HOH B 28 728 124 HOH HOH . Q 6 HOH B 29 729 170 HOH HOH . Q 6 HOH B 30 730 154 HOH HOH . Q 6 HOH B 31 731 146 HOH HOH . Q 6 HOH B 32 732 162 HOH HOH . Q 6 HOH B 33 733 190 HOH HOH . Q 6 HOH B 34 734 180 HOH HOH . Q 6 HOH B 35 735 61 HOH HOH . Q 6 HOH B 36 736 12 HOH HOH . Q 6 HOH B 37 737 206 HOH HOH . Q 6 HOH B 38 738 125 HOH HOH . Q 6 HOH B 39 739 60 HOH HOH . Q 6 HOH B 40 740 204 HOH HOH . Q 6 HOH B 41 741 85 HOH HOH . Q 6 HOH B 42 742 182 HOH HOH . Q 6 HOH B 43 743 90 HOH HOH . Q 6 HOH B 44 744 121 HOH HOH . Q 6 HOH B 45 745 54 HOH HOH . Q 6 HOH B 46 746 165 HOH HOH . Q 6 HOH B 47 747 123 HOH HOH . Q 6 HOH B 48 748 67 HOH HOH . Q 6 HOH B 49 749 149 HOH HOH . Q 6 HOH B 50 750 161 HOH HOH . Q 6 HOH B 51 751 122 HOH HOH . Q 6 HOH B 52 752 102 HOH HOH . Q 6 HOH B 53 753 108 HOH HOH . Q 6 HOH B 54 754 29 HOH HOH . Q 6 HOH B 55 755 76 HOH HOH . Q 6 HOH B 56 756 159 HOH HOH . Q 6 HOH B 57 757 185 HOH HOH . Q 6 HOH B 58 758 131 HOH HOH . Q 6 HOH B 59 759 207 HOH HOH . Q 6 HOH B 60 760 98 HOH HOH . Q 6 HOH B 61 761 117 HOH HOH . Q 6 HOH B 62 762 148 HOH HOH . Q 6 HOH B 63 763 64 HOH HOH . Q 6 HOH B 64 764 177 HOH HOH . Q 6 HOH B 65 765 87 HOH HOH . Q 6 HOH B 66 766 178 HOH HOH . Q 6 HOH B 67 767 72 HOH HOH . Q 6 HOH B 68 768 115 HOH HOH . Q 6 HOH B 69 769 174 HOH HOH . Q 6 HOH B 70 770 129 HOH HOH . Q 6 HOH B 71 771 91 HOH HOH . Q 6 HOH B 72 772 126 HOH HOH . Q 6 HOH B 73 773 118 HOH HOH . Q 6 HOH B 74 774 106 HOH HOH . Q 6 HOH B 75 775 184 HOH HOH . Q 6 HOH B 76 776 202 HOH HOH . Q 6 HOH B 77 777 193 HOH HOH . Q 6 HOH B 78 778 88 HOH HOH . Q 6 HOH B 79 779 167 HOH HOH . Q 6 HOH B 80 780 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 5 27.09 -38.747 -2.85 1 29.11 ? C1 GOL 603 B 1 HETATM 2 O O1 GOL . . . N 5 26.936 -37.383 -3.103 1 38.35 ? O1 GOL 603 B 1 HETATM 3 C C2 GOL . . . N 5 25.683 -39.396 -2.712 1 28.19 ? C2 GOL 603 B 1 HETATM 4 O O2 GOL . . . N 5 24.675 -38.629 -3.274 1 37.56 ? O2 GOL 603 B 1 HETATM 5 C C3 GOL . . . N 5 25.811 -40.758 -3.386 1 25.48 ? C3 GOL 603 B 1 HETATM 6 O O3 GOL . . . N 5 24.85 -41.564 -2.843 1 35.28 ? O3 GOL 603 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #