data_7Z7H # _model_server_result.job_id jwBiMbM9dMdBt4sIED75QQ _model_server_result.datetime_utc '2024-10-25 20:25:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7z7h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":300}' # _entry.id 7Z7H # _exptl.entry_id 7Z7H _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 122.125 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Z7H _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Z7H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 74 D GLU 72 1_555 A N HIC 75 D HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C HIC 75 D HIC 73 1_555 A N GLY 76 D GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 A OG1 THR 150 D THR 148 1_555 I C1D APR . D APR 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? covale ? covale4 C C GLU 74 B GLU 72 1_555 C N HIC 75 B HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 C C HIC 75 B HIC 73 1_555 C N GLY 76 B GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 D C GLU 74 E GLU 72 1_555 D N HIC 75 E HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 D C HIC 75 E HIC 73 1_555 D N GLY 76 E GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 E C GLU 74 C GLU 72 1_555 E N HIC 75 C HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 E C HIC 75 C HIC 73 1_555 E N GLY 76 C GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale10 F C GLU 74 A GLU 72 1_555 F N HIC 75 A HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale11 F C HIC 75 A HIC 73 1_555 F N GLY 76 A GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? metalc ? metalc1 G O1B ADP . D ADP 401 1_555 H MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.777 ? metalc ? metalc2 G O1A ADP . D ADP 401 1_555 H MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? metalc ? metalc3 G O3A ADP . D ADP 401 1_555 H MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc4 K O1B ADP . B ADP 401 1_555 L MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.829 ? metalc ? metalc5 K O3B ADP . B ADP 401 1_555 L MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc6 K O1A ADP . B ADP 401 1_555 L MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc7 K O3A ADP . B ADP 401 1_555 L MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? metalc ? metalc8 M O1B ADP . E ADP 401 1_555 N MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc9 M O3B ADP . E ADP 401 1_555 N MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc10 M O3A ADP . E ADP 401 1_555 N MG MG . E MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc11 O O1B ADP . C ADP 401 1_555 P MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc12 O O3B ADP . C ADP 401 1_555 P MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc13 O O3A ADP . C ADP 401 1_555 P MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc14 Q O1B ADP . A ADP 401 1_555 R MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc15 Q O3B ADP . A ADP 401 1_555 R MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc16 Q O3A ADP . A ADP 401 1_555 R MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? # _chem_comp.formula 'C6 H6 N2 O' _chem_comp.formula_weight 122.125 _chem_comp.id NCA _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7Z7H _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 ADP D 1 401 401 ADP ADP . H 4 MG D 1 402 402 MG MG . I 5 APR D 1 403 403 APR AR6 . J 6 NCA F 1 300 300 NCA LIG . K 3 ADP B 1 401 401 ADP ADP . L 4 MG B 1 402 402 MG MG . M 3 ADP E 1 401 401 ADP ADP . N 4 MG E 1 402 402 MG MG . O 3 ADP C 1 401 401 ADP ADP . P 4 MG C 1 402 402 MG MG . Q 3 ADP A 1 401 401 ADP ADP . R 4 MG A 1 402 402 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NCA . . . J 6 112.201 149.784 148.549 1 20 ? N1 NCA 300 F 1 HETATM 2 C C2 NCA . . . J 6 112.186 151.067 148.029 1 20 ? C2 NCA 300 F 1 HETATM 3 C C3 NCA . . . J 6 111.478 152.136 148.719 1 20 ? C3 NCA 300 F 1 HETATM 4 C C4 NCA . . . J 6 110.78 151.847 149.964 1 20 ? C4 NCA 300 F 1 HETATM 5 C C5 NCA . . . J 6 110.826 150.48 150.466 1 20 ? C5 NCA 300 F 1 HETATM 6 C C6 NCA . . . J 6 111.553 149.459 149.729 1 20 ? C6 NCA 300 F 1 HETATM 7 C C7 NCA . . . J 6 111.452 153.615 148.104 1 20 ? C7 NCA 300 F 1 HETATM 8 O O7 NCA . . . J 6 110.834 154.522 148.689 1 20 ? O7 NCA 300 F 1 HETATM 9 N N7 NCA . . . J 6 112.171 153.907 146.791 1 20 ? N7 NCA 300 F 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #