data_7Z92
#
_model_server_result.job_id            fONeQNshEL5bsj_L8e9H8g 
_model_server_result.datetime_utc      '2024-11-27 19:54:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z92 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":604}' 
#
_entry.id    7Z92 
#
_exptl.entry_id    7Z92 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              155.155 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-azanyl-3,6-dimethyl-1H-pyrimidine-2,4-dione 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7Z92 
_cell.length_a            80.12 
_cell.length_b            80.12 
_cell.length_c            113.85 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z92 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    'P 65' 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,J 1 1 
B,F,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 I N N 
#
_chem_comp.formula           'C6 H9 N3 O2' 
_chem_comp.formula_weight    155.155 
_chem_comp.id                IGT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-azanyl-3,6-dimethyl-1H-pyrimidine-2,4-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C07 C06 IGT sing 152 n n 
N05 C03 IGT sing 153 n n 
N05 C06 IGT sing 154 n n 
O04 C03 IGT doub 155 n n 
C03 N02 IGT sing 156 n n 
C06 C08 IGT doub 157 n n 
C08 N09 IGT sing 158 n n 
C08 C10 IGT sing 159 n n 
N02 C01 IGT sing 160 n n 
N02 C10 IGT sing 161 n n 
C10 O11 IGT doub 162 n n 
C01 H1 IGT sing 163 n n 
C01 H2 IGT sing 164 n n 
C01 H3 IGT sing 165 n n 
C07 H4 IGT sing 166 n n 
C07 H5 IGT sing 167 n n 
C07 H6 IGT sing 168 n n 
N09 H8 IGT sing 169 n n 
N09 H9 IGT sing 170 n n 
N05 H7 IGT sing 171 n n 
#
_atom_sites.entry_id                     7Z92 
_atom_sites.fract_transf_matrix[1][1]    0.012481 
_atom_sites.fract_transf_matrix[1][2]    0.007206 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014412 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008783 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 601 1 SO4 SO4 . 
D 2 SO4 A 1 602 3 SO4 SO4 . 
E 3 IGT A 1 603 6 IGT LIG . 
F 2 SO4 B 1 601 2 SO4 SO4 . 
G 2 SO4 B 1 602 4 SO4 SO4 . 
H 2 SO4 B 1 603 5 SO4 SO4 . 
I 3 IGT B 1 604 7 IGT LIG . 
J 4 HOH A 1 701 32 HOH HOH . 
J 4 HOH A 2 702 24 HOH HOH . 
J 4 HOH A 3 703 91 HOH HOH . 
J 4 HOH A 4 704 63 HOH HOH . 
J 4 HOH A 5 705 71 HOH HOH . 
J 4 HOH A 6 706 23 HOH HOH . 
J 4 HOH A 7 707 84 HOH HOH . 
J 4 HOH A 8 708 31 HOH HOH . 
J 4 HOH A 9 709 52 HOH HOH . 
J 4 HOH A 10 710 96 HOH HOH . 
J 4 HOH A 11 711 48 HOH HOH . 
J 4 HOH A 12 712 9 HOH HOH . 
J 4 HOH A 13 713 7 HOH HOH . 
J 4 HOH A 14 714 27 HOH HOH . 
J 4 HOH A 15 715 21 HOH HOH . 
J 4 HOH A 16 716 97 HOH HOH . 
J 4 HOH A 17 717 33 HOH HOH . 
J 4 HOH A 18 718 36 HOH HOH . 
J 4 HOH A 19 719 20 HOH HOH . 
J 4 HOH A 20 720 54 HOH HOH . 
J 4 HOH A 21 721 16 HOH HOH . 
J 4 HOH A 22 722 46 HOH HOH . 
J 4 HOH A 23 723 59 HOH HOH . 
J 4 HOH A 24 724 41 HOH HOH . 
J 4 HOH A 25 725 81 HOH HOH . 
J 4 HOH A 26 726 1 HOH HOH . 
J 4 HOH A 27 727 69 HOH HOH . 
J 4 HOH A 28 728 57 HOH HOH . 
J 4 HOH A 29 729 29 HOH HOH . 
J 4 HOH A 30 730 37 HOH HOH . 
J 4 HOH A 31 731 28 HOH HOH . 
J 4 HOH A 32 732 55 HOH HOH . 
J 4 HOH A 33 733 40 HOH HOH . 
J 4 HOH A 34 734 68 HOH HOH . 
J 4 HOH A 35 735 53 HOH HOH . 
J 4 HOH A 36 736 60 HOH HOH . 
J 4 HOH A 37 737 79 HOH HOH . 
J 4 HOH A 38 738 93 HOH HOH . 
J 4 HOH A 39 739 83 HOH HOH . 
J 4 HOH A 40 740 76 HOH HOH . 
J 4 HOH A 41 741 4 HOH HOH . 
J 4 HOH A 42 742 2 HOH HOH . 
J 4 HOH A 43 743 80 HOH HOH . 
J 4 HOH A 44 744 64 HOH HOH . 
J 4 HOH A 45 745 99 HOH HOH . 
J 4 HOH A 46 746 66 HOH HOH . 
J 4 HOH A 47 747 39 HOH HOH . 
J 4 HOH A 48 748 42 HOH HOH . 
K 4 HOH B 1 701 90 HOH HOH . 
K 4 HOH B 2 702 62 HOH HOH . 
K 4 HOH B 3 703 85 HOH HOH . 
K 4 HOH B 4 704 72 HOH HOH . 
K 4 HOH B 5 705 61 HOH HOH . 
K 4 HOH B 6 706 44 HOH HOH . 
K 4 HOH B 7 707 45 HOH HOH . 
K 4 HOH B 8 708 6 HOH HOH . 
K 4 HOH B 9 709 49 HOH HOH . 
K 4 HOH B 10 710 10 HOH HOH . 
K 4 HOH B 11 711 58 HOH HOH . 
K 4 HOH B 12 712 34 HOH HOH . 
K 4 HOH B 13 713 18 HOH HOH . 
K 4 HOH B 14 714 47 HOH HOH . 
K 4 HOH B 15 715 56 HOH HOH . 
K 4 HOH B 16 716 14 HOH HOH . 
K 4 HOH B 17 717 95 HOH HOH . 
K 4 HOH B 18 718 51 HOH HOH . 
K 4 HOH B 19 719 30 HOH HOH . 
K 4 HOH B 20 720 5 HOH HOH . 
K 4 HOH B 21 721 65 HOH HOH . 
K 4 HOH B 22 722 78 HOH HOH . 
K 4 HOH B 23 723 13 HOH HOH . 
K 4 HOH B 24 724 11 HOH HOH . 
K 4 HOH B 25 725 87 HOH HOH . 
K 4 HOH B 26 726 17 HOH HOH . 
K 4 HOH B 27 727 15 HOH HOH . 
K 4 HOH B 28 728 77 HOH HOH . 
K 4 HOH B 29 729 25 HOH HOH . 
K 4 HOH B 30 730 67 HOH HOH . 
K 4 HOH B 31 731 22 HOH HOH . 
K 4 HOH B 32 732 12 HOH HOH . 
K 4 HOH B 33 733 73 HOH HOH . 
K 4 HOH B 34 734 38 HOH HOH . 
K 4 HOH B 35 735 75 HOH HOH . 
K 4 HOH B 36 736 3 HOH HOH . 
K 4 HOH B 37 737 98 HOH HOH . 
K 4 HOH B 38 738 35 HOH HOH . 
K 4 HOH B 39 739 89 HOH HOH . 
K 4 HOH B 40 740 74 HOH HOH . 
K 4 HOH B 41 741 19 HOH HOH . 
K 4 HOH B 42 742 82 HOH HOH . 
K 4 HOH B 43 743 43 HOH HOH . 
K 4 HOH B 44 744 94 HOH HOH . 
K 4 HOH B 45 745 88 HOH HOH . 
K 4 HOH B 46 746 8 HOH HOH . 
K 4 HOH B 47 747 50 HOH HOH . 
K 4 HOH B 48 748 70 HOH HOH . 
K 4 HOH B 49 749 86 HOH HOH . 
K 4 HOH B 50 750 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 IGT . . . I 3 24.25 -40.677 13.798 1 26.42 ? C10 IGT 604 B 1 
HETATM 2 C C01 IGT . . . I 3 26.759 -40.317 13.794 1 28.2 ? C01 IGT 604 B 1 
HETATM 3 C C03 IGT . . . I 3 25.83 -42.626 14.248 1 24.55 ? C03 IGT 604 B 1 
HETATM 4 C C06 IGT . . . I 3 23.313 -43.042 14.254 1 23.68 ? C06 IGT 604 B 1 
HETATM 5 C C07 IGT . . . I 3 22.14 -44.004 14.405 1 23.04 ? C07 IGT 604 B 1 
HETATM 6 C C08 IGT . . . I 3 23.08 -41.602 13.95 1 23.22 ? C08 IGT 604 B 1 
HETATM 7 N N02 IGT . . . I 3 25.606 -41.189 13.952 1 27.47 ? N02 IGT 604 B 1 
HETATM 8 N N05 IGT . . . I 3 24.673 -43.536 14.385 1 22.44 ? N05 IGT 604 B 1 
HETATM 9 N N09 IGT . . . I 3 21.73 -41.088 13.82 1 21.94 ? N09 IGT 604 B 1 
HETATM 10 O O04 IGT . . . I 3 26.929 -43.042 14.366 1 25.58 ? O04 IGT 604 B 1 
HETATM 11 O O11 IGT . . . I 3 24.064 -39.525 13.557 1 25.35 ? O11 IGT 604 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           11 
#