data_7Z99
#
_model_server_result.job_id            aEpXxxV098Vq0A4PhyWC7A 
_model_server_result.datetime_utc      '2024-12-02 20:43:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7z99 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    7Z99 
#
_exptl.entry_id    7Z99 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     'The crystals were incubated with a racemic mixture of methyl phenyl sulfoxide. only (s)-methyl phenyl sulfoxide is modelled in this coordinate file. Both configurations, (r) and (s), can be modeled each in the three low-energy rotamers of the -S(=O)CH3 group into the electron density with comparable fit.' 
_entity.formula_weight              140.203 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(S)-methylsulfinyl]benzene' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7Z99 
_cell.length_a            93.468 
_cell.length_b            93.468 
_cell.length_c            110.316 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Z99 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C7 H8 O S' 
_chem_comp.formula_weight    140.203 
_chem_comp.id                IH0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(S)-methylsulfinyl]benzene' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(S)-methyl phenylsulfoxide' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C5 IH0 doub 243 n y 
C4 C3 IH0 sing 244 n y 
C5 C6 IH0 sing 245 n y 
C3 C2 IH0 doub 246 n y 
C6 C1 IH0 doub 247 n y 
C2 C1 IH0 sing 248 n y 
C1 S IH0 sing 249 n n 
C S IH0 sing 250 n n 
S O IH0 doub 251 n n 
C H1 IH0 sing 252 n n 
C H2 IH0 sing 253 n n 
C H3 IH0 sing 254 n n 
C2 H5 IH0 sing 255 n n 
C3 H6 IH0 sing 256 n n 
C4 H7 IH0 sing 257 n n 
C5 H8 IH0 sing 258 n n 
C6 H9 IH0 sing 259 n n 
#
_atom_sites.entry_id                     7Z99 
_atom_sites.fract_transf_matrix[1][1]    0.010699 
_atom_sites.fract_transf_matrix[1][2]    0.006177 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012354 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009065 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FAD A 1 501 501 FAD FAD . 
C 3 IH0 A 1 502 601 IH0 MPS . 
D 3 IH0 A 1 503 602 IH0 MPS . 
E 4 HOH A 1 601 200 HOH HOH . 
E 4 HOH A 2 602 135 HOH HOH . 
E 4 HOH A 3 603 226 HOH HOH . 
E 4 HOH A 4 604 239 HOH HOH . 
E 4 HOH A 5 605 191 HOH HOH . 
E 4 HOH A 6 606 275 HOH HOH . 
E 4 HOH A 7 607 55 HOH HOH . 
E 4 HOH A 8 608 194 HOH HOH . 
E 4 HOH A 9 609 245 HOH HOH . 
E 4 HOH A 10 610 44 HOH HOH . 
E 4 HOH A 11 611 123 HOH HOH . 
E 4 HOH A 12 612 214 HOH HOH . 
E 4 HOH A 13 613 72 HOH HOH . 
E 4 HOH A 14 614 257 HOH HOH . 
E 4 HOH A 15 615 100 HOH HOH . 
E 4 HOH A 16 616 54 HOH HOH . 
E 4 HOH A 17 617 90 HOH HOH . 
E 4 HOH A 18 618 13 HOH HOH . 
E 4 HOH A 19 619 205 HOH HOH . 
E 4 HOH A 20 620 215 HOH HOH . 
E 4 HOH A 21 621 35 HOH HOH . 
E 4 HOH A 22 622 61 HOH HOH . 
E 4 HOH A 23 623 212 HOH HOH . 
E 4 HOH A 24 624 251 HOH HOH . 
E 4 HOH A 25 625 96 HOH HOH . 
E 4 HOH A 26 626 99 HOH HOH . 
E 4 HOH A 27 627 216 HOH HOH . 
E 4 HOH A 28 628 21 HOH HOH . 
E 4 HOH A 29 629 188 HOH HOH . 
E 4 HOH A 30 630 25 HOH HOH . 
E 4 HOH A 31 631 270 HOH HOH . 
E 4 HOH A 32 632 179 HOH HOH . 
E 4 HOH A 33 633 115 HOH HOH . 
E 4 HOH A 34 634 119 HOH HOH . 
E 4 HOH A 35 635 247 HOH HOH . 
E 4 HOH A 36 636 190 HOH HOH . 
E 4 HOH A 37 637 186 HOH HOH . 
E 4 HOH A 38 638 175 HOH HOH . 
E 4 HOH A 39 639 65 HOH HOH . 
E 4 HOH A 40 640 16 HOH HOH . 
E 4 HOH A 41 641 167 HOH HOH . 
E 4 HOH A 42 642 137 HOH HOH . 
E 4 HOH A 43 643 78 HOH HOH . 
E 4 HOH A 44 644 23 HOH HOH . 
E 4 HOH A 45 645 47 HOH HOH . 
E 4 HOH A 46 646 18 HOH HOH . 
E 4 HOH A 47 647 3 HOH HOH . 
E 4 HOH A 48 648 80 HOH HOH . 
E 4 HOH A 49 649 152 HOH HOH . 
E 4 HOH A 50 650 244 HOH HOH . 
E 4 HOH A 51 651 169 HOH HOH . 
E 4 HOH A 52 652 29 HOH HOH . 
E 4 HOH A 53 653 241 HOH HOH . 
E 4 HOH A 54 654 87 HOH HOH . 
E 4 HOH A 55 655 170 HOH HOH . 
E 4 HOH A 56 656 254 HOH HOH . 
E 4 HOH A 57 657 111 HOH HOH . 
E 4 HOH A 58 658 172 HOH HOH . 
E 4 HOH A 59 659 57 HOH HOH . 
E 4 HOH A 60 660 110 HOH HOH . 
E 4 HOH A 61 661 117 HOH HOH . 
E 4 HOH A 62 662 89 HOH HOH . 
E 4 HOH A 63 663 121 HOH HOH . 
E 4 HOH A 64 664 211 HOH HOH . 
E 4 HOH A 65 665 263 HOH HOH . 
E 4 HOH A 66 666 85 HOH HOH . 
E 4 HOH A 67 667 69 HOH HOH . 
E 4 HOH A 68 668 133 HOH HOH . 
E 4 HOH A 69 669 104 HOH HOH . 
E 4 HOH A 70 670 164 HOH HOH . 
E 4 HOH A 71 671 62 HOH HOH . 
E 4 HOH A 72 672 14 HOH HOH . 
E 4 HOH A 73 673 63 HOH HOH . 
E 4 HOH A 74 674 103 HOH HOH . 
E 4 HOH A 75 675 50 HOH HOH . 
E 4 HOH A 76 676 33 HOH HOH . 
E 4 HOH A 77 677 42 HOH HOH . 
E 4 HOH A 78 678 79 HOH HOH . 
E 4 HOH A 79 679 4 HOH HOH . 
E 4 HOH A 80 680 108 HOH HOH . 
E 4 HOH A 81 681 267 HOH HOH . 
E 4 HOH A 82 682 32 HOH HOH . 
E 4 HOH A 83 683 255 HOH HOH . 
E 4 HOH A 84 684 60 HOH HOH . 
E 4 HOH A 85 685 131 HOH HOH . 
E 4 HOH A 86 686 163 HOH HOH . 
E 4 HOH A 87 687 222 HOH HOH . 
E 4 HOH A 88 688 31 HOH HOH . 
E 4 HOH A 89 689 37 HOH HOH . 
E 4 HOH A 90 690 125 HOH HOH . 
E 4 HOH A 91 691 9 HOH HOH . 
E 4 HOH A 92 692 48 HOH HOH . 
E 4 HOH A 93 693 157 HOH HOH . 
E 4 HOH A 94 694 2 HOH HOH . 
E 4 HOH A 95 695 107 HOH HOH . 
E 4 HOH A 96 696 238 HOH HOH . 
E 4 HOH A 97 697 120 HOH HOH . 
E 4 HOH A 98 698 5 HOH HOH . 
E 4 HOH A 99 699 91 HOH HOH . 
E 4 HOH A 100 700 7 HOH HOH . 
E 4 HOH A 101 701 213 HOH HOH . 
E 4 HOH A 102 702 173 HOH HOH . 
E 4 HOH A 103 703 143 HOH HOH . 
E 4 HOH A 104 704 10 HOH HOH . 
E 4 HOH A 105 705 27 HOH HOH . 
E 4 HOH A 106 706 189 HOH HOH . 
E 4 HOH A 107 707 45 HOH HOH . 
E 4 HOH A 108 708 53 HOH HOH . 
E 4 HOH A 109 709 102 HOH HOH . 
E 4 HOH A 110 710 51 HOH HOH . 
E 4 HOH A 111 711 116 HOH HOH . 
E 4 HOH A 112 712 269 HOH HOH . 
E 4 HOH A 113 713 86 HOH HOH . 
E 4 HOH A 114 714 67 HOH HOH . 
E 4 HOH A 115 715 140 HOH HOH . 
E 4 HOH A 116 716 39 HOH HOH . 
E 4 HOH A 117 717 1 HOH HOH . 
E 4 HOH A 118 718 266 HOH HOH . 
E 4 HOH A 119 719 261 HOH HOH . 
E 4 HOH A 120 720 176 HOH HOH . 
E 4 HOH A 121 721 92 HOH HOH . 
E 4 HOH A 122 722 155 HOH HOH . 
E 4 HOH A 123 723 134 HOH HOH . 
E 4 HOH A 124 724 30 HOH HOH . 
E 4 HOH A 125 725 95 HOH HOH . 
E 4 HOH A 126 726 221 HOH HOH . 
E 4 HOH A 127 727 159 HOH HOH . 
E 4 HOH A 128 728 6 HOH HOH . 
E 4 HOH A 129 729 59 HOH HOH . 
E 4 HOH A 130 730 122 HOH HOH . 
E 4 HOH A 131 731 84 HOH HOH . 
E 4 HOH A 132 732 106 HOH HOH . 
E 4 HOH A 133 733 201 HOH HOH . 
E 4 HOH A 134 734 276 HOH HOH . 
E 4 HOH A 135 735 22 HOH HOH . 
E 4 HOH A 136 736 268 HOH HOH . 
E 4 HOH A 137 737 168 HOH HOH . 
E 4 HOH A 138 738 136 HOH HOH . 
E 4 HOH A 139 739 182 HOH HOH . 
E 4 HOH A 140 740 34 HOH HOH . 
E 4 HOH A 141 741 52 HOH HOH . 
E 4 HOH A 142 742 12 HOH HOH . 
E 4 HOH A 143 743 46 HOH HOH . 
E 4 HOH A 144 744 88 HOH HOH . 
E 4 HOH A 145 745 220 HOH HOH . 
E 4 HOH A 146 746 139 HOH HOH . 
E 4 HOH A 147 747 56 HOH HOH . 
E 4 HOH A 148 748 8 HOH HOH . 
E 4 HOH A 149 749 68 HOH HOH . 
E 4 HOH A 150 750 41 HOH HOH . 
E 4 HOH A 151 751 74 HOH HOH . 
E 4 HOH A 152 752 64 HOH HOH . 
E 4 HOH A 153 753 40 HOH HOH . 
E 4 HOH A 154 754 160 HOH HOH . 
E 4 HOH A 155 755 101 HOH HOH . 
E 4 HOH A 156 756 204 HOH HOH . 
E 4 HOH A 157 757 258 HOH HOH . 
E 4 HOH A 158 758 26 HOH HOH . 
E 4 HOH A 159 759 217 HOH HOH . 
E 4 HOH A 160 760 28 HOH HOH . 
E 4 HOH A 161 761 130 HOH HOH . 
E 4 HOH A 162 762 234 HOH HOH . 
E 4 HOH A 163 763 171 HOH HOH . 
E 4 HOH A 164 764 24 HOH HOH . 
E 4 HOH A 165 765 197 HOH HOH . 
E 4 HOH A 166 766 158 HOH HOH . 
E 4 HOH A 167 767 36 HOH HOH . 
E 4 HOH A 168 768 20 HOH HOH . 
E 4 HOH A 169 769 81 HOH HOH . 
E 4 HOH A 170 770 118 HOH HOH . 
E 4 HOH A 171 771 249 HOH HOH . 
E 4 HOH A 172 772 154 HOH HOH . 
E 4 HOH A 173 773 183 HOH HOH . 
E 4 HOH A 174 774 77 HOH HOH . 
E 4 HOH A 175 775 129 HOH HOH . 
E 4 HOH A 176 776 199 HOH HOH . 
E 4 HOH A 177 777 162 HOH HOH . 
E 4 HOH A 178 778 218 HOH HOH . 
E 4 HOH A 179 779 203 HOH HOH . 
E 4 HOH A 180 780 82 HOH HOH . 
E 4 HOH A 181 781 124 HOH HOH . 
E 4 HOH A 182 782 113 HOH HOH . 
E 4 HOH A 183 783 265 HOH HOH . 
E 4 HOH A 184 784 187 HOH HOH . 
E 4 HOH A 185 785 58 HOH HOH . 
E 4 HOH A 186 786 71 HOH HOH . 
E 4 HOH A 187 787 161 HOH HOH . 
E 4 HOH A 188 788 73 HOH HOH . 
E 4 HOH A 189 789 209 HOH HOH . 
E 4 HOH A 190 790 206 HOH HOH . 
E 4 HOH A 191 791 193 HOH HOH . 
E 4 HOH A 192 792 259 HOH HOH . 
E 4 HOH A 193 793 260 HOH HOH . 
E 4 HOH A 194 794 228 HOH HOH . 
E 4 HOH A 195 795 229 HOH HOH . 
E 4 HOH A 196 796 165 HOH HOH . 
E 4 HOH A 197 797 196 HOH HOH . 
E 4 HOH A 198 798 174 HOH HOH . 
E 4 HOH A 199 799 253 HOH HOH . 
E 4 HOH A 200 800 219 HOH HOH . 
E 4 HOH A 201 801 76 HOH HOH . 
E 4 HOH A 202 802 151 HOH HOH . 
E 4 HOH A 203 803 149 HOH HOH . 
E 4 HOH A 204 804 262 HOH HOH . 
E 4 HOH A 205 805 19 HOH HOH . 
E 4 HOH A 206 806 230 HOH HOH . 
E 4 HOH A 207 807 127 HOH HOH . 
E 4 HOH A 208 808 11 HOH HOH . 
E 4 HOH A 209 809 264 HOH HOH . 
E 4 HOH A 210 810 132 HOH HOH . 
E 4 HOH A 211 811 240 HOH HOH . 
E 4 HOH A 212 812 224 HOH HOH . 
E 4 HOH A 213 813 49 HOH HOH . 
E 4 HOH A 214 814 15 HOH HOH . 
E 4 HOH A 215 815 248 HOH HOH . 
E 4 HOH A 216 816 150 HOH HOH . 
E 4 HOH A 217 817 126 HOH HOH . 
E 4 HOH A 218 818 66 HOH HOH . 
E 4 HOH A 219 819 105 HOH HOH . 
E 4 HOH A 220 820 112 HOH HOH . 
E 4 HOH A 221 821 83 HOH HOH . 
E 4 HOH A 222 822 227 HOH HOH . 
E 4 HOH A 223 823 225 HOH HOH . 
E 4 HOH A 224 824 252 HOH HOH . 
E 4 HOH A 225 825 153 HOH HOH . 
E 4 HOH A 226 826 236 HOH HOH . 
E 4 HOH A 227 827 148 HOH HOH . 
E 4 HOH A 228 828 242 HOH HOH . 
E 4 HOH A 229 829 192 HOH HOH . 
E 4 HOH A 230 830 180 HOH HOH . 
E 4 HOH A 231 831 207 HOH HOH . 
E 4 HOH A 232 832 184 HOH HOH . 
E 4 HOH A 233 833 17 HOH HOH . 
E 4 HOH A 234 834 246 HOH HOH . 
E 4 HOH A 235 835 250 HOH HOH . 
E 4 HOH A 236 836 198 HOH HOH . 
E 4 HOH A 237 837 223 HOH HOH . 
E 4 HOH A 238 838 128 HOH HOH . 
E 4 HOH A 239 839 144 HOH HOH . 
E 4 HOH A 240 840 273 HOH HOH . 
E 4 HOH A 241 841 185 HOH HOH . 
E 4 HOH A 242 842 235 HOH HOH . 
E 4 HOH A 243 843 231 HOH HOH . 
E 4 HOH A 244 844 147 HOH HOH . 
E 4 HOH A 245 845 178 HOH HOH . 
E 4 HOH A 246 846 181 HOH HOH . 
E 4 HOH A 247 847 94 HOH HOH . 
E 4 HOH A 248 848 156 HOH HOH . 
E 4 HOH A 249 849 271 HOH HOH . 
E 4 HOH A 250 850 98 HOH HOH . 
E 4 HOH A 251 851 177 HOH HOH . 
E 4 HOH A 252 852 141 HOH HOH . 
E 4 HOH A 253 853 237 HOH HOH . 
E 4 HOH A 254 854 109 HOH HOH . 
E 4 HOH A 255 855 277 HOH HOH . 
E 4 HOH A 256 856 195 HOH HOH . 
E 4 HOH A 257 857 243 HOH HOH . 
E 4 HOH A 258 858 146 HOH HOH . 
E 4 HOH A 259 859 145 HOH HOH . 
E 4 HOH A 260 860 278 HOH HOH . 
E 4 HOH A 261 861 142 HOH HOH . 
E 4 HOH A 262 862 114 HOH HOH . 
E 4 HOH A 263 863 93 HOH HOH . 
E 4 HOH A 264 864 97 HOH HOH . 
E 4 HOH A 265 865 274 HOH HOH . 
E 4 HOH A 266 866 272 HOH HOH . 
E 4 HOH A 267 867 210 HOH HOH . 
E 4 HOH A 268 868 232 HOH HOH . 
E 4 HOH A 269 869 208 HOH HOH . 
E 4 HOH A 270 870 233 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C IH0 . . . C 3 11.646 62.12 10.514 0.94 39.75 ? C IH0 502 A 1 
HETATM 2 O O IH0 . . . C 3 13.929 62.021 11.599 0.94 45.39 ? O IH0 502 A 1 
HETATM 3 C C1 IH0 . . . C 3 13.494 60.964 9.232 0.94 32.55 ? C1 IH0 502 A 1 
HETATM 4 C C2 IH0 . . . C 3 14.191 62.008 8.636 0.94 36.79 ? C2 IH0 502 A 1 
HETATM 5 C C3 IH0 . . . C 3 14.635 61.869 7.335 0.94 33.2 ? C3 IH0 502 A 1 
HETATM 6 C C4 IH0 . . . C 3 14.388 60.702 6.635 0.94 30.15 ? C4 IH0 502 A 1 
HETATM 7 C C5 IH0 . . . C 3 13.69 59.672 7.236 0.94 25.74 ? C5 IH0 502 A 1 
HETATM 8 C C6 IH0 . . . C 3 13.236 59.797 8.54 0.94 25.24 ? C6 IH0 502 A 1 
HETATM 9 S S IH0 . . . C 3 12.928 61.12 10.928 0.94 43.75 ? S IH0 502 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#